RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 HTATIP2Q9BUP3 242 aa18.14■□□□□ 0.49
SSBP1-214ENST00000498107 AGO4Q9HCK5 861 aaKnown RBP18.14■□□□□ 0.49
SSBP1-214ENST00000498107 TBC1D22BQ9NU19 505 aa18.14■□□□□ 0.49
SSBP1-214ENST00000498107 TCEAL9Q9UHQ7 104 aa18.14■□□□□ 0.49
SSBP1-214ENST00000498107 NOL7Q9UMY1 257 aaKnown RBP18.14■□□□□ 0.49
SSBP1-214ENST00000498107 MYADML2A6NDP7 307 aa18.13■□□□□ 0.49
SSBP1-214ENST00000498107 CCNT1O60563 726 aaKnown RBP18.13■□□□□ 0.49
SSBP1-214ENST00000498107 PPFIA4O75335 1185 aa18.13■□□□□ 0.49
SSBP1-214ENST00000498107 MMP3P08254 477 aa18.13■□□□□ 0.49
SSBP1-214ENST00000498107 COL6A1P12109 1028 aa18.13■□□□□ 0.49
SSBP1-214ENST00000498107 TRAPPC10P48553 1259 aa18.13■□□□□ 0.49
SSBP1-214ENST00000498107 MLLT1Q03111 559 aaPredicted RBP18.13■□□□□ 0.49
SSBP1-214ENST00000498107 MCTP1Q6DN14 999 aa18.13■□□□□ 0.49
SSBP1-214ENST00000498107 DIS3LQ8TF46 1054 aaKnown RBP18.13■□□□□ 0.49
SSBP1-214ENST00000498107 MBOAT7Q96N66 472 aa18.13■□□□□ 0.49
SSBP1-214ENST00000498107 SEZ6LQ9BYH1 1024 aa18.13■□□□□ 0.49
SSBP1-214ENST00000498107 SENP6Q9GZR1 1112 aaPredicted RBP18.13■□□□□ 0.49
SSBP1-214ENST00000498107 JPH1Q9HDC5 661 aaPredicted RBP18.13■□□□□ 0.49
SSBP1-214ENST00000498107 DDX25Q9UHL0 483 aaKnown RBP18.13■□□□□ 0.49
SSBP1-214ENST00000498107 ELP1O95163 1332 aa18.13■□□□□ 0.49
SSBP1-214ENST00000498107 IPO5O00410 1097 aaKnown RBP18.12■□□□□ 0.49
SSBP1-214ENST00000498107 ATP9AO75110 1047 aa18.12■□□□□ 0.49
SSBP1-214ENST00000498107 MYL3P08590 195 aa18.12■□□□□ 0.49
SSBP1-214ENST00000498107 VTI1AQ96AJ9 217 aa18.12■□□□□ 0.49
SSBP1-214ENST00000498107 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
SSBP1-214ENST00000498107 STARD7Q9NQZ5 370 aa18.12■□□□□ 0.49
SSBP1-214ENST00000498107 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
SSBP1-214ENST00000498107 PKD2L1Q9P0L9 805 aa18.12■□□□□ 0.49
SSBP1-214ENST00000498107 SLC9A2Q9UBY0 812 aa18.12■□□□□ 0.49
SSBP1-214ENST00000498107 A0A1W2PQ45 241 aaPredicted RBP18.11■□□□□ 0.49
SSBP1-214ENST00000498107 A0A1W2PQY0 241 aa18.11■□□□□ 0.49
SSBP1-214ENST00000498107 EDIL3O43854 480 aa18.11■□□□□ 0.49
SSBP1-214ENST00000498107 TDP2O95551 362 aa18.11■□□□□ 0.49
SSBP1-214ENST00000498107 HOXD8P13378 290 aaPredicted RBP18.11■□□□□ 0.49
SSBP1-214ENST00000498107 PTGS1P23219 599 aa18.11■□□□□ 0.49
SSBP1-214ENST00000498107 ORC2Q13416 577 aaPredicted RBP18.11■□□□□ 0.49
SSBP1-214ENST00000498107 HSDL1Q3SXM5 330 aa18.11■□□□□ 0.49
SSBP1-214ENST00000498107 EARS2Q5JPH6 523 aaKnown RBP18.11■□□□□ 0.49
SSBP1-214ENST00000498107 LENG9Q96B70 501 aa18.11■□□□□ 0.49
SSBP1-214ENST00000498107 TBX3O15119 743 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 MARCH6O60337 910 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 SORBS3O60504 671 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
SSBP1-214ENST00000498107 SYT1P21579 422 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 IRX5P78411 483 aaPredicted RBP18.1■□□□□ 0.49
SSBP1-214ENST00000498107 PURAQ00577 322 aaKnown RBP18.1■□□□□ 0.49
SSBP1-214ENST00000498107 ITGB3BPQ13352 177 aaPredicted RBP18.1■□□□□ 0.49
SSBP1-214ENST00000498107 CXCL17Q6UXB2 119 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 SEPT1Q8WYJ6 367 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 FERMT2Q96AC1 680 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 FAM20AQ96MK3 541 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 RIT2Q99578 217 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 GPR20Q99678 358 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 KATNAL1Q9BW62 490 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 BRCA2P51587 3418 aa18.1■□□□□ 0.49
SSBP1-214ENST00000498107 A0A0U1RQG5 324 aaPredicted RBP18.09■□□□□ 0.49
SSBP1-214ENST00000498107 VPS37CA5D8V6 355 aaPredicted RBP18.09■□□□□ 0.49
SSBP1-214ENST00000498107 FAM205CA6NFA0 338 aa18.09■□□□□ 0.49
SSBP1-214ENST00000498107 KIF28PB7ZC32 967 aa18.09■□□□□ 0.49
SSBP1-214ENST00000498107 MSH4O15457 936 aa18.09■□□□□ 0.49
SSBP1-214ENST00000498107 KRT76Q01546 638 aa18.09■□□□□ 0.49
SSBP1-214ENST00000498107 C1orf53Q5VUE5 145 aa18.09■□□□□ 0.49
SSBP1-214ENST00000498107 SLFN12Q8IYM2 578 aa18.09■□□□□ 0.49
SSBP1-214ENST00000498107 SLC5A5Q92911 643 aa18.09■□□□□ 0.49
SSBP1-214ENST00000498107 TEKT3Q9BXF9 490 aa18.09■□□□□ 0.49
SSBP1-214ENST00000498107 DOCK5Q9H7D0 1870 aa18.08■□□□□ 0.49
SSBP1-214ENST00000498107 MROH7Q68CQ1 1323 aa18.08■□□□□ 0.49
SSBP1-214ENST00000498107 GAS7O60861 476 aa18.08■□□□□ 0.48
SSBP1-214ENST00000498107 SP4Q02446 784 aa18.08■□□□□ 0.48
SSBP1-214ENST00000498107 RILPL1Q5EBL4 403 aa18.08■□□□□ 0.48
SSBP1-214ENST00000498107 LRCH2Q5VUJ6 765 aa18.08■□□□□ 0.48
SSBP1-214ENST00000498107 ZNF746Q6NUN9 644 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-214ENST00000498107 SLC39A5Q6ZMH5 540 aa18.08■□□□□ 0.48
SSBP1-214ENST00000498107 BRAPQ7Z569 592 aa18.08■□□□□ 0.48
SSBP1-214ENST00000498107 SMAP1Q8IYB5 467 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-214ENST00000498107 BCAS3Q9H6U6 928 aa18.08■□□□□ 0.48
SSBP1-214ENST00000498107 ZNF215Q9UL58 517 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-214ENST00000498107 DHX15O43143 795 aaKnown RBP18.07■□□□□ 0.48
SSBP1-214ENST00000498107 STX6O43752 255 aa18.07■□□□□ 0.48
SSBP1-214ENST00000498107 SLC37A4O43826 429 aa18.07■□□□□ 0.48
SSBP1-214ENST00000498107 NEMFO60524 1076 aa18.07■□□□□ 0.48
SSBP1-214ENST00000498107 ATP2B1P20020 1258 aa18.07■□□□□ 0.48
SSBP1-214ENST00000498107 TCF7P36402 384 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-214ENST00000498107 TTC38Q5R3I4 469 aa18.07■□□□□ 0.48
SSBP1-214ENST00000498107 ETNPPLQ8TBG4 499 aa18.07■□□□□ 0.48
SSBP1-214ENST00000498107 AZI2Q9H6S1 392 aa18.07■□□□□ 0.48
SSBP1-214ENST00000498107 KCNMB3Q9NPA1 279 aa18.07■□□□□ 0.48
SSBP1-214ENST00000498107 DDX39AO00148 427 aaKnown RBP18.06■□□□□ 0.48
SSBP1-214ENST00000498107 ARVCFO00192 962 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 F2P00734 622 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 LGALS2P05162 132 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 SFNP31947 248 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 ATN1P54259 1190 aaPredicted RBP18.06■□□□□ 0.48
SSBP1-214ENST00000498107 ACTR2P61160 394 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 ITGA7Q13683 1181 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 SNX17Q15036 470 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 CALCRLQ16602 461 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 MIS18BP1Q6P0N0 1132 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 RDM1Q8NG50 284 aa18.06■□□□□ 0.48
SSBP1-214ENST00000498107 TNPO1Q92973 898 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms