RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 SLG1P54867 378 aa0.38□□□□□ -2.35
snR48snR48 YML037CQ03703 340 aa0.38□□□□□ -2.35
snR48snR48 RAD30Q04049 632 aa0.38□□□□□ -2.35
snR48snR48 HRT1Q08273 121 aa0.38□□□□□ -2.35
snR48snR48 FMP40Q08968 688 aaPredicted RBP0.38□□□□□ -2.35
snR48snR48 YDR061WQ12298 539 aa0.38□□□□□ -2.35
snR48snR48 JID1Q12350 301 aa0.38□□□□□ -2.35
snR48snR48 FOL3Q12676 427 aaPredicted RBP0.38□□□□□ -2.35
snR48snR48 RAV1P47104 1357 aa0.37□□□□□ -2.35
snR48snR48 TEF1P02994 458 aaKnown RBP0.37□□□□□ -2.35
snR48snR48 SNF1P06782 633 aaKnown RBP0.37□□□□□ -2.35
snR48snR48 PRR1P28708 518 aa0.37□□□□□ -2.35
snR48snR48 XRS2P33301 854 aa0.37□□□□□ -2.35
snR48snR48 PFF1P38244 976 aa0.37□□□□□ -2.35
snR48snR48 MSR1P38714 643 aa0.37□□□□□ -2.35
snR48snR48 MTQ1P53944 314 aa0.37□□□□□ -2.35
snR48snR48 NUP116Q02630 1113 aa0.37□□□□□ -2.35
snR48snR48 YMR102CQ03177 834 aa0.37□□□□□ -2.35
snR48snR48 HOT1Q03213 719 aa0.37□□□□□ -2.35
snR48snR48 YET2Q04210 160 aa0.37□□□□□ -2.35
snR48snR48 SNO4Q04902 237 aa0.37□□□□□ -2.35
snR48snR48 MRD1Q06106 887 aaKnown RBP0.37□□□□□ -2.35
snR48snR48 ECM7Q06200 448 aa0.37□□□□□ -2.35
snR48snR48 YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.37□□□□□ -2.35not detected
snR48snR48 HSP33Q08914 237 aaKnown RBP0.37□□□□□ -2.35
snR48snR48 HSP32Q08992 237 aa0.37□□□□□ -2.35
snR48snR48 BEM2P39960 2167 aaKnown RBP0.37□□□□□ -2.35
snR48snR48 YPR096CO13587 100 aa0.36□□□□□ -2.35
snR48snR48 HSC82P15108 705 aaKnown RBP0.36□□□□□ -2.35
snR48snR48 PRP2P20095 876 aaPredicted RBP0.36□□□□□ -2.35
snR48snR48 ELO2P25358 347 aa0.36□□□□□ -2.35
snR48snR48 CDC50P25656 391 aa0.36□□□□□ -2.35
snR48snR48 ERP2P39704 215 aa0.36□□□□□ -2.35
snR48snR48 GAT2P40209 560 aa0.36□□□□□ -2.35
snR48snR48 ALG5P40350 334 aa0.36□□□□□ -2.35
snR48snR48 CPR7P47103 393 aa0.36□□□□□ -2.35
snR48snR48 ARE2P53629 642 aaKnown RBP0.36□□□□□ -2.35
snR48snR48 SMF3Q12078 473 aaPredicted RBP0.36□□□□□ -2.35
snR48snR48 NYV1Q12255 253 aa0.36□□□□□ -2.35
snR48snR48 SSB1P11484 613 aaKnown RBP0.35□□□□□ -2.35
snR48snR48 POL4P25615 582 aa0.35□□□□□ -2.35
snR48snR48 APE2P32454 952 aaKnown RBP0.35□□□□□ -2.35
snR48snR48 OM14P38325 134 aa0.35□□□□□ -2.35
snR48snR48 KEL1P38853 1164 aaKnown RBP0.35□□□□□ -2.35
snR48snR48 FRT2P39734 528 aa0.35□□□□□ -2.35
snR48snR48 SSB2P40150 613 aaKnown RBP0.35□□□□□ -2.35
snR48snR48 STB1P42845 420 aa0.35□□□□□ -2.35
snR48snR48 OCA1P50946 238 aaPredicted RBP0.35□□□□□ -2.35
snR48snR48 FRE4P53746 719 aa0.35□□□□□ -2.35
snR48snR48 SOV1Q04748 898 aa0.35□□□□□ -2.35
snR48snR48 VID22Q05934 901 aa0.35□□□□□ -2.35
snR48snR48 PIN3Q06449 215 aa0.35□□□□□ -2.35
snR48snR48 PUT4P15380 627 aa0.34□□□□□ -2.36
snR48snR48 PEP3P27801 918 aa0.34□□□□□ -2.36
snR48snR48 MRPL27P36526 146 aaPredicted RBP0.34□□□□□ -2.36
snR48snR48 YIR035CP40579 254 aa0.34□□□□□ -2.36
snR48snR48 BNA1P47096 177 aa0.34□□□□□ -2.36
snR48snR48 MFB1Q04922 465 aa0.34□□□□□ -2.36
snR48snR48 RIF2Q06208 395 aa0.34□□□□□ -2.36
snR48snR48 YOL087CQ99247 1116 aa0.34□□□□□ -2.36
snR48snR48 SAG1P20840 650 aa0.33□□□□□ -2.36
snR48snR48 UTR5P32630 166 aa0.33□□□□□ -2.36
snR48snR48 AGA2P32781 87 aa0.33□□□□□ -2.36
snR48snR48 SKN1P33336 771 aa0.33□□□□□ -2.36
snR48snR48 YER010CP40011 234 aa0.33□□□□□ -2.36
snR48snR48 SPO73P40031 143 aa0.33□□□□□ -2.36
snR48snR48 YIL029CP40538 142 aa0.33□□□□□ -2.36
snR48snR48 IMD4P50094 524 aaKnown RBP0.33□□□□□ -2.36
snR48snR48 RHO5P53879 331 aaKnown RBP0.33□□□□□ -2.36
snR48snR48 YDR387CQ04162 555 aa0.33□□□□□ -2.36
snR48snR48 VPS38Q05919 439 aa0.33□□□□□ -2.36
snR48snR48 YPL272CQ08984 517 aa0.33□□□□□ -2.36
snR48snR48 SPE4Q12455 300 aa0.33□□□□□ -2.36
snR48snR48 ARG4P04076 463 aaPredicted RBP0.32□□□□□ -2.36
snR48snR48 RPS19AP07280 144 aaKnown RBP0.32□□□□□ -2.36
snR48snR48 RPS19BP07281 144 aaPredicted RBP0.32□□□□□ -2.36
snR48snR48 CDC24P11433 854 aaPredicted RBP0.32□□□□□ -2.36
snR48snR48 MSI1P13712 422 aa0.32□□□□□ -2.36
snR48snR48 SLC1P33333 303 aa0.32□□□□□ -2.36
snR48snR48 ALD5P40047 520 aaKnown RBP0.32□□□□□ -2.36
snR48snR48 EGT2P42835 1041 aa0.32□□□□□ -2.36
snR48snR48 YJL144WP47009 104 aa0.32□□□□□ -2.36
snR48snR48 AZR1P50080 613 aa0.32□□□□□ -2.36
snR48snR48 YNR048WP53740 393 aa0.32□□□□□ -2.36
snR48snR48 DSL1P53847 754 aa0.32□□□□□ -2.36
snR48snR48 NCS2P53923 493 aaPredicted RBP0.32□□□□□ -2.36
snR48snR48 DOS2P54858 310 aa0.32□□□□□ -2.36
snR48snR48 SSM4P40318 1319 aa0.32□□□□□ -2.36
snR48snR48 YPS1P32329 569 aa0.31□□□□□ -2.36
snR48snR48 HEL1P36113 551 aa0.31□□□□□ -2.36
snR48snR48 PFS1P38872 237 aa0.31□□□□□ -2.36
snR48snR48 JLP2P40206 208 aa0.31□□□□□ -2.36
snR48snR48 IGD1P43598 195 aa0.31□□□□□ -2.36
snR48snR48 ARC1P46672 376 aaKnown RBP0.31□□□□□ -2.36
snR48snR48 ECM27P47144 725 aa0.31□□□□□ -2.36
snR48snR48 BNS1P50084 137 aa0.31□□□□□ -2.36
snR48snR48 YIF1P53845 314 aaKnown RBP0.31□□□□□ -2.36
snR48snR48 SKM1Q12469 655 aa0.31□□□□□ -2.36
snR48snR48 ZRC1P20107 442 aa0.3□□□□□ -2.36
snR48snR48 RPB5P20434 215 aa0.3□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 1119.9 ms