RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W BNR1P40450 1375 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-HO13535 1793 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-DR5P0C2I2 1755 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-DR6P0C2I3 1755 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-LR2P0C2I5 1755 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-LR3P0C2I6 1755 aaKnown RBP6.53□□□□□ -1.36
NMD5YJR132W TY1B-PR1P0C2I9 1755 aaKnown RBP6.53□□□□□ -1.36
NMD5YJR132W TY1B-PR2P0C2J0 1756 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-PR3P0C2J1 1755 aaKnown RBP6.53□□□□□ -1.36
NMD5YJR132W TY1B-JR1P47098 1755 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-ML2Q03434 1755 aaKnown RBP6.53□□□□□ -1.36
NMD5YJR132W TY1B-ER1Q03612 1755 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-ML1Q04711 1755 aaKnown RBP6.53□□□□□ -1.36
NMD5YJR132W TY1B-GR2Q12269 1755 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-OLQ12273 1755 aa6.53□□□□□ -1.36
NMD5YJR132W TY1B-PLQ12414 1755 aaKnown RBP6.53□□□□□ -1.36
NMD5YJR132W DNA2P38859 1522 aa6.53□□□□□ -1.36
NMD5YJR132W CMD1P06787 147 aaKnown RBP6.53□□□□□ -1.36
NMD5YJR132W PYC1P11154 1178 aaKnown RBP6.53□□□□□ -1.36
NMD5YJR132W INO1P11986 533 aa6.53□□□□□ -1.36
NMD5YJR132W COQ1P18900 473 aa6.53□□□□□ -1.36
NMD5YJR132W SLY1P22213 666 aa6.53□□□□□ -1.36
NMD5YJR132W VBA3P25594 458 aa6.53□□□□□ -1.36
NMD5YJR132W AIM29P36154 155 aa6.53□□□□□ -1.36
NMD5YJR132W TAT1P38085 619 aa6.53□□□□□ -1.36
NMD5YJR132W YNG2P38806 282 aaKnown RBP6.53□□□□□ -1.36
NMD5YJR132W VNX1P42839 908 aa6.53□□□□□ -1.36
NMD5YJR132W LSB6P42951 607 aa6.53□□□□□ -1.36
NMD5YJR132W RFX1P48743 811 aa6.53□□□□□ -1.36
NMD5YJR132W RSM27P53305 110 aa6.53□□□□□ -1.36
NMD5YJR132W COS6P53344 381 aa6.53□□□□□ -1.36
NMD5YJR132W TEP1P53916 434 aa6.53□□□□□ -1.36
NMD5YJR132W SKG3Q06315 1026 aa6.53□□□□□ -1.36
NMD5YJR132W YLR036CQ07986 203 aa6.53□□□□□ -1.36
NMD5YJR132W YTM1Q12024 460 aaPredicted RBP6.53□□□□□ -1.36
NMD5YJR132W ATG34Q12292 412 aa6.53□□□□□ -1.36
NMD5YJR132W RMP1Q12530 201 aa6.53□□□□□ -1.36
NMD5YJR132W ARG4P04076 463 aaPredicted RBP6.53□□□□□ -1.36
NMD5YJR132W DCC1P25559 380 aa6.53□□□□□ -1.36
NMD5YJR132W PDR3P33200 976 aa6.53□□□□□ -1.36
NMD5YJR132W SKG1P36169 355 aa6.53□□□□□ -1.36
NMD5YJR132W YHR202WP38887 602 aa6.53□□□□□ -1.36
NMD5YJR132W RMD6P39975 231 aa6.53□□□□□ -1.36
NMD5YJR132W IDP2P41939 412 aa6.53□□□□□ -1.36
NMD5YJR132W YAR1P46683 200 aa6.53□□□□□ -1.36
NMD5YJR132W YJR115WP47152 169 aa6.53□□□□□ -1.36
NMD5YJR132W ADY4Q05955 493 aa6.53□□□□□ -1.36
NMD5YJR132W BAG7Q12128 409 aa6.53□□□□□ -1.36
NMD5YJR132W ATG31Q12421 196 aa6.53□□□□□ -1.36
NMD5YJR132W SNF8Q12483 233 aa6.53□□□□□ -1.36
NMD5YJR132W SNA3P14359 133 aa6.52□□□□□ -1.37
NMD5YJR132W LHP1P33399 275 aaKnown RBP6.52□□□□□ -1.37
NMD5YJR132W PTC1P35182 281 aa6.52□□□□□ -1.37
NMD5YJR132W ARC1P46672 376 aaKnown RBP6.52□□□□□ -1.37
NMD5YJR132W CTH1P47976 325 aa6.52□□□□□ -1.37
NMD5YJR132W NQM1P53228 333 aaPredicted RBP6.52□□□□□ -1.37
NMD5YJR132W CAF40P53829 373 aa6.52□□□□□ -1.37
NMD5YJR132W AQR1P53943 586 aa6.52□□□□□ -1.37
NMD5YJR132W YPL034WQ03083 165 aa6.52□□□□□ -1.37
NMD5YJR132W SFH1Q06168 426 aa6.52□□□□□ -1.37
NMD5YJR132W YDR306CQ06640 478 aa6.52□□□□□ -1.37
NMD5YJR132W BSC6Q08280 497 aa6.52□□□□□ -1.37
NMD5YJR132W DGK1Q12382 290 aa6.52□□□□□ -1.37
NMD5YJR132W RPL1AP0CX43 217 aaKnown RBP6.52□□□□□ -1.37
NMD5YJR132W RPL1BP0CX44 217 aaKnown RBP6.52□□□□□ -1.37
NMD5YJR132W MCH2P36032 473 aa6.52□□□□□ -1.37
NMD5YJR132W SSU1P41930 458 aa6.52□□□□□ -1.37
NMD5YJR132W RPE1P46969 238 aa6.52□□□□□ -1.37
NMD5YJR132W GEA1P47102 1408 aaPredicted RBP6.52□□□□□ -1.37
NMD5YJR132W PEX13P80667 386 aa6.52□□□□□ -1.37
NMD5YJR132W TIM44Q01852 431 aa6.52□□□□□ -1.37
NMD5YJR132W HLR1Q04429 423 aa6.52□□□□□ -1.37
NMD5YJR132W RCL1Q08096 367 aaPredicted RBP6.52□□□□□ -1.37
NMD5YJR132W SAM3Q08986 587 aa6.52□□□□□ -1.37
NMD5YJR132W EMP46Q12396 444 aa6.52□□□□□ -1.37
NMD5YJR132W VPS15P22219 1454 aa6.52□□□□□ -1.37
NMD5YJR132W TDH2P00358 332 aaKnown RBP6.52□□□□□ -1.37
NMD5YJR132W TDH3P00359 332 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
NMD5YJR132W LEU2P04173 364 aaPredicted RBP6.52□□□□□ -1.37
NMD5YJR132W ILV2P07342 687 aaKnown RBP6.52□□□□□ -1.37
NMD5YJR132W SPS4P09937 338 aa6.52□□□□□ -1.37
NMD5YJR132W RPL27AP0C2H6 136 aaKnown RBP6.52□□□□□ -1.37
NMD5YJR132W RPL27BP0C2H7 136 aaKnown RBP6.52□□□□□ -1.37
NMD5YJR132W ZRC1P20107 442 aa6.52□□□□□ -1.37
NMD5YJR132W ERV1P27882 189 aa6.52□□□□□ -1.37
NMD5YJR132W ACH1P32316 526 aa6.52□□□□□ -1.37
NMD5YJR132W HOG1P32485 435 aa6.52□□□□□ -1.37
NMD5YJR132W JHD1P40034 492 aa6.52□□□□□ -1.37
NMD5YJR132W PHO86P46956 311 aa6.52□□□□□ -1.37
NMD5YJR132W EFM3P47163 339 aa6.52□□□□□ -1.37
NMD5YJR132W RTT102P53330 157 aa6.52□□□□□ -1.37
NMD5YJR132W SPC98P53540 846 aa6.52□□□□□ -1.37
NMD5YJR132W ADI1Q03677 179 aa6.52□□□□□ -1.37
NMD5YJR132W GIS4Q04233 774 aa6.52□□□□□ -1.37
NMD5YJR132W FRA1Q07825 749 aa6.52□□□□□ -1.37
NMD5YJR132W RCN2Q12044 265 aa6.52□□□□□ -1.37
NMD5YJR132W RKR1Q04781 1562 aa6.51□□□□□ -1.37
NMD5YJR132W MRP2P10663 115 aaPredicted RBP6.51□□□□□ -1.37
NMD5YJR132W SCH9P11792 824 aaKnown RBP6.51□□□□□ -1.37
NMD5YJR132W ATP12P22135 325 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms