RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 NINJ1Q92982 152 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 CLUHP3Q96NS8 147 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 KCNJ15Q99712 375 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 SYT3Q9BQG1 590 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 SLC6A20Q9NP91 592 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 INTS7Q9NVH2 962 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 MAGEC2Q9UBF1 373 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 ZNF652Q9Y2D9 606 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 PCDHA9Q9Y5H5 950 aa5.33□□□□□ -1.56
TRAPPC13-204ENST00000438419 TCRBV5S2A0A599 114 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 TCRBV16S1A1N1A0A5B0 115 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 GSTA4O15217 222 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 NKRFO15226 690 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 MAFKO60675 156 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 ASLP04424 464 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 GNAT1P11488 350 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 COL6A2P12110 1019 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 PFKLP17858 780 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 FOXO4P98177 505 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 CACNB2Q08289 660 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 SPIRE1Q08AE8 756 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 FAM47CQ5HY64 1035 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 OTOP3Q7RTS5 596 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 FGD2Q7Z6J4 655 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 B3GNT8Q7Z7M8 397 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 ZC3H7AQ8IWR0 971 aaKnown RBP5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 FAM26EQ8N5C1 309 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 ARRDC4Q8NCT1 418 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 FBXW5Q969U6 566 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 DACT3Q96B18 629 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 SCLYQ96I15 445 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 TOX2Q96NM4 488 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 IRF2BPLQ9H1B7 796 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 CADPSQ9ULU8 1353 aa5.32□□□□□ -1.56
TRAPPC13-204ENST00000438419 KRIT1O00522 736 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 NPTXRO95502 500 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 C8BP07358 591 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 IGFALSP35858 605 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 FLT3P36888 993 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 ST5P78524 1137 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 ZNF385BQ569K4 471 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 CYP4F22Q6NT55 531 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 LCNL1Q6ZST4 164 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 RBM12BQ8IXT5 1001 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 NIM1KQ8IY84 436 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 MFSD3Q96ES6 412 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 SMOC1Q9H4F8 434 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 NUB1Q9Y5A7 615 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 TCRBV5S4A2TA0A5A2 114 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 SLC27A2O14975 620 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 NUAK1O60285 661 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 OPA1O60313 960 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 DNAJC8O75937 253 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 CR1LQ2VPA4 569 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 DALRD3Q5D0E6 543 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 EGFLAMQ63HQ2 1017 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 CNKSR3Q6P9H4 555 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 ETV3LQ6ZN32 361 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 C16orf59Q7L2K0 433 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 FAM126BQ8IXS8 530 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 SMARCC2Q8TAQ2 1214 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 PHOSPHO1Q8TCT1 267 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 CLEC4DQ8WXI8 215 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 PWWP2AQ96N64 755 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 NOX5Q96PH1 765 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 CELF4Q9BZC1 486 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 TMX1Q9H3N1 280 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 MYOTQ9UBF9 498 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 ASH2LQ9UBL3 628 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 TELO2Q9Y4R8 837 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 PCDHB4Q9Y5E5 795 aa5.31□□□□□ -1.56
TRAPPC13-204ENST00000438419 CCDC66A2RUB6 948 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 SRGAP2CP0DJJ0 459 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 KCNA6P17658 529 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 SDSP20132 328 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 CANXP27824 592 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 STAT5AP42229 794 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 GYS2P54840 703 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 HTRA3P83110 453 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 KRTAP1-1Q07627 177 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 CRY1Q16526 586 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 C21orf62-AS1Q17RA5 79 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 CIAPIN1Q6FI81 312 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 DDX53Q86TM3 631 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 UHMK1Q8TAS1 419 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 ZSCAN18Q8TBC5 510 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 SH3RF2Q8TEC5 729 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 FNIP1Q8TF40 1166 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 DDX11Q96FC9 970 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 CATSPERZQ9NTU4 200 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 CBLCQ9ULV8 474 aa5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 TNPO3Q9Y5L0 923 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-204ENST00000438419 RFXAPO00287 272 aa5.29□□□□□ -1.56
TRAPPC13-204ENST00000438419 LRG1P02750 347 aa5.29□□□□□ -1.56
TRAPPC13-204ENST00000438419 LTFP02788 710 aa5.29□□□□□ -1.56
TRAPPC13-204ENST00000438419 AMY2AP04746 511 aa5.29□□□□□ -1.56
TRAPPC13-204ENST00000438419 CKMP06732 381 aa5.29□□□□□ -1.56
TRAPPC13-204ENST00000438419 PYGMP11217 842 aa5.29□□□□□ -1.56
TRAPPC13-204ENST00000438419 AMY2BP19961 511 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms