RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C ARK1P53974 638 aa4.34□□□□□ -1.71
PRP28YDR243C MRPS17Q03246 237 aaPredicted RBP4.34□□□□□ -1.71
PRP28YDR243C NBA1Q08229 501 aaKnown RBP4.34□□□□□ -1.71
PRP28YDR243C YOR378WQ08902 515 aa4.34□□□□□ -1.71
PRP28YDR243C SMF3Q12078 473 aaPredicted RBP4.34□□□□□ -1.71
PRP28YDR243C MED1Q12321 566 aa4.34□□□□□ -1.71
PRP28YDR243C PNO1Q99216 274 aaKnown RBP4.34□□□□□ -1.71
PRP28YDR243C YBR085C-AO43137 85 aa4.33□□□□□ -1.72
PRP28YDR243C PHR1P05066 565 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
PRP28YDR243C RPP2AP05319 106 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C TPK1P06244 397 aa4.33□□□□□ -1.72
PRP28YDR243C RHO1P06780 209 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C HIS5P07172 385 aa4.33□□□□□ -1.72
PRP28YDR243C CAF20P12962 161 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C MTF1P14908 341 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C URA6P15700 204 aa4.33□□□□□ -1.72
PRP28YDR243C SAN1P22470 610 aa4.33□□□□□ -1.72
PRP28YDR243C YCK2P23292 546 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C GFD2P25370 566 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C LAC1P28496 418 aa4.33□□□□□ -1.72
PRP28YDR243C SSH4P32343 579 aa4.33□□□□□ -1.72
PRP28YDR243C SIP1P32578 815 aa4.33□□□□□ -1.72
PRP28YDR243C CYS4P32582 507 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C SOF1P33750 489 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C TRM2P33753 639 aa4.33□□□□□ -1.72
PRP28YDR243C YUH1P35127 236 aa4.33□□□□□ -1.72
PRP28YDR243C NPR2P39923 615 aa4.33□□□□□ -1.72
PRP28YDR243C FIR1P40020 876 aa4.33□□□□□ -1.72
PRP28YDR243C NTA1P40354 457 aa4.33□□□□□ -1.72
PRP28YDR243C QDR1P40475 563 aa4.33□□□□□ -1.72
PRP28YDR243C SLS1P42900 643 aa4.33□□□□□ -1.72
PRP28YDR243C SNG1P46950 547 aa4.33□□□□□ -1.72
PRP28YDR243C MRK1P50873 501 aa4.33□□□□□ -1.72
PRP28YDR243C SHY1P53266 389 aa4.33□□□□□ -1.72
PRP28YDR243C NOP19P53317 196 aaPredicted RBP4.33□□□□□ -1.72
PRP28YDR243C NOG2P53742 486 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C YNR065CP53751 1116 aa4.33□□□□□ -1.72
PRP28YDR243C UTP6Q02354 440 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C NAN1Q02931 896 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C PRM15Q03262 622 aa4.33□□□□□ -1.72
PRP28YDR243C APC4Q04601 652 aa4.33□□□□□ -1.72
PRP28YDR243C YLR297WQ05899 129 aa4.33□□□□□ -1.72
PRP28YDR243C TMA10Q06177 86 aa4.33□□□□□ -1.72
PRP28YDR243C YPS7Q06325 596 aa4.33□□□□□ -1.72
PRP28YDR243C TFC6Q06339 672 aa4.33□□□□□ -1.72
PRP28YDR243C YOR283WQ12040 230 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C ATX2Q12067 313 aa4.33□□□□□ -1.72
PRP28YDR243C FAL1Q12099 399 aaKnown RBP4.33□□□□□ -1.72
PRP28YDR243C YOR114WQ12219 294 aa4.33□□□□□ -1.72
PRP28YDR243C RRP42Q12277 265 aaPredicted RBP4.33□□□□□ -1.72
PRP28YDR243C AGC1Q12482 902 aa4.33□□□□□ -1.72
PRP28YDR243C YOR019WQ99248 730 aa4.33□□□□□ -1.72
PRP28YDR243C ECM3Q99252 613 aa4.33□□□□□ -1.72
PRP28YDR243C REP2P03872 296 aa4.32□□□□□ -1.72
PRP28YDR243C MAS2P11914 482 aa4.32□□□□□ -1.72
PRP28YDR243C CAP2P13517 287 aa4.32□□□□□ -1.72
PRP28YDR243C FBA1P14540 359 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C APE2P32454 952 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C PRP21P32524 280 aaPredicted RBP4.32□□□□□ -1.72
PRP28YDR243C ABD1P32783 436 aaPredicted RBP4.32□□□□□ -1.72
PRP28YDR243C SPO23P33757 523 aa4.32□□□□□ -1.72
PRP28YDR243C TOD6P34219 525 aa4.32□□□□□ -1.72
PRP28YDR243C BET3P36149 193 aa4.32□□□□□ -1.72
PRP28YDR243C MRPL15P36523 253 aa4.32□□□□□ -1.72
PRP28YDR243C FAA2P39518 744 aa4.32□□□□□ -1.72
PRP28YDR243C YEN1P40028 759 aa4.32□□□□□ -1.72
PRP28YDR243C LCP5P40079 357 aaPredicted RBP4.32□□□□□ -1.72
PRP28YDR243C PMT4P46971 762 aa4.32□□□□□ -1.72
PRP28YDR243C CPR7P47103 393 aa4.32□□□□□ -1.72
PRP28YDR243C EFM3P47163 339 aa4.32□□□□□ -1.72
PRP28YDR243C MRX6P48564 524 aa4.32□□□□□ -1.72
PRP28YDR243C RPN14P53196 417 aa4.32□□□□□ -1.72
PRP28YDR243C STP1Q00947 519 aa4.32□□□□□ -1.72
PRP28YDR243C YPL107WQ02873 248 aa4.32□□□□□ -1.72
PRP28YDR243C YMR099CQ03161 297 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C TPP1Q03796 238 aa4.32□□□□□ -1.72
PRP28YDR243C AIM36Q03798 255 aa4.32□□□□□ -1.72
PRP28YDR243C GIS4Q04233 774 aa4.32□□□□□ -1.72
PRP28YDR243C TDA9Q04545 1251 aa4.32□□□□□ -1.72
PRP28YDR243C GSF2Q04697 403 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C MFB1Q04922 465 aa4.32□□□□□ -1.72
PRP28YDR243C MDM30Q05930 598 aa4.32□□□□□ -1.72
PRP28YDR243C ADY4Q05955 493 aa4.32□□□□□ -1.72
PRP28YDR243C CYK3Q07533 885 aa4.32□□□□□ -1.72
PRP28YDR243C RRP40Q08285 240 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C ACM1Q08981 209 aa4.32□□□□□ -1.72
PRP28YDR243C APC9Q12107 265 aa4.32□□□□□ -1.72
PRP28YDR243C NSL1Q12143 216 aa4.32□□□□□ -1.72
PRP28YDR243C ISN1Q99312 450 aa4.32□□□□□ -1.72
PRP28YDR243C Q0144Q9ZZW2 109 aa4.32□□□□□ -1.72
PRP28YDR243C BI2P03873 423 aa4.32□□□□□ -1.72
PRP28YDR243C CIT2P08679 460 aa4.32□□□□□ -1.72
PRP28YDR243C PRB1P09232 635 aa4.32□□□□□ -1.72
PRP28YDR243C COS2P0CX12 379 aa4.32□□□□□ -1.72
PRP28YDR243C COS3P0CX13 379 aa4.32□□□□□ -1.72
PRP28YDR243C HEM15P16622 393 aa4.32□□□□□ -1.72
PRP28YDR243C NAR1P23503 491 aaKnown RBP4.32□□□□□ -1.72
PRP28YDR243C ADP1P25371 1049 aa4.32□□□□□ -1.72
PRP28YDR243C GID7P25569 745 aa4.32□□□□□ -1.72
PRP28YDR243C MCM5P29496 775 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms