RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W NCE103P53615 221 aa5.52□□□□□ -1.53
VMS1YDR049W SHS1Q07657 551 aa5.52□□□□□ -1.53
VMS1YDR049W PRS5Q12265 496 aaKnown RBP5.52□□□□□ -1.53
VMS1YDR049W SIN4P32259 974 aa5.51□□□□□ -1.53
VMS1YDR049W YBR144CP34215 104 aa5.51□□□□□ -1.53
VMS1YDR049W NNK1P36003 928 aa5.51□□□□□ -1.53
VMS1YDR049W LHS1P36016 881 aa5.51□□□□□ -1.53
VMS1YDR049W SNU114P36048 1008 aaKnown RBP5.51□□□□□ -1.53
VMS1YDR049W STE24P47154 453 aa5.51□□□□□ -1.53
VMS1YDR049W ARG5,6Q01217 863 aa5.51□□□□□ -1.53
VMS1YDR049W REC102Q02721 264 aa5.51□□□□□ -1.53
VMS1YDR049W SHR3Q02774 210 aa5.51□□□□□ -1.53
VMS1YDR049W PEX12Q04370 399 aa5.51□□□□□ -1.53
VMS1YDR049W SPC24Q04477 213 aa5.51□□□□□ -1.53
VMS1YDR049W YMR310CQ04867 317 aaPredicted RBP5.51□□□□□ -1.53
VMS1YDR049W RCL1Q08096 367 aaPredicted RBP5.51□□□□□ -1.53
VMS1YDR049W ESA1Q08649 445 aa5.51□□□□□ -1.53
VMS1YDR049W STU1P38198 1513 aa5.51□□□□□ -1.53
VMS1YDR049W PUT2P07275 575 aa5.51□□□□□ -1.53
VMS1YDR049W MAS1P10507 462 aa5.51□□□□□ -1.53
VMS1YDR049W TUP1P16649 713 aa5.51□□□□□ -1.53
VMS1YDR049W STE18P18852 110 aa5.51□□□□□ -1.53
VMS1YDR049W VPS1P21576 704 aaKnown RBP5.51□□□□□ -1.53
VMS1YDR049W CBT1P36038 271 aaPredicted RBP5.51□□□□□ -1.53
VMS1YDR049W DBP7P36120 742 aaKnown RBP5.51□□□□□ -1.53
VMS1YDR049W FIG1P38224 298 aa5.51□□□□□ -1.53
VMS1YDR049W VMA22P38784 181 aa5.51□□□□□ -1.53
VMS1YDR049W YGR127WP53275 312 aa5.51□□□□□ -1.53
VMS1YDR049W MRPL50P53724 139 aa5.51□□□□□ -1.53
VMS1YDR049W EFM6P53970 246 aa5.51□□□□□ -1.53
VMS1YDR049W CTF19Q02732 369 aa5.51□□□□□ -1.53
VMS1YDR049W NSE1Q07913 336 aa5.51□□□□□ -1.53
VMS1YDR049W BAG7Q12128 409 aa5.51□□□□□ -1.53
VMS1YDR049W MSH5Q12175 901 aa5.51□□□□□ -1.53
VMS1YDR049W YDR262WQ12331 272 aa5.51□□□□□ -1.53
VMS1YDR049W SPO24Q3E752 67 aa5.51□□□□□ -1.53
VMS1YDR049W UBA3Q99344 299 aa5.51□□□□□ -1.53
VMS1YDR049W THP2O13539 261 aaKnown RBP5.5□□□□□ -1.53
VMS1YDR049W CHS1P08004 1131 aa5.5□□□□□ -1.53
VMS1YDR049W DSF1P0CX08 502 aa5.5□□□□□ -1.53
VMS1YDR049W YNR073CP0CX09 502 aa5.5□□□□□ -1.53
VMS1YDR049W COS9P36034 407 aa5.5□□□□□ -1.53
VMS1YDR049W PRP39P39682 629 aaKnown RBP5.5□□□□□ -1.53
VMS1YDR049W BUR6P40096 142 aa5.5□□□□□ -1.53
VMS1YDR049W SNX4P47057 423 aa5.5□□□□□ -1.53
VMS1YDR049W YGL117WP53133 265 aa5.5□□□□□ -1.53
VMS1YDR049W EBS1Q03466 884 aaKnown RBP5.5□□□□□ -1.53
VMS1YDR049W YMR160WQ03823 816 aa5.5□□□□□ -1.53
VMS1YDR049W AIM33Q04516 312 aa5.5□□□□□ -1.53
VMS1YDR049W DNL4Q08387 944 aaPredicted RBP5.5□□□□□ -1.53
VMS1YDR049W PRP46Q12417 451 aaPredicted RBP5.5□□□□□ -1.53
VMS1YDR049W AI5_BETAQ9ZZX0 354 aa5.5□□□□□ -1.53
VMS1YDR049W SPS4P09937 338 aa5.49□□□□□ -1.53
VMS1YDR049W RPS16AP0CX51 143 aaKnown RBP5.49□□□□□ -1.53
VMS1YDR049W RPS16BP0CX52 143 aaKnown RBP5.49□□□□□ -1.53
VMS1YDR049W REV1P12689 985 aa5.49□□□□□ -1.53
VMS1YDR049W KIN82P25341 720 aa5.49□□□□□ -1.53
VMS1YDR049W DCG1P32460 244 aa5.49□□□□□ -1.53
VMS1YDR049W GSH1P32477 678 aa5.49□□□□□ -1.53
VMS1YDR049W ECM25P32525 599 aa5.49□□□□□ -1.53
VMS1YDR049W SKT5P34226 696 aa5.49□□□□□ -1.53
VMS1YDR049W PCA1P38360 1216 aa5.49□□□□□ -1.53
VMS1YDR049W MMS21P38632 267 aa5.49□□□□□ -1.53
VMS1YDR049W BIG1P38813 335 aa5.49□□□□□ -1.53
VMS1YDR049W YHR122WP38829 231 aa5.49□□□□□ -1.53
VMS1YDR049W SPG5P42933 373 aa5.49□□□□□ -1.53
VMS1YDR049W SCD6P45978 349 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
VMS1YDR049W YJL163CP46996 555 aa5.49□□□□□ -1.53
VMS1YDR049W SOK2P53438 785 aaPredicted RBP5.49□□□□□ -1.53
VMS1YDR049W TRM112P53738 135 aaPredicted RBP5.49□□□□□ -1.53
VMS1YDR049W FAR8Q05040 523 aa5.49□□□□□ -1.53
VMS1YDR049W YDL144CQ07589 356 aa5.49□□□□□ -1.53
VMS1YDR049W DDC1Q08949 612 aa5.49□□□□□ -1.53
VMS1YDR049W GPM2Q12008 311 aa5.49□□□□□ -1.53
VMS1YDR049W LSO2Q3E772 92 aaKnown RBP5.49□□□□□ -1.53
VMS1YDR049W YPK9Q12697 1472 aa5.49□□□□□ -1.53
VMS1YDR049W COQ4O13525 335 aa5.49□□□□□ -1.53
VMS1YDR049W RPL31BP0C2H9 113 aaKnown RBP5.49□□□□□ -1.53
VMS1YDR049W YMR085WP0CF18 432 aa5.49□□□□□ -1.53
VMS1YDR049W FRS2P15625 503 aaKnown RBP5.49□□□□□ -1.53
VMS1YDR049W ERS1P17261 260 aa5.49□□□□□ -1.53
VMS1YDR049W ART10P18634 518 aaKnown RBP5.49□□□□□ -1.53
VMS1YDR049W PRP4P20053 465 aaKnown RBP5.49□□□□□ -1.53
VMS1YDR049W GPI12P23797 304 aa5.49□□□□□ -1.53
VMS1YDR049W RRT12P25381 491 aa5.49□□□□□ -1.53
VMS1YDR049W KRE2P27809 442 aa5.49□□□□□ -1.53
VMS1YDR049W MSS51P32335 436 aa5.49□□□□□ -1.53
VMS1YDR049W VMA6P32366 345 aaKnown RBP5.49□□□□□ -1.53
VMS1YDR049W SRP102P36057 244 aaPredicted RBP5.49□□□□□ -1.53
VMS1YDR049W PRS4P38063 326 aaPredicted RBP5.49□□□□□ -1.53
VMS1YDR049W OLA1P38219 394 aaKnown RBP5.49□□□□□ -1.53
VMS1YDR049W BMT2P38278 337 aa5.49□□□□□ -1.53
VMS1YDR049W SPP381P38282 291 aaPredicted RBP5.49□□□□□ -1.53
VMS1YDR049W YHR078WP38799 552 aa5.49□□□□□ -1.53
VMS1YDR049W FMO1P38866 432 aa5.49□□□□□ -1.53
VMS1YDR049W SHC1P39000 512 aa5.49□□□□□ -1.53
VMS1YDR049W SOK1P40317 901 aa5.49□□□□□ -1.53
VMS1YDR049W PRK1P40494 810 aa5.49□□□□□ -1.53
VMS1YDR049W TFG2P41896 400 aaPredicted RBP5.49□□□□□ -1.53
VMS1YDR049W SWP82P43554 623 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms