RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	MET28	P40573	187 aa		4.1	□□□□□ -1.75
TRP4	YDR354W	SEC27	P41811	889 aa	Known RBP	4.1	□□□□□ -1.75
TRP4	YDR354W	RSC1	P53236	928 aa		4.1	□□□□□ -1.75
TRP4	YDR354W	BRR1	Q99177	341 aa	Predicted RBP	4.1	□□□□□ -1.75
TRP4	YDR354W	HIP1	P06775	603 aa		4.09	□□□□□ -1.75
TRP4	YDR354W	CHS1	P08004	1131 aa		4.09	□□□□□ -1.75
TRP4	YDR354W	CST26	P38226	397 aa		4.09	□□□□□ -1.75
TRP4	YDR354W	RFS1	P38234	210 aa	Known RBP	4.09	□□□□□ -1.75
TRP4	YDR354W	YMR147W	P40218	223 aa	Known RBP	4.09	□□□□□ -1.75
TRP4	YDR354W	YIL067C	P40514	678 aa		4.09	□□□□□ -1.75
TRP4	YDR354W	RMD8	P43620	662 aa		4.09	□□□□□ -1.75
TRP4	YDR354W	YGL242C	P53066	181 aa		4.09	□□□□□ -1.75
TRP4	YDR354W	YOR387C	Q08910	206 aa		4.09	□□□□□ -1.75
TRP4	YDR354W	RPO41	P13433	1351 aa	Known RBP	4.08	□□□□□ -1.76
TRP4	YDR354W	MSP1	P28737	362 aa		4.08	□□□□□ -1.76
TRP4	YDR354W	NDI1	P32340	513 aa		4.08	□□□□□ -1.76
TRP4	YDR354W	RXT2	P38255	430 aa		4.08	□□□□□ -1.76
TRP4	YDR354W	RRT5	P43607	289 aa		4.08	□□□□□ -1.76
TRP4	YDR354W	OCA1	P50946	238 aa	Predicted RBP	4.08	□□□□□ -1.76
TRP4	YDR354W	BTN2	P53286	410 aa		4.08	□□□□□ -1.76
TRP4	YDR354W	TAP42	Q04372	366 aa		4.08	□□□□□ -1.76
TRP4	YDR354W	MED1	Q12321	566 aa		4.08	□□□□□ -1.76
TRP4	YDR354W	ADE6	P38972	1358 aa	Known RBP	4.07	□□□□□ -1.76
TRP4	YDR354W	ROM2	P51862	1356 aa	Known RBP	4.07	□□□□□ -1.76
TRP4	YDR354W	GLC7	P32598	312 aa	Known RBP	4.07	□□□□□ -1.76
TRP4	YDR354W	VMA8	P32610	256 aa	Known RBP	4.07	□□□□□ -1.76
TRP4	YDR354W	ISC1	P40015	477 aa	Known RBP	4.07	□□□□□ -1.76
TRP4	YDR354W	ESL1	P40456	1118 aa		4.07	□□□□□ -1.76
TRP4	YDR354W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
TRP4	YDR354W	TCB2	P48231	1178 aa		4.07	□□□□□ -1.76
TRP4	YDR354W	YGR016W	P53209	190 aa		4.07	□□□□□ -1.76
TRP4	YDR354W	ART5	P53244	586 aa	Known RBP	4.07	□□□□□ -1.76
TRP4	YDR354W	CAF40	P53829	373 aa		4.07	□□□□□ -1.76
TRP4	YDR354W	TIM10	P87108	93 aa		4.07	□□□□□ -1.76
TRP4	YDR354W	RPT6	Q01939	405 aa	Known RBP	4.07	□□□□□ -1.76
TRP4	YDR354W	VTI1	Q04338	217 aa		4.07	□□□□□ -1.76
TRP4	YDR354W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
TRP4	YDR354W	SEC39	Q12745	709 aa		4.07	□□□□□ -1.76
TRP4	YDR354W	OCA4	P25366	362 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	LDB16	P25587	256 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	NAM9	P27929	486 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	DEG1	P31115	442 aa	Known RBP	4.06	□□□□□ -1.76
TRP4	YDR354W	IMP2'	P32351	346 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	NDT80	P38830	627 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	SPO22	P40511	975 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	YFL067W	P43537	175 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	SHE10	P53075	577 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	GRX3	Q03835	250 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	HEL2	Q05580	639 aa	Known RBP	4.06	□□□□□ -1.76
TRP4	YDR354W	MRD1	Q06106	887 aa	Known RBP	4.06	□□□□□ -1.76
TRP4	YDR354W	THP3	Q12049	470 aa	Known RBP	4.06	□□□□□ -1.76
TRP4	YDR354W	SGT2	Q12118	346 aa	Known RBP	4.06	□□□□□ -1.76
TRP4	YDR354W	RRD2	Q12461	358 aa		4.06	□□□□□ -1.76
TRP4	YDR354W	LEU4	P06208	619 aa	Known RBP	4.05	□□□□□ -1.76
TRP4	YDR354W	NAT1	P12945	854 aa	Known RBP	4.05	□□□□□ -1.76
TRP4	YDR354W	HEM15	P16622	393 aa		4.05	□□□□□ -1.76
TRP4	YDR354W	YCR100C	P25606	316 aa		4.05	□□□□□ -1.76
TRP4	YDR354W	URB2	P47108	1174 aa		4.05	□□□□□ -1.76
TRP4	YDR354W	YGL108C	P53139	140 aa		4.05	□□□□□ -1.76
TRP4	YDR354W	POP6	P53218	158 aa		4.05	□□□□□ -1.76
TRP4	YDR354W	TWF1	P53250	332 aa		4.05	□□□□□ -1.76
TRP4	YDR354W	CEX1	Q12453	761 aa		4.05	□□□□□ -1.76
TRP4	YDR354W	QCR6	P00127	147 aa		4.04	□□□□□ -1.76
TRP4	YDR354W	SPT15	P13393	240 aa	Known RBP	4.04	□□□□□ -1.76
TRP4	YDR354W	FUR1	P18562	216 aa	Known RBP	4.04	□□□□□ -1.76
TRP4	YDR354W	YBL059W	P34224	193 aa		4.04	□□□□□ -1.76
TRP4	YDR354W	MRPL4	P36517	319 aa		4.04	□□□□□ -1.76
TRP4	YDR354W	NAT2	P37293	288 aa		4.04	□□□□□ -1.76
TRP4	YDR354W	KTR5	P53966	522 aa	Predicted RBP	4.04	□□□□□ -1.76
TRP4	YDR354W	ELP3	Q02908	557 aa	Known RBP	4.04	□□□□□ -1.76
TRP4	YDR354W	ADD37	Q03233	198 aa		4.04	□□□□□ -1.76
TRP4	YDR354W	PBA1	Q05778	276 aa		4.04	□□□□□ -1.76
TRP4	YDR354W	ERV2	Q12284	196 aa		4.04	□□□□□ -1.76
TRP4	YDR354W	RRP12	Q12754	1228 aa	Known RBP	4.04	□□□□□ -1.76
TRP4	YDR354W	ARG3	P05150	338 aa		4.03	□□□□□ -1.76
TRP4	YDR354W	PMT1	P33775	817 aa		4.03	□□□□□ -1.76
TRP4	YDR354W	CBP4	P37267	147 aa		4.03	□□□□□ -1.76
TRP4	YDR354W	POP2	P39008	433 aa		4.03	□□□□□ -1.76
TRP4	YDR354W	GPD2	P41911	440 aa	Known RBP	4.03	□□□□□ -1.76
TRP4	YDR354W	TRS85	P46944	698 aa		4.03	□□□□□ -1.76
TRP4	YDR354W	OGG1	P53397	376 aa	Predicted RBP	4.03	□□□□□ -1.76
TRP4	YDR354W	GOR1	P53839	350 aa		4.03	□□□□□ -1.76
TRP4	YDR354W	RRP9	Q06506	573 aa	Known RBP	4.03	□□□□□ -1.76
TRP4	YDR354W	RAD50	P12753	1312 aa		4.02	□□□□□ -1.77
TRP4	YDR354W	STF1	P01098	86 aa		4.02	□□□□□ -1.77
TRP4	YDR354W	MRP7	P12687	371 aa		4.02	□□□□□ -1.77
TRP4	YDR354W	YIM1	P28625	365 aa		4.02	□□□□□ -1.77
TRP4	YDR354W	THI2	P38141	450 aa		4.02	□□□□□ -1.77
TRP4	YDR354W	ESA1	Q08649	445 aa		4.02	□□□□□ -1.77
TRP4	YDR354W	ATG29	Q12092	213 aa		4.02	□□□□□ -1.77
TRP4	YDR354W	TMS1	Q12116	473 aa		4.02	□□□□□ -1.77
TRP4	YDR354W	LYS2	P07702	1392 aa		4.02	□□□□□ -1.77
TRP4	YDR354W	YAR066W	P0CX18	203 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	YHR214W	P0CX19	203 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	SAM1	P10659	382 aa	Known RBP	4.01	□□□□□ -1.77
TRP4	YDR354W	ATP10	P18496	279 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	SAM2	P19358	384 aa	Known RBP	4.01	□□□□□ -1.77
TRP4	YDR354W	CPR4	P25334	318 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	CRM1	P30822	1084 aa	Known RBP	4.01	□□□□□ -1.77
TRP4	YDR354W	AFG1	P32317	509 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms