RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W DPB4Q04603 196 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W MHR1Q06630 226 aa1.14□□□□□ -2.23
SMC1YFL008W RSA1Q08932 381 aa1.14□□□□□ -2.23
SMC1YFL008W YLR049CQ12110 428 aa1.14□□□□□ -2.23
SMC1YFL008W YJR112W-AQ3E743 109 aa1.14□□□□□ -2.23
SMC1YFL008W MES1P00958 751 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W RNA1P11745 407 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W ARO3P14843 370 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W NOP1P15646 327 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W CDC60P26637 1090 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W SIN4P32259 974 aa1.14□□□□□ -2.23
SMC1YFL008W NUP120P35729 1037 aa1.14□□□□□ -2.23
SMC1YFL008W PRE5P40302 234 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W YGL260WP53056 76 aa1.14□□□□□ -2.23
SMC1YFL008W ELP3Q02908 557 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W YML037CQ03703 340 aa1.14□□□□□ -2.23
SMC1YFL008W EMI2Q04409 500 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W RQC1Q05468 723 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W BUD21Q08492 214 aaPredicted RBP1.14□□□□□ -2.23
SMC1YFL008W COR1P07256 457 aa1.13□□□□□ -2.23
SMC1YFL008W MCM4P30665 933 aaKnown RBP1.13□□□□□ -2.23
SMC1YFL008W SSH4P32343 579 aa1.13□□□□□ -2.23
SMC1YFL008W YKL050CP35736 922 aa1.13□□□□□ -2.23
SMC1YFL008W MSR1P38714 643 aa1.13□□□□□ -2.23
SMC1YFL008W SMF1P38925 575 aa1.13□□□□□ -2.23
SMC1YFL008W FAR3P46671 204 aa1.13□□□□□ -2.23
SMC1YFL008W CBS1P14066 229 aa1.13□□□□□ -2.23
SMC1YFL008W LCB1P25045 558 aaKnown RBP1.13□□□□□ -2.23
SMC1YFL008W LDB16P25587 256 aa1.13□□□□□ -2.23
SMC1YFL008W IDH2P28241 369 aaKnown RBP1.13□□□□□ -2.23
SMC1YFL008W MRS6P32864 603 aaKnown RBP1.13□□□□□ -2.23
SMC1YFL008W PMU1P36069 295 aa1.13□□□□□ -2.23
SMC1YFL008W SNG1P46950 547 aa1.13□□□□□ -2.23
SMC1YFL008W BRO1P48582 844 aa1.13□□□□□ -2.23
SMC1YFL008W AVT4P50944 713 aa1.13□□□□□ -2.23
SMC1YFL008W SMM1P53720 384 aaKnown RBP1.13□□□□□ -2.23
SMC1YFL008W NUS1Q12063 375 aa1.13□□□□□ -2.23
SMC1YFL008W SET6Q12529 373 aa1.13□□□□□ -2.23
SMC1YFL008W ATP10P18496 279 aa1.13□□□□□ -2.23
SMC1YFL008W CPR3P25719 182 aa1.13□□□□□ -2.23
SMC1YFL008W VPS17P32913 551 aa1.13□□□□□ -2.23
SMC1YFL008W MSG5P38590 489 aa1.13□□□□□ -2.23
SMC1YFL008W MDM31P38880 579 aa1.13□□□□□ -2.23
SMC1YFL008W FAA2P39518 744 aa1.13□□□□□ -2.23
SMC1YFL008W ALD5P40047 520 aaKnown RBP1.13□□□□□ -2.23
SMC1YFL008W PET130P47065 347 aa1.13□□□□□ -2.23
SMC1YFL008W TCB2P48231 1178 aa1.13□□□□□ -2.23
SMC1YFL008W SOV1Q04748 898 aa1.13□□□□□ -2.23
SMC1YFL008W SSK1Q07084 712 aa1.13□□□□□ -2.23
SMC1YFL008W PSR1Q07800 427 aa1.13□□□□□ -2.23
SMC1YFL008W MCT1Q12283 360 aa1.13□□□□□ -2.23
SMC1YFL008W RRP12Q12754 1228 aaKnown RBP1.13□□□□□ -2.23
SMC1YFL008W MF(ALPHA)1P01149 165 aa1.12□□□□□ -2.23
SMC1YFL008W ARG81P05085 880 aa1.12□□□□□ -2.23
SMC1YFL008W DFR1P07807 211 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
SMC1YFL008W CLN3P13365 580 aa1.12□□□□□ -2.23
SMC1YFL008W EST1P17214 699 aaPredicted RBP1.12□□□□□ -2.23
SMC1YFL008W BOS1P25385 244 aa1.12□□□□□ -2.23
SMC1YFL008W SHP1P34223 423 aa1.12□□□□□ -2.23
SMC1YFL008W YJL213WP40896 331 aa1.12□□□□□ -2.23
SMC1YFL008W FCP1Q03254 732 aa1.12□□□□□ -2.23
SMC1YFL008W YDL057WQ07379 328 aa1.12□□□□□ -2.23
SMC1YFL008W PLP2Q12017 286 aa1.12□□□□□ -2.23
SMC1YFL008W ERG27Q12452 347 aaKnown RBP1.12□□□□□ -2.23
SMC1YFL008W YDL012CQ12489 107 aa1.12□□□□□ -2.23
SMC1YFL008W SEC39Q12745 709 aa1.12□□□□□ -2.23
SMC1YFL008W RPO41P13433 1351 aaKnown RBP1.12□□□□□ -2.23
SMC1YFL008W ARG3P05150 338 aa1.12□□□□□ -2.23
SMC1YFL008W HEM15P16622 393 aa1.12□□□□□ -2.23
SMC1YFL008W RML2P32611 393 aa1.12□□□□□ -2.23
SMC1YFL008W CNS1P33313 385 aa1.12□□□□□ -2.23
SMC1YFL008W NAB3P38996 802 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
SMC1YFL008W MST28P39552 234 aa1.12□□□□□ -2.23
SMC1YFL008W PTI1P39927 425 aaPredicted RBP1.12□□□□□ -2.23
SMC1YFL008W SAS2P40963 338 aa1.12□□□□□ -2.23
SMC1YFL008W ABM1P47146 123 aa1.12□□□□□ -2.23
SMC1YFL008W DIA3P52290 468 aa1.12□□□□□ -2.23
SMC1YFL008W RBG2P53295 368 aaKnown RBP1.12□□□□□ -2.23
SMC1YFL008W FMP40Q08968 688 aaPredicted RBP1.12□□□□□ -2.23
SMC1YFL008W RBD2Q12270 262 aa1.12□□□□□ -2.23
SMC1YFL008W HRT3Q12347 344 aa1.12□□□□□ -2.23
SMC1YFL008W LPD1P09624 499 aaKnown RBP1.12□□□□□ -2.23
SMC1YFL008W PDA1P16387 420 aaKnown RBP1.12□□□□□ -2.23
SMC1YFL008W URA7P28274 579 aaKnown RBP1.12□□□□□ -2.23
SMC1YFL008W CBF5P33322 483 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
SMC1YFL008W PMT1P33775 817 aa1.12□□□□□ -2.23
SMC1YFL008W MIC60P36112 540 aa1.12□□□□□ -2.23
SMC1YFL008W BNA4P38169 460 aa1.12□□□□□ -2.23
SMC1YFL008W DBP8P38719 431 aa1.12□□□□□ -2.23
SMC1YFL008W MRPL51Q06090 140 aaPredicted RBP1.12□□□□□ -2.23
SMC1YFL008W RLP24Q07915 199 aaKnown RBP1.12□□□□□ -2.23
SMC1YFL008W GAL80P04387 435 aa1.11□□□□□ -2.23
SMC1YFL008W RPL31BP0C2H9 113 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W PHA2P32452 334 aa1.11□□□□□ -2.23
SMC1YFL008W GLC7P32598 312 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W NFU1P32860 256 aa1.11□□□□□ -2.23
SMC1YFL008W NIP100P33420 868 aa1.11□□□□□ -2.23
SMC1YFL008W YKL097CP34245 136 aa1.11□□□□□ -2.23
SMC1YFL008W YKL023WP36103 277 aaKnown RBP1.11□□□□□ -2.23
SMC1YFL008W CIN4P39110 191 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms