RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 Q9Y3F1 56 aa34.67■■■■□ 3.14
CSNK1E-206ENST00000413574 MKI67P46013 3256 aaKnown RBP34.67■■■■□ 3.14
CSNK1E-206ENST00000413574 IPO5O00410 1097 aaKnown RBP34.66■■■■□ 3.14
CSNK1E-206ENST00000413574 ZSCAN22P10073 491 aaPredicted RBP34.66■■■■□ 3.14
CSNK1E-206ENST00000413574 NEDD9Q14511 834 aa34.66■■■■□ 3.14
CSNK1E-206ENST00000413574 PCDHB6Q9Y5E3 794 aa34.66■■■■□ 3.14
CSNK1E-206ENST00000413574 FARP2O94887 1054 aaPredicted RBP34.66■■■■□ 3.14
CSNK1E-206ENST00000413574 TRAPPC10P48553 1259 aa34.66■■■■□ 3.14
CSNK1E-206ENST00000413574 SP4Q02446 784 aa34.66■■■■□ 3.14
CSNK1E-206ENST00000413574 ETNPPLQ8TBG4 499 aa34.66■■■■□ 3.14
CSNK1E-206ENST00000413574 AFG1LQ8WV93 481 aa34.66■■■■□ 3.14
CSNK1E-206ENST00000413574 DDX39AO00148 427 aaKnown RBP34.65■■■■□ 3.14
CSNK1E-206ENST00000413574 EN2P19622 333 aaPredicted RBP34.65■■■■□ 3.14
CSNK1E-206ENST00000413574 LRRC41Q15345 812 aa34.65■■■■□ 3.14
CSNK1E-206ENST00000413574 HSDL1Q3SXM5 330 aa34.65■■■■□ 3.14
CSNK1E-206ENST00000413574 MYH15Q9Y2K3 1946 aa34.64■■■■□ 3.14
CSNK1E-206ENST00000413574 DHX15O43143 795 aaKnown RBP34.64■■■■□ 3.14
CSNK1E-206ENST00000413574 SOX10P56693 466 aa34.64■■■■□ 3.14
CSNK1E-206ENST00000413574 LAMC2Q13753 1193 aa34.64■■■■□ 3.14
CSNK1E-206ENST00000413574 RILPL1Q5EBL4 403 aa34.64■■■■□ 3.14
CSNK1E-206ENST00000413574 METTL7BQ6UX53 244 aa34.64■■■■□ 3.14
CSNK1E-206ENST00000413574 SPATA33Q96N06 139 aa34.64■■■■□ 3.14
CSNK1E-206ENST00000413574 SPC25Q9HBM1 224 aa34.64■■■■□ 3.14
CSNK1E-206ENST00000413574 ZDHHC9Q9Y397 364 aa34.64■■■■□ 3.14
CSNK1E-206ENST00000413574 FSCN1Q16658 493 aaKnown RBP34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 GNASQ5JWF2 1037 aa34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 KLHDC9Q8NEP7 349 aa34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 SLC5A5Q92911 643 aa34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 EMID1Q96A84 441 aaPredicted RBP34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 TMEM60Q9H2L4 133 aa34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 KCNMB3Q9NPA1 279 aa34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 NEMFO60524 1076 aa34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 PDIA4P13667 645 aaKnown RBP34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 RNF180Q86T96 592 aa34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 GIMAP8Q8ND71 665 aaPredicted RBP34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 HAS1Q92839 578 aa34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 SDF4Q9BRK5 362 aa34.63■■■■□ 3.13
CSNK1E-206ENST00000413574 DDIT3P35638 169 aa34.62■■■■□ 3.13
CSNK1E-206ENST00000413574 ARRDC4Q8NCT1 418 aa34.62■■■■□ 3.13
CSNK1E-206ENST00000413574 ZSCAN16Q9H4T2 348 aaPredicted RBP34.62■■■■□ 3.13
CSNK1E-206ENST00000413574 NFASCO94856 1347 aa34.62■■■■□ 3.13
CSNK1E-206ENST00000413574 F13A1P00488 732 aa34.61■■■■□ 3.13
CSNK1E-206ENST00000413574 NKX3-2P78367 333 aa34.61■■■■□ 3.13
CSNK1E-206ENST00000413574 JPH1Q9HDC5 661 aaPredicted RBP34.61■■■■□ 3.13
CSNK1E-206ENST00000413574 A6NJR5 290 aa34.6■■■■□ 3.13
CSNK1E-206ENST00000413574 BRD1O95696 1058 aa34.6■■■■□ 3.13
CSNK1E-206ENST00000413574 MNX1P50219 401 aaPredicted RBP34.6■■■■□ 3.13
CSNK1E-206ENST00000413574 KCNA10Q16322 511 aa34.6■■■■□ 3.13
CSNK1E-206ENST00000413574 CALCRLQ16602 461 aa34.6■■■■□ 3.13
CSNK1E-206ENST00000413574 CCSAPQ6IQ19 270 aaPredicted RBP34.6■■■■□ 3.13
CSNK1E-206ENST00000413574 SLC9A2Q9UBY0 812 aa34.6■■■■□ 3.13
CSNK1E-206ENST00000413574 MMP3P08254 477 aa34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 FOXD4L6Q3SYB3 417 aaPredicted RBP34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 LRCH2Q5VUJ6 765 aa34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 FOXD4L3Q6VB84 417 aaPredicted RBP34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 PPTC7Q8NI37 304 aa34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 EIF4ENIF1Q9NRA8 985 aaKnown RBP34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 TBC1D22BQ9NU19 505 aa34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 MARCH6O60337 910 aa34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 CCNE2O96020 404 aa34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 CPT1AP50416 773 aa34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 GPR20Q99678 358 aa34.59■■■■□ 3.13
CSNK1E-206ENST00000413574 FTOQ9C0B1 505 aaKnown RBP eCLIP34.59■■■■□ 3.134e-9■■□□□ 11.5
CSNK1E-206ENST00000413574 NOP56O00567 594 aaKnown RBP34.58■■■■□ 3.13
CSNK1E-206ENST00000413574 GAS7O60861 476 aa34.58■■■■□ 3.13
CSNK1E-206ENST00000413574 PSMD10O75832 226 aa34.58■■■■□ 3.13
CSNK1E-206ENST00000413574 CST5P28325 142 aaPredicted RBP34.58■■■■□ 3.13
CSNK1E-206ENST00000413574 C4orf32Q8N8J7 132 aa34.58■■■■□ 3.13
CSNK1E-206ENST00000413574 DIS3LQ8TF46 1054 aaKnown RBP34.58■■■■□ 3.13
CSNK1E-206ENST00000413574 MTMR9Q96QG7 549 aa34.58■■■■□ 3.13
CSNK1E-206ENST00000413574 DNM1LO00429 736 aa34.57■■■■□ 3.12
CSNK1E-206ENST00000413574 FAM20AQ96MK3 541 aa34.57■■■■□ 3.12
CSNK1E-206ENST00000413574 RIT2Q99578 217 aa34.57■■■■□ 3.12
CSNK1E-206ENST00000413574 TBX3O15119 743 aa34.56■■■■□ 3.12
CSNK1E-206ENST00000413574 ASGR1P07306 291 aa34.56■■■■□ 3.12
CSNK1E-206ENST00000413574 PTGDRQ13258 359 aa34.56■■■■□ 3.12
CSNK1E-206ENST00000413574 TEKT3Q9BXF9 490 aa34.56■■■■□ 3.12
CSNK1E-206ENST00000413574 GSTTP1A0A1W2PQM5 241 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 KBTBD13C9JR72 458 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 MYL3P08590 195 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 ORC2Q13416 577 aaPredicted RBP34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 UNC45AQ9H3U1 944 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 CHMP2AO43633 222 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 BAG4O95429 457 aaKnown RBP34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 TXKP42681 527 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 ACTR2P61160 394 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 BRDTQ58F21 947 aaPredicted RBP34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 CXCL17Q6UXB2 119 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 FERMT2Q96AC1 680 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 CLIC4Q9Y696 253 aa34.55■■■■□ 3.12
CSNK1E-206ENST00000413574 ACLYP53396 1101 aa34.54■■■■□ 3.12
CSNK1E-206ENST00000413574 SLFN12Q8IYM2 578 aa34.54■■■■□ 3.12
CSNK1E-206ENST00000413574 PCSK9Q8NBP7 692 aaKnown RBP34.54■■■■□ 3.12
CSNK1E-206ENST00000413574 IPO9Q96P70 1041 aaKnown RBP34.54■■■■□ 3.12
CSNK1E-206ENST00000413574 VAV3Q9UKW4 847 aa34.54■■■■□ 3.12
CSNK1E-206ENST00000413574 WDR81Q562E7 1941 aa34.53■■■■□ 3.12
CSNK1E-206ENST00000413574 OR52Z1P0C646 297 aa34.53■■■■□ 3.12
CSNK1E-206ENST00000413574 TCF7P36402 384 aaPredicted RBP34.53■■■■□ 3.12
CSNK1E-206ENST00000413574 CEBPZQ03701 1054 aaKnown RBP34.53■■■■□ 3.12
CSNK1E-206ENST00000413574 SF3A1Q15459 793 aaKnown RBP34.53■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms