RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B SPH1Q06160 661 aa1.56□□□□□ -2.16
YGR109W-BYGR109W-B SNA4Q07549 140 aa1.56□□□□□ -2.16
YGR109W-BYGR109W-B CWC2Q12046 339 aaPredicted RBP1.56□□□□□ -2.16
YGR109W-BYGR109W-B YLR049CQ12110 428 aa1.56□□□□□ -2.16
YGR109W-BYGR109W-B IZH4Q99393 312 aa1.56□□□□□ -2.16
YGR109W-BYGR109W-B YIL177CP40434 1758 aa1.56□□□□□ -2.16
YGR109W-BYGR109W-B YJL225CP40889 1758 aa1.56□□□□□ -2.16
YGR109W-BYGR109W-B IRA1P18963 3092 aa1.56□□□□□ -2.16
YGR109W-BYGR109W-B GCN2P15442 1659 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B CDC37P06101 506 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B RAD7P06779 565 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B SPT3P06844 337 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B DPB2P24482 689 aaPredicted RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B HEM12P32347 362 aaPredicted RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B OCT1P35999 772 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B BYE1P36106 594 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B APM3P38153 483 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B CTM1P38818 585 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B ZAP1P47043 880 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B MOG1P47123 218 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B VPS25P47142 202 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YDR131CQ03899 556 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B SMF3Q12078 473 aaPredicted RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B YBR085C-AO43137 85 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B MF(ALPHA)1P01149 165 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B DAL5P15365 543 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B PDX1P16451 410 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B FAR1P21268 830 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B PTC6P25646 442 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B SOF1P33750 489 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B TUL1P36096 758 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B EFM2P38347 419 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B SCC4P40090 624 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B HIS6P40545 261 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B GTR2P53290 341 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YNR071CP53757 342 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YNL260CP53846 198 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B TRS130Q03660 1102 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YPR172WQ06608 200 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B POS5Q06892 414 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B DTD1Q07648 150 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B AAD4Q07747 329 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B CSM4Q08955 156 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YPL272CQ08984 517 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B VPS54Q12071 889 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B AEP3Q12089 606 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B ARG3P05150 338 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B MSS18P08593 268 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B MRP2P10663 115 aaPredicted RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B BIK1P11709 440 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YCR016WP25617 290 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B CRM1P30822 1084 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B ZUO1P32527 433 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B YME1P32795 747 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B PCF11P39081 626 aaPredicted RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B NPT1P39683 429 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B YER130CP39959 443 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B PRE6P40303 254 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B MAM33P40513 266 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B ELP2P42935 788 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B AIP1P46680 615 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B MDE1P47095 244 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B TWF1P53250 332 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B OCA2P53949 197 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B EFM6P53970 246 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B BET4Q00618 327 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B LAP3Q01532 483 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
YGR109W-BYGR109W-B ARO80Q04052 950 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B CAC2Q04199 468 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B APC4Q04601 652 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YOL075CQ08234 1294 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B SAM4Q08985 325 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B RPP0P05317 312 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B LAC1P28496 418 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B HSP104P31539 908 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B VPS17P32913 551 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B TFC4P33339 1025 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YKL023WP36103 277 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B DAD2P36162 133 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B ARC40P38328 384 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B AIM2P39721 246 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YPT11P48559 417 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B LYS20P48570 428 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B KTR6P54070 446 aa1.55□□□□□ -2.16
YGR109W-BYGR109W-B YVH1Q02256 364 aaKnown RBP1.55□□□□□ -2.16
YGR109W-BYGR109W-B PMR1P13586 950 aa1.54□□□□□ -2.16
YGR109W-BYGR109W-B PHO3P24031 467 aa1.54□□□□□ -2.16
YGR109W-BYGR109W-B IDH1P28834 360 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
YGR109W-BYGR109W-B MRE11P32829 692 aa1.54□□□□□ -2.16
YGR109W-BYGR109W-B RIB5P38145 238 aa1.54□□□□□ -2.16
YGR109W-BYGR109W-B YBR071WP38243 211 aa1.54□□□□□ -2.16
YGR109W-BYGR109W-B DED81P38707 554 aaKnown RBP1.54□□□□□ -2.16
YGR109W-BYGR109W-B MAD2P40958 196 aa1.54□□□□□ -2.16
YGR109W-BYGR109W-B CDC40P40968 455 aaPredicted RBP1.54□□□□□ -2.16
YGR109W-BYGR109W-B BNA6P43619 295 aa1.54□□□□□ -2.16
YGR109W-BYGR109W-B TRM112P53738 135 aaPredicted RBP1.54□□□□□ -2.16
YGR109W-BYGR109W-B PGA2P53903 129 aa1.54□□□□□ -2.16
YGR109W-BYGR109W-B YNL034WP53963 612 aa1.54□□□□□ -2.16
YGR109W-BYGR109W-B CEG1Q01159 459 aaPredicted RBP1.54□□□□□ -2.16
YGR109W-BYGR109W-B SKI8Q02793 397 aaPredicted RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms