RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	CFD1	P40558	293 aa		14.8	□□□□□ -0.04
CCC1	YLR220W	PDR8	Q06149	701 aa		14.8	□□□□□ -0.04
CCC1	YLR220W	YDR061W	Q12298	539 aa		14.8	□□□□□ -0.04
CCC1	YLR220W	GAL4	P04386	881 aa		14.79	□□□□□ -0.04
CCC1	YLR220W	ARG81	P05085	880 aa		14.79	□□□□□ -0.04
CCC1	YLR220W	RPL40A	P0CH08	128 aa	Known RBP	14.79	□□□□□ -0.04
CCC1	YLR220W	RPL40B	P0CH09	128 aa	Known RBP	14.79	□□□□□ -0.04
CCC1	YLR220W	ATP7	P30902	174 aa		14.79	□□□□□ -0.04
CCC1	YLR220W	SSH4	P32343	579 aa		14.79	□□□□□ -0.04
CCC1	YLR220W	SRB5	P32585	307 aa		14.79	□□□□□ -0.04
CCC1	YLR220W	EHT1	P38295	451 aa		14.79	□□□□□ -0.04
CCC1	YLR220W	YPL071C	Q02864	156 aa		14.79	□□□□□ -0.04
CCC1	YLR220W	ACL4	Q03771	387 aa		14.79	□□□□□ -0.04
CCC1	YLR220W	MUM3	Q08750	479 aa		14.79	□□□□□ -0.04
CCC1	YLR220W	HOP1	P20050	605 aa		14.78	□□□□□ -0.04
CCC1	YLR220W	CAT2	P32796	670 aa	Known RBP	14.78	□□□□□ -0.04
CCC1	YLR220W	NAM8	Q00539	523 aa	Known RBP	14.78	□□□□□ -0.04
CCC1	YLR220W	SSQ1	Q05931	657 aa	Predicted RBP	14.78	□□□□□ -0.04
CCC1	YLR220W	BSC6	Q08280	497 aa		14.78	□□□□□ -0.04
CCC1	YLR220W	YPR064W	Q12492	139 aa		14.78	□□□□□ -0.04
CCC1	YLR220W	PNO1	Q99216	274 aa	Known RBP	14.78	□□□□□ -0.04
CCC1	YLR220W	STE7	P06784	515 aa		14.77	□□□□□ -0.05
CCC1	YLR220W	IDH2	P28241	369 aa	Known RBP	14.77	□□□□□ -0.05
CCC1	YLR220W	RPT5	P33297	434 aa	Known RBP	14.77	□□□□□ -0.05
CCC1	YLR220W	GLG1	P36143	616 aa		14.77	□□□□□ -0.05
CCC1	YLR220W	MNL1	P38888	796 aa		14.77	□□□□□ -0.05
CCC1	YLR220W	RGI1	P40043	161 aa	Predicted RBP	14.77	□□□□□ -0.05
CCC1	YLR220W	MAM33	P40513	266 aa		14.77	□□□□□ -0.05
CCC1	YLR220W	UPF3	P48412	387 aa	Known RBP	14.77	□□□□□ -0.05
CCC1	YLR220W	RAD17	P48581	401 aa		14.77	□□□□□ -0.05
CCC1	YLR220W	ROG1	P53118	685 aa		14.77	□□□□□ -0.05
CCC1	YLR220W	ATG26	Q06321	1198 aa		14.77	□□□□□ -0.05
CCC1	YLR220W	GPN2	Q08726	347 aa	Predicted RBP	14.77	□□□□□ -0.05
CCC1	YLR220W	MLH3	Q12083	715 aa		14.77	□□□□□ -0.05
CCC1	YLR220W	RPN6	Q12377	434 aa		14.77	□□□□□ -0.05
CCC1	YLR220W	ARG3	P05150	338 aa		14.76	□□□□□ -0.05
CCC1	YLR220W	ATP4	P05626	244 aa		14.76	□□□□□ -0.05
CCC1	YLR220W	CTS1	P29029	562 aa		14.76	□□□□□ -0.05
CCC1	YLR220W	SEC17	P32602	292 aa		14.76	□□□□□ -0.05
CCC1	YLR220W	SNF8	Q12483	233 aa		14.76	□□□□□ -0.05
CCC1	YLR220W	HFA1	P32874	2273 aa		14.76	□□□□□ -0.05
CCC1	YLR220W	ALG7	P07286	448 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	UGA1	P17649	471 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	RVS161	P25343	265 aa	Known RBP	14.75	□□□□□ -0.05
CCC1	YLR220W	PET112	P33893	541 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	OAR1	P35731	278 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	MNN2	P38069	597 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	YRO2	P38079	344 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	JEM1	P40358	645 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	YIL001W	P40560	513 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	PAC11	P40960	533 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	DUG1	P43616	481 aa	Known RBP	14.75	□□□□□ -0.05
CCC1	YLR220W	SED5	Q01590	340 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	RAD33	Q04231	177 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	GLO4	Q12320	285 aa		14.75	□□□□□ -0.05
CCC1	YLR220W	MGR1	P25573	417 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	IMG1	P25626	169 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	SUI1	P32911	108 aa	Known RBP	14.74	□□□□□ -0.05
CCC1	YLR220W	BNA4	P38169	460 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	OCA5	P38738	679 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	UME6	P39001	836 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	NEO1	P40527	1151 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	YMR010W	Q03687	405 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	BOP2	Q06150	570 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	YLL007C	Q07799	665 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	MMT2	Q08970	484 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	NSI1	Q12457	570 aa		14.74	□□□□□ -0.05
CCC1	YLR220W	TY4B-P	A0A0B7P3V8	1104 aa		14.73	□□□□□ -0.05
CCC1	YLR220W	UNG1	P12887	359 aa		14.73	□□□□□ -0.05
CCC1	YLR220W	TFC1	P32367	649 aa		14.73	□□□□□ -0.05
CCC1	YLR220W	FAD1	P38913	306 aa		14.73	□□□□□ -0.05
CCC1	YLR220W	YAT1	P80235	687 aa		14.73	□□□□□ -0.05
CCC1	YLR220W	ASA1	Q06822	443 aa		14.73	□□□□□ -0.05
CCC1	YLR220W	PUN1	Q06991	263 aa		14.73	□□□□□ -0.05
CCC1	YLR220W	YOL036W	Q08206	761 aa		14.73	□□□□□ -0.05
CCC1	YLR220W	YOL159C	Q08300	171 aa		14.73	□□□□□ -0.05
CCC1	YLR220W	SPB1	P25582	841 aa	Predicted RBP	14.72	□□□□□ -0.05
CCC1	YLR220W	DOA1	P36037	715 aa		14.72	□□□□□ -0.05
CCC1	YLR220W	YBR238C	P38330	731 aa	Known RBP	14.72	□□□□□ -0.05
CCC1	YLR220W	YNL033W	P53964	284 aa		14.72	□□□□□ -0.05
CCC1	YLR220W	YNL019C	P53975	284 aa		14.72	□□□□□ -0.05
CCC1	YLR220W	THP2	O13539	261 aa	Known RBP	14.71	□□□□□ -0.05
CCC1	YLR220W	DAP2	P18962	818 aa		14.71	□□□□□ -0.05
CCC1	YLR220W	YCR006C	P25350	157 aa		14.71	□□□□□ -0.05
CCC1	YLR220W	OMA1	P36163	345 aa		14.71	□□□□□ -0.05
CCC1	YLR220W	YJL043W	P47053	257 aa		14.71	□□□□□ -0.05
CCC1	YLR220W	HOC1	P47124	396 aa		14.71	□□□□□ -0.05
CCC1	YLR220W	IBA57	P47158	497 aa		14.71	□□□□□ -0.05
CCC1	YLR220W	SVL3	Q03088	825 aa	Known RBP	14.71	□□□□□ -0.05
CCC1	YLR220W	CBS2	P14905	389 aa		14.7	□□□□□ -0.06
CCC1	YLR220W	MSB1	P21339	1137 aa	Known RBP	14.7	□□□□□ -0.06
CCC1	YLR220W	YMC1	P32331	307 aa		14.7	□□□□□ -0.06
CCC1	YLR220W	TAF14	P35189	244 aa		14.7	□□□□□ -0.06
CCC1	YLR220W	STP2	P38704	541 aa		14.7	□□□□□ -0.06
CCC1	YLR220W	DSS1	P39112	969 aa		14.7	□□□□□ -0.06
CCC1	YLR220W	PTC2	P39966	464 aa	Known RBP	14.7	□□□□□ -0.06
CCC1	YLR220W	ALK1	P43633	760 aa	Known RBP	14.7	□□□□□ -0.06
CCC1	YLR220W	PMT4	P46971	762 aa		14.7	□□□□□ -0.06
CCC1	YLR220W	KEL2	P50090	882 aa		14.7	□□□□□ -0.06
CCC1	YLR220W	GET1	P53192	235 aa		14.7	□□□□□ -0.06

Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms