RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W TY2B-DR3Q07791 1770 aaKnown RBP4.09□□□□□ -1.76
SEN1YLR430W TY2B-OR1Q12113 1770 aa4.09□□□□□ -1.76
SEN1YLR430W TY2B-DR1Q12472 1770 aa4.09□□□□□ -1.76
SEN1YLR430W TY2B-OR2Q12501 1770 aa4.09□□□□□ -1.76
SEN1YLR430W SPS4P09937 338 aa4.09□□□□□ -1.76
SEN1YLR430W IFM1P25038 676 aa4.09□□□□□ -1.76
SEN1YLR430W CHK1P38147 527 aa4.09□□□□□ -1.76
SEN1YLR430W YER010CP40011 234 aa4.09□□□□□ -1.76
SEN1YLR430W RPN3P40016 523 aaKnown RBP4.09□□□□□ -1.76
SEN1YLR430W YIL054WP40524 105 aa4.09□□□□□ -1.76
SEN1YLR430W YPL108WQ02872 168 aaPredicted RBP4.09□□□□□ -1.76
SEN1YLR430W MAK3Q03503 176 aa4.09□□□□□ -1.76
SEN1YLR430W HOF1Q05080 669 aa4.09□□□□□ -1.76
SEN1YLR430W YFR010W-AP0C5N0 62 aa4.08□□□□□ -1.76
SEN1YLR430W MDL2P33311 773 aa4.08□□□□□ -1.76
SEN1YLR430W PAN5P38787 379 aa4.08□□□□□ -1.76
SEN1YLR430W SCC4P40090 624 aa4.08□□□□□ -1.76
SEN1YLR430W ALG8P40351 577 aa4.08□□□□□ -1.76
SEN1YLR430W CFD1P40558 293 aa4.08□□□□□ -1.76
SEN1YLR430W MRPL22P53881 309 aa4.08□□□□□ -1.76
SEN1YLR430W SLM2P53955 656 aa4.08□□□□□ -1.76
SEN1YLR430W LRS4Q04087 347 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W SUS1Q6WNK7 96 aa4.08□□□□□ -1.76
SEN1YLR430W YBL086CP38177 466 aa4.08□□□□□ -1.76
SEN1YLR430W VPS45P38932 577 aa4.08□□□□□ -1.76
SEN1YLR430W MND2P40577 368 aa4.08□□□□□ -1.76
SEN1YLR430W IMA5P40884 581 aa4.08□□□□□ -1.76
SEN1YLR430W MAD2P40958 196 aa4.08□□□□□ -1.76
SEN1YLR430W ASG7P46993 209 aa4.08□□□□□ -1.76
SEN1YLR430W CTR1P49573 406 aa4.08□□□□□ -1.76
SEN1YLR430W YPL113CQ02961 396 aa4.08□□□□□ -1.76
SEN1YLR430W MRPS17Q03246 237 aaPredicted RBP4.08□□□□□ -1.76
SEN1YLR430W RMT2Q03305 412 aa4.08□□□□□ -1.76
SEN1YLR430W UGO1Q03327 502 aa4.08□□□□□ -1.76
SEN1YLR430W YOR238WQ08634 303 aa4.08□□□□□ -1.76
SEN1YLR430W ATX2Q12067 313 aa4.08□□□□□ -1.76
SEN1YLR430W MTR10Q99189 972 aa4.08□□□□□ -1.76
SEN1YLR430W ECM3Q99252 613 aa4.08□□□□□ -1.76
SEN1YLR430W RIB3Q99258 208 aa4.08□□□□□ -1.76
SEN1YLR430W FUM1P08417 488 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W FUS3P16892 353 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W DAL81P21657 970 aa4.08□□□□□ -1.76
SEN1YLR430W SHP1P34223 423 aa4.08□□□□□ -1.76
SEN1YLR430W ZRT3P34240 503 aa4.08□□□□□ -1.76
SEN1YLR430W TCM62P38228 572 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W ARN1P38731 627 aa4.08□□□□□ -1.76
SEN1YLR430W MRH4P53166 561 aa4.08□□□□□ -1.76
SEN1YLR430W ARE2P53629 642 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W PPM2Q08282 695 aa4.08□□□□□ -1.76
SEN1YLR430W CHS1P08004 1131 aa4.08□□□□□ -1.76
SEN1YLR430W PUT4P15380 627 aa4.08□□□□□ -1.76
SEN1YLR430W LDS1P31379 325 aa4.08□□□□□ -1.76
SEN1YLR430W LHP1P33399 275 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W RMA1P36001 430 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W RGI1P40043 161 aaPredicted RBP4.08□□□□□ -1.76
SEN1YLR430W ARF3P40994 183 aaRIP-Chip data4.08□□□□□ -1.76not detected
SEN1YLR430W MRX5P47007 382 aa4.08□□□□□ -1.76
SEN1YLR430W YJL045WP47052 634 aa4.08□□□□□ -1.76
SEN1YLR430W EAR1Q03212 550 aa4.08□□□□□ -1.76
SEN1YLR430W YGK3Q12222 375 aaPredicted RBP4.08□□□□□ -1.76
SEN1YLR430W SFM1Q12314 213 aa4.08□□□□□ -1.76
SEN1YLR430W THP2O13539 261 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W RPL4AP10664 362 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W AFG3P39925 761 aa4.08□□□□□ -1.76
SEN1YLR430W YIR035CP40579 254 aa4.08□□□□□ -1.76
SEN1YLR430W SPO74P45819 413 aa4.08□□□□□ -1.76
SEN1YLR430W RPL4BP49626 362 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W RCO1Q04779 684 aa4.08□□□□□ -1.76
SEN1YLR430W YDR278CQ05612 105 aa4.08□□□□□ -1.76
SEN1YLR430W WHI4Q07655 649 aaKnown RBP4.08□□□□□ -1.76
SEN1YLR430W TY2B-BQ12491 1770 aa4.08□□□□□ -1.76
SEN1YLR430W SCEIP03882 235 aa4.07□□□□□ -1.76
SEN1YLR430W PUP3P25451 205 aaKnown RBP4.07□□□□□ -1.76
SEN1YLR430W RBG1P39729 369 aa4.07□□□□□ -1.76
SEN1YLR430W PEP8P40335 379 aa4.07□□□□□ -1.76
SEN1YLR430W AAD14P42884 376 aa4.07□□□□□ -1.76
SEN1YLR430W GYP8P43570 497 aa4.07□□□□□ -1.76
SEN1YLR430W YDL183CP48569 320 aa4.07□□□□□ -1.76
SEN1YLR430W SSU72P53538 206 aaPredicted RBP4.07□□□□□ -1.76
SEN1YLR430W YMR130WQ04223 302 aa4.07□□□□□ -1.76
SEN1YLR430W CSM3Q04659 317 aa4.07□□□□□ -1.76
SEN1YLR430W YOR114WQ12219 294 aa4.07□□□□□ -1.76
SEN1YLR430W RHO2P06781 192 aa4.07□□□□□ -1.76
SEN1YLR430W MET3P08536 511 aa4.07□□□□□ -1.76
SEN1YLR430W TRX1P22217 103 aaKnown RBP4.07□□□□□ -1.76
SEN1YLR430W PHA2P32452 334 aa4.07□□□□□ -1.76
SEN1YLR430W YAP1801P38856 637 aa4.07□□□□□ -1.76
SEN1YLR430W PKP1P40530 394 aa4.07□□□□□ -1.76
SEN1YLR430W SLS1P42900 643 aa4.07□□□□□ -1.76
SEN1YLR430W GSM1P42950 618 aa4.07□□□□□ -1.76
SEN1YLR430W VOA1P53262 265 aa4.07□□□□□ -1.76
SEN1YLR430W TRM12Q04235 462 aa4.07□□□□□ -1.76
SEN1YLR430W RGS2Q99188 309 aa4.07□□□□□ -1.76
SEN1YLR430W MAS2P11914 482 aa4.07□□□□□ -1.76
SEN1YLR430W RAD54P32863 898 aa4.07□□□□□ -1.76
SEN1YLR430W UBX7P38349 436 aa4.07□□□□□ -1.76
SEN1YLR430W ERO1Q03103 563 aa4.07□□□□□ -1.76
SEN1YLR430W GLO4Q12320 285 aa4.07□□□□□ -1.76
SEN1YLR430W RPS18AP0CX55 146 aaKnown RBP4.07□□□□□ -1.76
SEN1YLR430W RPS18BP0CX56 146 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms