RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 GIMAP8Q8ND71 665 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 GLT1D1Q96MS3 346 aa13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 MBOAT7Q96N66 472 aa13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 FOXP1Q9H334 677 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 KIF3AQ9Y496 699 aa13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 ELP1O95163 1332 aa13.58□□□□□ -0.24
RABGGTA-218ENST00000560777 DHX15O43143 795 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 KPNA6O60684 536 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 CABYRO75952 493 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 TDP2O95551 362 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 MYL3P08590 195 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 HOXD8P13378 290 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 ATN1P54259 1190 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 DGKDQ16760 1214 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 LRRC26Q2I0M4 334 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 LETM2Q2VYF4 491 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 Q4G0T1 1027 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 LARP1BQ659C4 914 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 MOXD1Q6UVY6 613 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 NEK8Q86SG6 692 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 UIMC1Q96RL1 719 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 GPR20Q99678 358 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 HTATIP2Q9BUP3 242 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 STARD7Q9NQZ5 370 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 POLR3EQ9NVU0 708 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 GRIN2DO15399 1336 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 NFASCO94856 1347 aa13.57□□□□□ -0.24
RABGGTA-218ENST00000560777 GSTTP1A0A1W2PQM5 241 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 KIF28PB7ZC32 967 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 IPO5O00410 1097 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 MSH4O15457 936 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 U2AF2P26368 475 aaKnown RBP eCLIP13.56□□□□□ -0.242e-6■■■□□ 16.9
RABGGTA-218ENST00000560777 PSMC6P62333 389 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 SETQ01105 290 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 SNX17Q15036 470 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 C1orf53Q5VUE5 145 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 PPP4R3AQ6IN85 833 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 KAT2BQ92831 832 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 VTI1AQ96AJ9 217 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 ZNF577Q9BSK1 485 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 MTG1Q9BT17 334 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
RABGGTA-218ENST00000560777 DOCK5Q9H7D0 1870 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 NOP56O00567 594 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 WNT7AO00755 349 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 SLC37A4O43826 429 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 CCNT1O60563 726 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 CDK7P50613 346 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 SP4Q02446 784 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 ITGA7Q13683 1181 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 NOSTRINQ8IVI9 506 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 SLC43A3Q8NBI5 491 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 SEPT1Q8WYJ6 367 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 DPF3Q92784 378 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 GJA10Q969M2 543 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 SDF4Q9BRK5 362 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 C16orf70Q9BSU1 422 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 JPH1Q9HDC5 661 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 TBC1D22BQ9NU19 505 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 SLC9A2Q9UBY0 812 aa13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 DDX25Q9UHL0 483 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 TNRC18O15417 2968 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-218ENST00000560777 A0A0U1RQG5 324 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-218ENST00000560777 H3BQV1 296 aa13.54□□□□□ -0.24
RABGGTA-218ENST00000560777 ARVCFO00192 962 aa13.54□□□□□ -0.24
RABGGTA-218ENST00000560777 CCNE2O96020 404 aa13.54□□□□□ -0.24
RABGGTA-218ENST00000560777 GCFC2P16383 781 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-218ENST00000560777 SLC5A5Q92911 643 aa13.54□□□□□ -0.24
RABGGTA-218ENST00000560777 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-218ENST00000560777 DDX39AO00148 427 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 HAS3O00219 553 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 EVI5O60447 810 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 ATG7O95352 703 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 F2P00734 622 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 LGALS2P05162 132 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 ZNF286BP0CG31 522 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 TCF7P36402 384 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 RTP1P59025 263 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 ACTR2P61160 394 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 TLE2Q04725 743 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 GNL2Q13823 731 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 TRIM60Q495X7 471 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 MCTP1Q6DN14 999 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 ANKRD33Q7Z3H0 272 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 ETNPPLQ8TBG4 499 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 PPP1R13LQ8WUF5 828 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 RIT2Q99578 217 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 KCNMB3Q9NPA1 279 aa13.53□□□□□ -0.24
RABGGTA-218ENST00000560777 H3BRB1 525 aa13.52□□□□□ -0.25
RABGGTA-218ENST00000560777 PSMD10O75832 226 aa13.52□□□□□ -0.25
RABGGTA-218ENST00000560777 ATP2B1P20020 1258 aa13.52□□□□□ -0.25
RABGGTA-218ENST00000560777 PDCP20941 246 aa13.52□□□□□ -0.25
RABGGTA-218ENST00000560777 SYT1P21579 422 aa13.52□□□□□ -0.25
RABGGTA-218ENST00000560777 PSEN2P49810 448 aa13.52□□□□□ -0.25
RABGGTA-218ENST00000560777 TOB1P50616 345 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-218ENST00000560777 UTP14CQ5TAP6 766 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-218ENST00000560777 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.25
RABGGTA-218ENST00000560777 HAS1Q92839 578 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms