RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C SMC3P47037 1230 aa3.46□□□□□ -1.86
RPA43YOR340C APT1P49435 187 aaKnown RBP3.46□□□□□ -1.86
RPA43YOR340C RSC1P53236 928 aa3.46□□□□□ -1.86
RPA43YOR340C YTP1P53584 459 aa3.46□□□□□ -1.86
RPA43YOR340C IPI3P53877 555 aa3.46□□□□□ -1.86
RPA43YOR340C YNL144CP53907 740 aa3.46□□□□□ -1.86
RPA43YOR340C YDR239CQ03780 787 aa3.46□□□□□ -1.86
RPA43YOR340C YLR297WQ05899 129 aa3.46□□□□□ -1.86
RPA43YOR340C PDR8Q06149 701 aa3.46□□□□□ -1.86
RPA43YOR340C PIG1Q06216 648 aa3.46□□□□□ -1.86
RPA43YOR340C TEN1Q07921 160 aa3.46□□□□□ -1.86
RPA43YOR340C APL4Q12028 832 aa3.46□□□□□ -1.86
RPA43YOR340C RLM1Q12224 676 aa3.46□□□□□ -1.86
RPA43YOR340C RGT2Q12300 763 aa3.46□□□□□ -1.86
RPA43YOR340C AVL9Q12500 764 aa3.46□□□□□ -1.86
RPA43YOR340C YOL159C-AQ3E769 90 aa3.46□□□□□ -1.86
RPA43YOR340C ATP1P07251 545 aaKnown RBP3.45□□□□□ -1.86
RPA43YOR340C NAT1P12945 854 aaKnown RBP3.45□□□□□ -1.86
RPA43YOR340C APE1P14904 514 aa3.45□□□□□ -1.86
RPA43YOR340C PDX1P16451 410 aa3.45□□□□□ -1.86
RPA43YOR340C DAL2P25335 343 aa3.45□□□□□ -1.86
RPA43YOR340C STE50P25344 346 aa3.45□□□□□ -1.86
RPA43YOR340C PPZ1P26570 692 aa3.45□□□□□ -1.86
RPA43YOR340C SAC1P32368 623 aaKnown RBP3.45□□□□□ -1.86
RPA43YOR340C FRE1P32791 686 aa3.45□□□□□ -1.86
RPA43YOR340C WBP1P33767 430 aaKnown RBP3.45□□□□□ -1.86
RPA43YOR340C YBL055CP34220 418 aaPredicted RBP3.45□□□□□ -1.86
RPA43YOR340C YKL097CP34245 136 aa3.45□□□□□ -1.86
RPA43YOR340C CTM1P38818 585 aa3.45□□□□□ -1.86
RPA43YOR340C SMF1P38925 575 aa3.45□□□□□ -1.86
RPA43YOR340C YMR124WP39523 943 aaKnown RBP3.45□□□□□ -1.86
RPA43YOR340C HOS2P53096 452 aaPredicted RBP3.45□□□□□ -1.86
RPA43YOR340C YGR127WP53275 312 aa3.45□□□□□ -1.86
RPA43YOR340C BOP3P53958 396 aa3.45□□□□□ -1.86
RPA43YOR340C RPA49Q01080 415 aaPredicted RBP3.45□□□□□ -1.86
RPA43YOR340C ADA2Q02336 434 aa3.45□□□□□ -1.86
RPA43YOR340C YMR178WQ03219 274 aaKnown RBP3.45□□□□□ -1.86
RPA43YOR340C GRC3Q07845 632 aa3.45□□□□□ -1.86
RPA43YOR340C ATG29Q12092 213 aa3.45□□□□□ -1.86
RPA43YOR340C HRT3Q12347 344 aa3.45□□□□□ -1.86
RPA43YOR340C RRI1Q12468 440 aa3.45□□□□□ -1.86
RPA43YOR340C AI5_BETAQ9ZZX0 354 aa3.45□□□□□ -1.86
RPA43YOR340C GAL4P04386 881 aa3.44□□□□□ -1.86
RPA43YOR340C MAS1P10507 462 aa3.44□□□□□ -1.86
RPA43YOR340C HOM3P10869 527 aa3.44□□□□□ -1.86
RPA43YOR340C PDA1P16387 420 aaKnown RBP3.44□□□□□ -1.86
RPA43YOR340C CLB2P24869 491 aa3.44□□□□□ -1.86
RPA43YOR340C YBR144CP34215 104 aa3.44□□□□□ -1.86
RPA43YOR340C CSG2P35206 410 aa3.44□□□□□ -1.86
RPA43YOR340C TSC10P38342 320 aa3.44□□□□□ -1.86
RPA43YOR340C EFM2P38347 419 aa3.44□□□□□ -1.86
RPA43YOR340C DBP8P38719 431 aa3.44□□□□□ -1.86
RPA43YOR340C ANS1P38832 159 aa3.44□□□□□ -1.86
RPA43YOR340C RTT107P38850 1070 aa3.44□□□□□ -1.86
RPA43YOR340C SPC97P38863 823 aa3.44□□□□□ -1.86
RPA43YOR340C DSE1P40077 573 aa3.44□□□□□ -1.86
RPA43YOR340C YTA12P40341 825 aa3.44□□□□□ -1.86
RPA43YOR340C PTR3P43606 678 aa3.44□□□□□ -1.86
RPA43YOR340C FYV8P46949 817 aaKnown RBP3.44□□□□□ -1.86
RPA43YOR340C HER2Q03557 464 aa3.44□□□□□ -1.86
RPA43YOR340C ECM22Q05958 814 aaPredicted RBP3.44□□□□□ -1.86
RPA43YOR340C ETT1Q08421 412 aaKnown RBP3.44□□□□□ -1.86
RPA43YOR340C RRD2Q12461 358 aa3.44□□□□□ -1.86
RPA43YOR340C YPR089WO13585 888 aa3.43□□□□□ -1.86
RPA43YOR340C ART10P18634 518 aaKnown RBP3.43□□□□□ -1.86
RPA43YOR340C CNA1P23287 553 aa3.43□□□□□ -1.86
RPA43YOR340C VPS3P23643 1011 aa3.43□□□□□ -1.86
RPA43YOR340C CLB3P24870 427 aa3.43□□□□□ -1.86
RPA43YOR340C BOS1P25385 244 aa3.43□□□□□ -1.86
RPA43YOR340C DBF4P32325 704 aa3.43□□□□□ -1.86
RPA43YOR340C EFB1P32471 206 aaKnown RBP3.43□□□□□ -1.86
RPA43YOR340C VPH1P32563 840 aaKnown RBP3.43□□□□□ -1.86
RPA43YOR340C MRE11P32829 692 aa3.43□□□□□ -1.86
RPA43YOR340C TKL2P33315 681 aa3.43□□□□□ -1.86
RPA43YOR340C PXA2P34230 853 aa3.43□□□□□ -1.86
RPA43YOR340C ICS2P38284 255 aa3.43□□□□□ -1.86
RPA43YOR340C SRP72P38688 640 aaKnown RBP3.43□□□□□ -1.86
RPA43YOR340C SPT8P38915 602 aa3.43□□□□□ -1.86
RPA43YOR340C FHL1P39521 936 aa3.43□□□□□ -1.86
RPA43YOR340C YEL075CP39972 122 aa3.43□□□□□ -1.86
RPA43YOR340C MMF1P40185 145 aaKnown RBP3.43□□□□□ -1.86
RPA43YOR340C MOB1P40484 314 aa3.43□□□□□ -1.86
RPA43YOR340C NOP13P53883 403 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
RPA43YOR340C ASI1P54074 624 aa3.43□□□□□ -1.86
RPA43YOR340C MZM1Q03429 123 aaPredicted RBP3.43□□□□□ -1.86
RPA43YOR340C FIN1Q03898 291 aa3.43□□□□□ -1.86
RPA43YOR340C YDR131CQ03899 556 aa3.43□□□□□ -1.86
RPA43YOR340C MRPL1Q04599 285 aa3.43□□□□□ -1.86
RPA43YOR340C PRM6Q04705 352 aa3.43□□□□□ -1.86
RPA43YOR340C HCR1Q05775 265 aaKnown RBP3.43□□□□□ -1.86
RPA43YOR340C TSR1Q07381 788 aaKnown RBP3.43□□□□□ -1.86
RPA43YOR340C RPS10AQ08745 105 aaPredicted RBP3.43□□□□□ -1.86
RPA43YOR340C GPM2Q12008 311 aa3.43□□□□□ -1.86
RPA43YOR340C YPQ1Q12010 308 aa3.43□□□□□ -1.86
RPA43YOR340C VPS54Q12071 889 aa3.43□□□□□ -1.86
RPA43YOR340C HER1Q12276 1246 aa3.43□□□□□ -1.86
RPA43YOR340C GAC1P28006 793 aa3.42□□□□□ -1.86
RPA43YOR340C PMT1P33775 817 aa3.42□□□□□ -1.86
RPA43YOR340C PHO86P46956 311 aa3.42□□□□□ -1.86
RPA43YOR340C LYS20P48570 428 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms