RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	CDC23	P16522	626 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	WSS1	P38838	269 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	YAL037W	P39728	267 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	GAT2	P40209	560 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	YPS6	P40583	537 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	DIM1	P41819	318 aa	Known RBP	2.12	□□□□□ -2.07
NCL1	YBL024W	ROG1	P53118	685 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	PIB2	P53191	635 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	GPI15	P53961	229 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	TAF12	Q03761	539 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	NDL1	Q06568	189 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	BUG1	Q12191	341 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	ORT1	Q12375	292 aa		2.12	□□□□□ -2.07
NCL1	YBL024W	RPL6B	P05739	176 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	IMA3	P0CW40	589 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	IMA4	P0CW41	589 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	PHO84	P25297	587 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	ITR1	P30605	584 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	SMI1	P32566	505 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	RGT1	P32862	1170 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	PTR2	P32901	601 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	RSM22	P36056	628 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	MRPL4	P36517	319 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	RIM2	P38127	377 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	OLA1	P38219	394 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	STP2	P38704	541 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	NAS2	P40555	220 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	ELP2	P42935	788 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	EPL1	P43572	832 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	HMS2	P47175	358 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	PHB2	P50085	310 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	AVT4	P50944	713 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	YIP5	P53108	310 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	FRE4	P53746	719 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	RPL6A	Q02326	176 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	ODC1	Q03028	310 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	YLR281C	Q05863	155 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	DBP9	Q06218	594 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	PML1	Q07930	204 aa	Predicted RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	IMA2	Q08295	589 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	YPR022C	Q12139	1133 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	PSY3	Q12318	242 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	RMD5	Q12508	421 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	NFT1	P0CE68	1218 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	YAR066W	P0CX18	203 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	YHR214W	P0CX19	203 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	PHO91	P27514	894 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	NDI1	P32340	513 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	NDC1	P32500	655 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	GLC7	P32598	312 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	UIP5	P36137	443 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	QDR3	P38227	689 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	MTC4	P38335	694 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	LYS1	P38998	373 aa	RIP-Chip data	2.11	□□□□□ -2.07	not detected
NCL1	YBL024W	PCF11	P39081	626 aa	Predicted RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	DHH1	P39517	506 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	SHO1	P40073	367 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	CHS6	P40955	746 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	SAD1	P43589	448 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	RRT5	P43607	289 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	FYV8	P46949	817 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	MDE1	P47095	244 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	URH1	Q04179	340 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	HCR1	Q05775	265 aa	Known RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	YLL056C	Q12177	298 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	YDR061W	Q12298	539 aa		2.11	□□□□□ -2.07
NCL1	YBL024W	TFB5	Q3E7C1	72 aa	Predicted RBP	2.11	□□□□□ -2.07
NCL1	YBL024W	CHS1	P08004	1131 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	TRX1	P22217	103 aa	Known RBP	2.1	□□□□□ -2.07
NCL1	YBL024W	RAD57	P25301	460 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	HSP104	P31539	908 aa	Known RBP	2.1	□□□□□ -2.07
NCL1	YBL024W	CYS4	P32582	507 aa	Known RBP	2.1	□□□□□ -2.07
NCL1	YBL024W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.1	□□□□□ -2.07	not detected
NCL1	YBL024W	TOA1	P32773	286 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	RTT107	P38850	1070 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	POP2	P39008	433 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	RPR2	P40571	144 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	RTT101	P47050	842 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	YDR541C	Q03049	344 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	REX4	Q08237	289 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	SKI7	Q08491	747 aa	Predicted RBP	2.1	□□□□□ -2.07
NCL1	YBL024W	AYT1	Q12226	474 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	RPL15A	P05748	204 aa	Known RBP	2.1	□□□□□ -2.07
NCL1	YBL024W	MTF1	P14908	341 aa	Known RBP	2.1	□□□□□ -2.07
NCL1	YBL024W	VMA2	P16140	517 aa	Known RBP	2.1	□□□□□ -2.07
NCL1	YBL024W	SPO12	P17123	173 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	LSB5	P25369	354 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	FAA1	P30624	700 aa	Known RBP	2.1	□□□□□ -2.07
NCL1	YBL024W	YSC83	P32792	385 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	INM1	P38710	295 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	BZZ1	P38822	633 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	MNL1	P38888	796 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	CCT4	P39078	528 aa	Known RBP	2.1	□□□□□ -2.07
NCL1	YBL024W	POP6	P53218	158 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	YNR048W	P53740	393 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	YFH1	Q07540	174 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	NSE1	Q07913	336 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	DAP1	Q12091	152 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	RUP1	Q12242	671 aa		2.1	□□□□□ -2.07
NCL1	YBL024W	ATG34	Q12292	412 aa		2.1	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms