RNA–Protein interactions for RNA: YOR278W

HEM4, Transcript of Uroporphyrinogen III synthase, yeast

Gene HEM4, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HEM4	YOR278W	VPS54	Q12071	889 aa		2.68	□□□□□ -1.98
HEM4	YOR278W	UBX3	Q12229	455 aa		2.68	□□□□□ -1.98
HEM4	YOR278W	TY1B-A	O13527	1196 aa	Known RBP	2.67	□□□□□ -1.98
HEM4	YOR278W	CAR1	P00812	333 aa	Known RBP	2.67	□□□□□ -1.98
HEM4	YOR278W	LEU4	P06208	619 aa	Known RBP	2.67	□□□□□ -1.98
HEM4	YOR278W	ARO3	P14843	370 aa	Known RBP	2.67	□□□□□ -1.98
HEM4	YOR278W	RHB1	P25378	209 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	BUB3	P26449	341 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
HEM4	YOR278W	SPC110	P32380	944 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	ECM25	P32525	599 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	UIP5	P36137	443 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	ASC1	P38011	319 aa	Known RBP	2.67	□□□□□ -1.98
HEM4	YOR278W	PCA1	P38360	1216 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	YIR014W	P40570	242 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	EOS1	P53938	366 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	TAF12	Q03761	539 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	RPN9	Q04062	393 aa	Known RBP	2.67	□□□□□ -1.98
HEM4	YOR278W	RBA50	Q04418	439 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	HSP31	Q04432	237 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	YDR286C	Q05530	114 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	YLR281C	Q05863	155 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	SYO1	Q07395	620 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	SMF3	Q12078	473 aa	Predicted RBP	2.67	□□□□□ -1.98
HEM4	YOR278W	AEP3	Q12089	606 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	YDL009C	Q12210	107 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	ESP1	Q03018	1630 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	MET5	P47169	1442 aa		2.67	□□□□□ -1.98
HEM4	YOR278W	DNF1	P32660	1571 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	IRC20	Q06554	1556 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	YUR1	P26725	428 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	ATO2	P32907	282 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	SOR1	P35497	357 aa	Known RBP	2.66	□□□□□ -1.98
HEM4	YOR278W	CBP4	P37267	147 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	ADH5	P38113	351 aa	Known RBP	2.66	□□□□□ -1.98
HEM4	YOR278W	FAD1	P38913	306 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	VPS52	P39904	641 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	YIR016W	P40572	265 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	YPS6	P40583	537 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	TRS85	P46944	698 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	PHO86	P46956	311 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	MLC1	P53141	149 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	TDA7	P53882	636 aa	Predicted RBP	2.66	□□□□□ -1.98
HEM4	YOR278W	SEC5	P89102	971 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	RPM2	Q02773	1202 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	YDR341C	Q05506	607 aa	Known RBP	2.66	□□□□□ -1.98
HEM4	YOR278W	HCR1	Q05775	265 aa	Known RBP	2.66	□□□□□ -1.98
HEM4	YOR278W	SOR2	Q07786	357 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	CUE5	Q08412	411 aa	Known RBP	2.66	□□□□□ -1.98
HEM4	YOR278W	NFI1	Q12216	726 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	RUP1	Q12242	671 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	FRE6	Q12473	712 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	TY1B-BR	Q12193	1756 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	TY1B-GR3	Q12316	1755 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	TY1B-OR	Q92393	1755 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	RKR1	Q04781	1562 aa		2.66	□□□□□ -1.98
HEM4	YOR278W	GEA2	P39993	1459 aa	Known RBP	2.65	□□□□□ -1.98
HEM4	YOR278W	TY2B-LR1	P0C2J3	1770 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	TY2B-F	P0CX63	1770 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	TY2B-GR2	P0CX64	1770 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	TY2B-C	P25384	1770 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	TY2B-DR2	Q03494	1770 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	TY1B-DR1	Q03855	1755 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	TY2B-DR3	Q07791	1770 aa	Known RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	TY2B-OR1	Q12113	1770 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	TY2B-DR1	Q12472	1770 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	TY2B-OR2	Q12501	1770 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	HIS4	P00815	799 aa	Known RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	YML002W	P0CF17	737 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	SRV2	P17555	526 aa	Known RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	GLN3	P18494	730 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	EXO70	P19658	623 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	HNM1	P19807	563 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	SEC62	P21825	274 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	RRN10	P38204	145 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	OLA1	P38219	394 aa	Known RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	YSW1	P38280	609 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	GDT1	P38301	280 aa	Predicted RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	ARC40	P38328	384 aa	Known RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	STN1	P38960	494 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	YAL037W	P39728	267 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	GAT2	P40209	560 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	AZF1	P41696	914 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	BTN2	P53286	410 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	TOF1	P53840	1238 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	RHO5	P53879	331 aa	Known RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	ARK1	P53974	638 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	PRP42	Q03776	544 aa	Known RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	URH1	Q04179	340 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	YMR034C	Q05131	434 aa	Predicted RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	MRPL51	Q06090	140 aa	Predicted RBP	2.65	□□□□□ -1.99
HEM4	YOR278W	YEH2	Q07950	538 aa		2.65	□□□□□ -1.99
HEM4	YOR278W	SIN3	P22579	1536 aa		2.64	□□□□□ -1.99
HEM4	YOR278W	PMR1	P13586	950 aa		2.64	□□□□□ -1.99
HEM4	YOR278W	VMA2	P16140	517 aa	Known RBP	2.64	□□□□□ -1.99
HEM4	YOR278W	DAP2	P18962	818 aa		2.64	□□□□□ -1.99
HEM4	YOR278W	PTP1	P25044	335 aa		2.64	□□□□□ -1.99
HEM4	YOR278W	CTR86	P25355	563 aa		2.64	□□□□□ -1.99
HEM4	YOR278W	SMY1	P32364	656 aa	Known RBP	2.64	□□□□□ -1.99
HEM4	YOR278W	APE2	P32454	952 aa	Known RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms