RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 TDP2O95551 362 aa27.56■■■□□ 2
ALKAL1-201ENST00000358543 PDIA4P13667 645 aaKnown RBP27.56■■■□□ 2
ALKAL1-201ENST00000358543 SYT1P21579 422 aa27.56■■■□□ 2
ALKAL1-201ENST00000358543 SPATA33Q96N06 139 aa27.56■■■□□ 2
ALKAL1-201ENST00000358543 BCAS3Q9H6U6 928 aa27.56■■■□□ 2
ALKAL1-201ENST00000358543 DDX25Q9UHL0 483 aaKnown RBP27.56■■■□□ 2
ALKAL1-201ENST00000358543 IPO5O00410 1097 aaKnown RBP27.55■■■□□ 2
ALKAL1-201ENST00000358543 CCNT1O60563 726 aaKnown RBP27.55■■■□□ 2
ALKAL1-201ENST00000358543 ASGR1P07306 291 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 HOXD8P13378 290 aaPredicted RBP27.55■■■□□ 2
ALKAL1-201ENST00000358543 TRAPPC10P48553 1259 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 RGS19P49795 217 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 ACLYP53396 1101 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 MCTP1Q6DN14 999 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 DIS3LQ8TF46 1054 aaKnown RBP27.55■■■□□ 2
ALKAL1-201ENST00000358543 SDF4Q9BRK5 362 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 ZNF577Q9BSK1 485 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 C11orf49Q9H6J7 331 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 TBC1D22BQ9NU19 505 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 POLR3EQ9NVU0 708 aa27.55■■■□□ 2
ALKAL1-201ENST00000358543 PPFIA4O75335 1185 aa27.54■■■□□ 2
ALKAL1-201ENST00000358543 MMP3P08254 477 aa27.54■■■□□ 2
ALKAL1-201ENST00000358543 ITGB3BPQ13352 177 aaPredicted RBP27.54■■■□□ 2
ALKAL1-201ENST00000358543 HSDL1Q3SXM5 330 aa27.54■■■□□ 2
ALKAL1-201ENST00000358543 MSH4O15457 936 aa27.53■■■□□ 2
ALKAL1-201ENST00000358543 DHX15O43143 795 aaKnown RBP27.53■■■□□ 2
ALKAL1-201ENST00000358543 CABYRO75952 493 aa27.53■■■□□ 2
ALKAL1-201ENST00000358543 DGKDQ16760 1214 aa27.53■■■□□ 2
ALKAL1-201ENST00000358543 JPH1Q9HDC5 661 aaPredicted RBP27.53■■■□□ 2
ALKAL1-201ENST00000358543 PKD2L1Q9P0L9 805 aa27.53■■■□□ 2
ALKAL1-201ENST00000358543 ORC2Q13416 577 aaPredicted RBP27.52■■■□□ 2
ALKAL1-201ENST00000358543 SLC5A5Q92911 643 aa27.52■■■□□ 2
ALKAL1-201ENST00000358543 RIT2Q99578 217 aa27.52■■■□□ 2
ALKAL1-201ENST00000358543 GPR20Q99678 358 aa27.52■■■□□ 2
ALKAL1-201ENST00000358543 SENP6Q9GZR1 1112 aaPredicted RBP27.52■■■□□ 2
ALKAL1-201ENST00000358543 SLC9A2Q9UBY0 812 aa27.52■■■□□ 2
ALKAL1-201ENST00000358543 NOL7Q9UMY1 257 aaKnown RBP27.52■■■□□ 2
ALKAL1-201ENST00000358543 ELP1O95163 1332 aa27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 NOP56O00567 594 aaKnown RBP27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 TBX3O15119 743 aa27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 SLC37A4O43826 429 aa27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 SORBS3O60504 671 aa27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 CAPN15O75808 1086 aa27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 PURAQ00577 322 aaKnown RBP27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 ETNPPLQ8TBG4 499 aa27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 GLT1D1Q96MS3 346 aa27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 KCNMB3Q9NPA1 279 aa27.51■■□□□ 1.99
ALKAL1-201ENST00000358543 A0A1W2PQ45 241 aaPredicted RBP27.5■■□□□ 1.99
ALKAL1-201ENST00000358543 A0A1W2PQY0 241 aa27.5■■□□□ 1.99
ALKAL1-201ENST00000358543 VPS37CA5D8V6 355 aaPredicted RBP27.5■■□□□ 1.99
ALKAL1-201ENST00000358543 STX6O43752 255 aa27.5■■□□□ 1.99
ALKAL1-201ENST00000358543 CXCL17Q6UXB2 119 aa27.5■■□□□ 1.99
ALKAL1-201ENST00000358543 SEPT1Q8WYJ6 367 aa27.5■■□□□ 1.99
ALKAL1-201ENST00000358543 FAM20AQ96MK3 541 aa27.5■■□□□ 1.99
ALKAL1-201ENST00000358543 MTMR6Q9Y217 621 aa27.5■■□□□ 1.99
ALKAL1-201ENST00000358543 MYL3P08590 195 aa27.49■■□□□ 1.99
ALKAL1-201ENST00000358543 BRAPQ7Z569 592 aa27.49■■□□□ 1.99
ALKAL1-201ENST00000358543 SPRYD3Q8NCJ5 442 aa27.49■■□□□ 1.99
ALKAL1-201ENST00000358543 FERMT2Q96AC1 680 aa27.49■■□□□ 1.99
ALKAL1-201ENST00000358543 MTG1Q9BT17 334 aaPredicted RBP27.49■■□□□ 1.99
ALKAL1-201ENST00000358543 DOCK5Q9H7D0 1870 aa27.49■■□□□ 1.99
ALKAL1-201ENST00000358543 WNT7AO00755 349 aa27.48■■□□□ 1.99
ALKAL1-201ENST00000358543 TOB1P50616 345 aaPredicted RBP27.48■■□□□ 1.99
ALKAL1-201ENST00000358543 RILPL1Q5EBL4 403 aa27.48■■□□□ 1.99
ALKAL1-201ENST00000358543 TTC38Q5R3I4 469 aa27.48■■□□□ 1.99
ALKAL1-201ENST00000358543 C1orf53Q5VUE5 145 aa27.48■■□□□ 1.99
ALKAL1-201ENST00000358543 STARD7Q9NQZ5 370 aa27.48■■□□□ 1.99
ALKAL1-201ENST00000358543 GSTTP1A0A1W2PQM5 241 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 PSMD10O75832 226 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 ATG7O95352 703 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 KRT76Q01546 638 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 ZNF746Q6NUN9 644 aaPredicted RBP27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 SLC39A5Q6ZMH5 540 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 POTEDQ86YR6 584 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 SLFN12Q8IYM2 578 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 HAS1Q92839 578 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 SEZ6LQ9BYH1 1024 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 TELO2Q9Y4R8 837 aa27.47■■□□□ 1.99
ALKAL1-201ENST00000358543 NEMFO60524 1076 aa27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 GAS7O60861 476 aa27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 ATP2B1P20020 1258 aa27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 ACTR2P61160 394 aa27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 SP4Q02446 784 aa27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 SNX17Q15036 470 aa27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 LRCH2Q5VUJ6 765 aa27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 SMAP1Q8IYB5 467 aaPredicted RBP27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 UIMC1Q96RL1 719 aa27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 TEKT3Q9BXF9 490 aa27.46■■□□□ 1.99
ALKAL1-201ENST00000358543 BAG4O95429 457 aaKnown RBP27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 CCNE2O96020 404 aa27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 TCF7P36402 384 aaPredicted RBP27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 KAT2BQ92831 832 aa27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 VTI1AQ96AJ9 217 aa27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 MTMR9Q96QG7 549 aa27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 C16orf70Q9BSU1 422 aa27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 HTATIP2Q9BUP3 242 aa27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 ZSCAN16Q9H4T2 348 aaPredicted RBP27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 TCEAL9Q9UHQ7 104 aa27.45■■□□□ 1.98
ALKAL1-201ENST00000358543 MKI67P46013 3256 aaKnown RBP27.44■■□□□ 1.98
ALKAL1-201ENST00000358543 A0A0U1RQG5 324 aaPredicted RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms