RNA–Protein interactions for RNA: ENST00000244546.4

PEX6-201, Transcript of peroxisomal biogenesis factor 6, humanhuman

TSL 1 (best) BASIC

Gene PEX6, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX6-201ENST00000244546 PKN1Q16512 942 aa22.28■■□□□ 1.16
PEX6-201ENST00000244546 TMTC2Q8N394 836 aa22.28■■□□□ 1.16
PEX6-201ENST00000244546 GPKOWQ92917 476 aaPredicted RBP eCLIP22.28■■□□□ 1.16
PEX6-201ENST00000244546 C2CD5Q86YS7 1000 aa22.28■■□□□ 1.16
PEX6-201ENST00000244546 OR2W6PQ8NHA6 318 aa22.28■■□□□ 1.16
PEX6-201ENST00000244546 SEC16BQ96JE7 1060 aa22.28■■□□□ 1.16
PEX6-201ENST00000244546 PLAAQ9Y263 795 aa22.28■■□□□ 1.16
PEX6-201ENST00000244546 DUOX1Q9NRD9 1551 aa22.28■■□□□ 1.16
PEX6-201ENST00000244546 TNFRSF8P28908 595 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 MYO1EQ12965 1108 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 BYSLQ13895 437 aaKnown RBP22.27■■□□□ 1.16
PEX6-201ENST00000244546 KIAA0825Q8IV33 1275 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 IFT20Q8IY31 132 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 ANKRD13CQ8N6S4 541 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 NSMCE1Q8WV22 266 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 HYOU1Q9Y4L1 999 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 MGRN1O60291 552 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 FAM43BQ6ZT52 329 aaPredicted RBP22.27■■□□□ 1.16
PEX6-201ENST00000244546 SP8Q8IXZ3 490 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 ARMC2Q8NEN0 867 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 RSRC1Q96IZ7 334 aaKnown RBP22.27■■□□□ 1.16
PEX6-201ENST00000244546 NOD2Q9HC29 1040 aa22.27■■□□□ 1.16
PEX6-201ENST00000244546 FAM196BA6NMK8 535 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 HMGB1P1B2RPK0 211 aaPredicted RBP22.26■■□□□ 1.15
PEX6-201ENST00000244546 ATP6V1G2O95670 118 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 SF3A3Q12874 501 aaKnown RBP eCLIP22.26■■□□□ 1.159e-7■■■■□ 24.7
PEX6-201ENST00000244546 KCTD19Q17RG1 926 aaPredicted RBP22.26■■□□□ 1.15
PEX6-201ENST00000244546 PCMTD1Q96MG8 357 aaPredicted RBP22.26■■□□□ 1.15
PEX6-201ENST00000244546 TTYH3Q9C0H2 523 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 SH2D4AQ9H788 454 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 DAGLAQ9Y4D2 1042 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 MYH10P35580 1976 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 A0A1W2PQC6 194 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 PAFAH1B1P43034 410 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 XRCC4Q13426 336 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 PPP4R3AQ6IN85 833 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 ZNF444Q8N0Y2 327 aaPredicted RBP22.26■■□□□ 1.15
PEX6-201ENST00000244546 LMBR1Q8WVP7 490 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 IFIH1Q9BYX4 1025 aaKnown RBP22.26■■□□□ 1.15
PEX6-201ENST00000244546 GDF3Q9NR23 364 aa22.26■■□□□ 1.15
PEX6-201ENST00000244546 BUB1BO60566 1050 aaPredicted RBP22.25■■□□□ 1.15
PEX6-201ENST00000244546 ELF3P78545 371 aaPredicted RBP22.25■■□□□ 1.15
PEX6-201ENST00000244546 SPA17Q15506 151 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 GLE1Q53GS7 698 aaKnown RBP22.25■■□□□ 1.15
PEX6-201ENST00000244546 CCDC170Q8IYT3 715 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 CCDC42Q96M95 316 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 RBM28Q9NW13 759 aaKnown RBP22.25■■□□□ 1.15
PEX6-201ENST00000244546 FLT1P17948 1338 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 PDS5AQ29RF7 1337 aaKnown RBP22.25■■□□□ 1.15
PEX6-201ENST00000244546 TIAM2Q8IVF5 1701 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 RHBDL3P58872 404 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 GSTO1P78417 241 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 FUT2Q10981 343 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 TCP10Q12799 353 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 ZNF658Q5TYW1 1059 aaPredicted RBP22.25■■□□□ 1.15
PEX6-201ENST00000244546 HIBCHQ6NVY1 386 aaPredicted RBP22.25■■□□□ 1.15
PEX6-201ENST00000244546 CD302Q8IX05 232 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 RASGRP4Q8TDF6 673 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 CASKIN2Q8WXE0 1202 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 HVCN1Q96D96 273 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 DDX4Q9NQI0 724 aaKnown RBP22.25■■□□□ 1.15
PEX6-201ENST00000244546 SALL4Q9UJQ4 1053 aa22.25■■□□□ 1.15
PEX6-201ENST00000244546 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.25■■□□□ 1.15
PEX6-201ENST00000244546 TRAPPC3O43617 180 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 NPR1P16066 1061 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 TCP1P17987 556 aaKnown RBP22.24■■□□□ 1.15
PEX6-201ENST00000244546 SLC8A3P57103 927 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 PAK2Q13177 524 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 MAB21L3Q8N8X9 362 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 PNMA1Q8ND90 353 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 L3MBTL1Q9Y468 752 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 KLRG2A4D1S0 409 aaPredicted RBP22.24■■□□□ 1.15
PEX6-201ENST00000244546 KLHL33A6NCF5 533 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 ENO4A6NNW6 628 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 PTGDRQ13258 359 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 KCNB1Q14721 858 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 TYW1BQ6NUM6 668 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 PARD3BQ8TEW8 1205 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 TSGA10Q9BZW7 698 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 VAT1LQ9HCJ6 419 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 CCDC88AQ3V6T2 1871 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 H7C1D1 291 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 ORC4O43929 436 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 FGRP09769 529 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 RBM5P52756 815 aaKnown RBP eCLIP22.24■■□□□ 1.15
PEX6-201ENST00000244546 PPP1R7Q15435 360 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 SHROOM1Q2M3G4 852 aaPredicted RBP22.24■■□□□ 1.15
PEX6-201ENST00000244546 CACNA2D3Q8IZS8 1091 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 TMBIM4Q9HC24 238 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 PCDHA13Q9Y5I0 950 aa22.24■■□□□ 1.15
PEX6-201ENST00000244546 PHF20L1A8MW92 1017 aa22.23■■□□□ 1.15
PEX6-201ENST00000244546 RAD21O60216 631 aa22.23■■□□□ 1.15
PEX6-201ENST00000244546 PRLRP16471 622 aa22.23■■□□□ 1.15
PEX6-201ENST00000244546 KRT2P35908 639 aa22.23■■□□□ 1.15
PEX6-201ENST00000244546 RNASE9P60153 205 aaKnown RBP22.23■■□□□ 1.15
PEX6-201ENST00000244546 NBPF20Q3BBV1 942 aa22.23■■□□□ 1.15
PEX6-201ENST00000244546 PDXDC2PQ6P474 469 aa22.23■■□□□ 1.15
PEX6-201ENST00000244546 CALR3Q96L12 384 aaKnown RBP22.23■■□□□ 1.15
PEX6-201ENST00000244546 SPATS2LQ9NUQ6 558 aaKnown RBP22.23■■□□□ 1.15
PEX6-201ENST00000244546 SLC12A6Q9UHW9 1150 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms