RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W AIM33Q04516 312 aa2.39□□□□□ -2.03
HRD3YLR207W DCS1Q06151 350 aa2.39□□□□□ -2.03
HRD3YLR207W ARO10Q06408 635 aa2.39□□□□□ -2.03
HRD3YLR207W PCL8Q08966 492 aa2.39□□□□□ -2.03
HRD3YLR207W RUD3Q12234 484 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W SPS4P09937 338 aa2.39□□□□□ -2.03
HRD3YLR207W RPL31BP0C2H9 113 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W YMR085WP0CF18 432 aa2.39□□□□□ -2.03
HRD3YLR207W GCD2P12754 651 aaPredicted RBP2.39□□□□□ -2.03
HRD3YLR207W UBA1P22515 1024 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W RAD14P28519 371 aa2.39□□□□□ -2.03
HRD3YLR207W MCM4P30665 933 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W NTG1P31378 399 aa2.39□□□□□ -2.03
HRD3YLR207W NDI1P32340 513 aa2.39□□□□□ -2.03
HRD3YLR207W ADE17P38009 592 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W YMC2P38087 329 aa2.39□□□□□ -2.03
HRD3YLR207W HSM3P38348 480 aa2.39□□□□□ -2.03
HRD3YLR207W PCI8P40512 444 aa2.39□□□□□ -2.03
HRD3YLR207W YJL043WP47053 257 aa2.39□□□□□ -2.03
HRD3YLR207W ASN1P49089 572 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W ARV1Q06541 321 aa2.39□□□□□ -2.03
HRD3YLR207W SLK19Q08581 821 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W LEA1Q08963 238 aaPredicted RBP2.39□□□□□ -2.03
HRD3YLR207W MRH1Q12117 320 aaPredicted RBP2.39□□□□□ -2.03
HRD3YLR207W MRPL23Q12487 163 aaPredicted RBP2.39□□□□□ -2.03
HRD3YLR207W FLO1P32768 1537 aa2.39□□□□□ -2.03
HRD3YLR207W RPL7AP05737 244 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W HNM1P19807 563 aa2.38□□□□□ -2.03
HRD3YLR207W SRP54P20424 541 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W MBR1P23493 339 aa2.38□□□□□ -2.03
HRD3YLR207W YSP3P25036 478 aa2.38□□□□□ -2.03
HRD3YLR207W PUP3P25451 205 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W RDS1P25611 832 aa2.38□□□□□ -2.03
HRD3YLR207W GAC1P28006 793 aa2.38□□□□□ -2.03
HRD3YLR207W YIM1P28625 365 aa2.38□□□□□ -2.03
HRD3YLR207W FAA1P30624 700 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W RIM1P32445 135 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W MRP4P32902 394 aa2.38□□□□□ -2.03
HRD3YLR207W MIC60P36112 540 aa2.38□□□□□ -2.03
HRD3YLR207W ZTA1P38230 334 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W PHO88P38264 188 aaPredicted RBP2.38□□□□□ -2.03
HRD3YLR207W ELO1P39540 310 aa2.38□□□□□ -2.03
HRD3YLR207W PHM8P40025 321 aa2.38□□□□□ -2.03
HRD3YLR207W ULP2P40537 1034 aaPredicted RBP2.38□□□□□ -2.03
HRD3YLR207W YFL015CP43578 164 aa2.38□□□□□ -2.03
HRD3YLR207W YHC3P47040 408 aa2.38□□□□□ -2.03
HRD3YLR207W LIA1P47120 325 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W KEL2P50090 882 aa2.38□□□□□ -2.03
HRD3YLR207W STB4P50104 949 aa2.38□□□□□ -2.03
HRD3YLR207W YIP5P53108 310 aa2.38□□□□□ -2.03
HRD3YLR207W VPS73P53142 486 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W LSC1P53598 329 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W RRB1Q04225 511 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W DIS3Q08162 1001 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W RPL7BQ12213 244 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W CBP2P03874 630 aaPredicted RBP2.38□□□□□ -2.03
HRD3YLR207W ILV5P06168 395 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W MATALPHA2P0CY08 210 aa2.38□□□□□ -2.03
HRD3YLR207W HMLALPHA2P0CY09 210 aa2.38□□□□□ -2.03
HRD3YLR207W RPC34P32910 317 aa2.38□□□□□ -2.03
HRD3YLR207W OCT1P35999 772 aa2.38□□□□□ -2.03
HRD3YLR207W IMD2P38697 523 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W GCD10P41814 478 aa2.38□□□□□ -2.03
HRD3YLR207W LAM5P43560 674 aa2.38□□□□□ -2.03
HRD3YLR207W YFR020WP43600 232 aa2.38□□□□□ -2.03
HRD3YLR207W YGL117WP53133 265 aa2.38□□□□□ -2.03
HRD3YLR207W YGR266WP53326 701 aa2.38□□□□□ -2.03
HRD3YLR207W SMA1Q02651 245 aa2.38□□□□□ -2.03
HRD3YLR207W PFA5Q03289 374 aa2.38□□□□□ -2.03
HRD3YLR207W MYO5Q04439 1219 aaKnown RBP2.38□□□□□ -2.03
HRD3YLR207W YPR172WQ06608 200 aa2.38□□□□□ -2.03
HRD3YLR207W ECM30Q06673 1274 aa2.38□□□□□ -2.03
HRD3YLR207W TEN1Q07921 160 aa2.38□□□□□ -2.03
HRD3YLR207W YRM1Q12340 786 aa2.38□□□□□ -2.03
HRD3YLR207W MTR10Q99189 972 aa2.38□□□□□ -2.03
HRD3YLR207W RPN13O13563 156 aa2.37□□□□□ -2.03
HRD3YLR207W SAT4P25333 603 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W SPC110P32380 944 aa2.37□□□□□ -2.03
HRD3YLR207W ECM25P32525 599 aa2.37□□□□□ -2.03
HRD3YLR207W UTR4P32626 227 aa2.37□□□□□ -2.03
HRD3YLR207W PRX1P34227 261 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W MRPL37P36532 105 aa2.37□□□□□ -2.03
HRD3YLR207W RPL32P38061 130 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W DBP8P38719 431 aa2.37□□□□□ -2.03
HRD3YLR207W RIX1P38883 763 aaPredicted RBP2.37□□□□□ -2.03
HRD3YLR207W END3P39013 349 aa2.37□□□□□ -2.03
HRD3YLR207W MNN9P39107 395 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W CIN4P39110 191 aa2.37□□□□□ -2.03
HRD3YLR207W MIT1P40002 666 aa2.37□□□□□ -2.03
HRD3YLR207W ELP2P42935 788 aa2.37□□□□□ -2.03
HRD3YLR207W SAD1P43589 448 aa2.37□□□□□ -2.03
HRD3YLR207W NMD5P46970 1048 aa2.37□□□□□ -2.03
HRD3YLR207W SCS3P53012 380 aa2.37□□□□□ -2.03
HRD3YLR207W SUN4P53616 420 aa2.37□□□□□ -2.03
HRD3YLR207W COP1P53622 1201 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W KAP95Q06142 861 aaKnown RBP2.37□□□□□ -2.03
HRD3YLR207W DSE3Q08729 430 aa2.37□□□□□ -2.03
HRD3YLR207W VAM3Q12241 283 aa2.37□□□□□ -2.03
HRD3YLR207W VPS63O13549 108 aa2.37□□□□□ -2.03
HRD3YLR207W ERG11P10614 530 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms