RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B MST28P39552 234 aa0.49□□□□□ -2.33
SBH1YER087C-B VPS52P39904 641 aa0.49□□□□□ -2.33
SBH1YER087C-B NDE1P40215 560 aa0.49□□□□□ -2.33
SBH1YER087C-B YPS6P40583 537 aa0.49□□□□□ -2.33
SBH1YER087C-B REE1P40893 198 aa0.49□□□□□ -2.33
SBH1YER087C-B SAS2P40963 338 aa0.49□□□□□ -2.33
SBH1YER087C-B GCD10P41814 478 aa0.49□□□□□ -2.33
SBH1YER087C-B ELP2P42935 788 aa0.49□□□□□ -2.33
SBH1YER087C-B BUD27P43573 796 aaKnown RBP RIP-Chip data0.49□□□□□ -2.33not detected
SBH1YER087C-B ECM27P47144 725 aa0.49□□□□□ -2.33
SBH1YER087C-B YGR149WP48236 432 aa0.49□□□□□ -2.33
SBH1YER087C-B TOM22P49334 152 aa0.49□□□□□ -2.33
SBH1YER087C-B YML6P51998 286 aa0.49□□□□□ -2.33
SBH1YER087C-B LCL3P53153 274 aa0.49□□□□□ -2.33
SBH1YER087C-B MTM1P53320 366 aa0.49□□□□□ -2.33
SBH1YER087C-B YNR048WP53740 393 aa0.49□□□□□ -2.33
SBH1YER087C-B DSL1P53847 754 aa0.49□□□□□ -2.33
SBH1YER087C-B DUG3P53871 357 aa0.49□□□□□ -2.33
SBH1YER087C-B HXT11P54862 567 aa0.49□□□□□ -2.33
SBH1YER087C-B RPA49Q01080 415 aaPredicted RBP0.49□□□□□ -2.33
SBH1YER087C-B MDM1Q01846 1127 aa0.49□□□□□ -2.33
SBH1YER087C-B RPT6Q01939 405 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B SKO1Q02100 647 aa0.49□□□□□ -2.33
SBH1YER087C-B HER2Q03557 464 aa0.49□□□□□ -2.33
SBH1YER087C-B TAF12Q03761 539 aa0.49□□□□□ -2.33
SBH1YER087C-B PRP42Q03776 544 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B YDR131CQ03899 556 aa0.49□□□□□ -2.33
SBH1YER087C-B SPC19Q03954 165 aa0.49□□□□□ -2.33
SBH1YER087C-B SYF1Q04048 859 aaPredicted RBP0.49□□□□□ -2.33
SBH1YER087C-B RPN9Q04062 393 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B URH1Q04179 340 aa0.49□□□□□ -2.33
SBH1YER087C-B HEL2Q05580 639 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B RRP45Q05636 305 aaKnown RBP0.49□□□□□ -2.33
SBH1YER087C-B FMP45Q07651 309 aa0.49□□□□□ -2.33
SBH1YER087C-B YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.49□□□□□ -2.33not detected
SBH1YER087C-B ESA1Q08649 445 aa0.49□□□□□ -2.33
SBH1YER087C-B MUM3Q08750 479 aa0.49□□□□□ -2.33
SBH1YER087C-B PLP2Q12017 286 aa0.49□□□□□ -2.33
SBH1YER087C-B MED2Q12124 431 aa0.49□□□□□ -2.33
SBH1YER087C-B RUP1Q12242 671 aa0.49□□□□□ -2.33
SBH1YER087C-B YLR108CQ12259 485 aa0.49□□□□□ -2.33
SBH1YER087C-B ERV2Q12284 196 aa0.49□□□□□ -2.33
SBH1YER087C-B RKM5Q12367 367 aa0.49□□□□□ -2.33
SBH1YER087C-B ORT1Q12375 292 aa0.49□□□□□ -2.33
SBH1YER087C-B RMD5Q12508 421 aa0.49□□□□□ -2.33
SBH1YER087C-B SET6Q12529 373 aa0.49□□□□□ -2.33
SBH1YER087C-B YER078W-AQ3E7A2 54 aa0.49□□□□□ -2.33
SBH1YER087C-B YCL021W-AQ96VH3 125 aa0.49□□□□□ -2.33
SBH1YER087C-B RAD61Q99359 647 aa0.49□□□□□ -2.33
SBH1YER087C-B RAV1P47104 1357 aa0.48□□□□□ -2.33
SBH1YER087C-B SOD1P00445 154 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B MES1P00958 751 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B INH1P01097 85 aa0.48□□□□□ -2.33
SBH1YER087C-B HHF1P02309 103 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B TEF1P02994 458 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B SCEIP03882 235 aa0.48□□□□□ -2.33
SBH1YER087C-B CHS1P08004 1131 aa0.48□□□□□ -2.33
SBH1YER087C-B YAR066WP0CX18 203 aa0.48□□□□□ -2.33
SBH1YER087C-B YHR214WP0CX19 203 aa0.48□□□□□ -2.33
SBH1YER087C-B CPR1P14832 162 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B RPB5P20434 215 aa0.48□□□□□ -2.33
SBH1YER087C-B ISY1P21374 235 aaPredicted RBP0.48□□□□□ -2.33
SBH1YER087C-B REC107P21651 314 aa0.48□□□□□ -2.33
SBH1YER087C-B PPH22P23595 377 aa0.48□□□□□ -2.33
SBH1YER087C-B CLB3P24870 427 aa0.48□□□□□ -2.33
SBH1YER087C-B CPR4P25334 318 aa0.48□□□□□ -2.33
SBH1YER087C-B URA7P28274 579 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B YIM1P28625 365 aa0.48□□□□□ -2.33
SBH1YER087C-B ITR1P30605 584 aa0.48□□□□□ -2.33
SBH1YER087C-B DEG1P31115 442 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B SMY1P32364 656 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B HIR2P32480 875 aa0.48□□□□□ -2.33
SBH1YER087C-B KAR9P32526 644 aa0.48□□□□□ -2.33
SBH1YER087C-B SPR1P32603 445 aa0.48□□□□□ -2.33
SBH1YER087C-B YBL059WP34224 193 aa0.48□□□□□ -2.33
SBH1YER087C-B RRP1P35178 278 aaPredicted RBP0.48□□□□□ -2.33
SBH1YER087C-B FRE2P36033 711 aa0.48□□□□□ -2.33
SBH1YER087C-B BYE1P36106 594 aa0.48□□□□□ -2.33
SBH1YER087C-B NAT2P37293 288 aa0.48□□□□□ -2.33
SBH1YER087C-B RIB5P38145 238 aa0.48□□□□□ -2.33
SBH1YER087C-B RRP4P38792 359 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B KEL1P38853 1164 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B PCF11P39081 626 aaPredicted RBP0.48□□□□□ -2.33
SBH1YER087C-B YAL037WP39728 267 aa0.48□□□□□ -2.33
SBH1YER087C-B AFG3P39925 761 aa0.48□□□□□ -2.33
SBH1YER087C-B ISC1P40015 477 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B SYG1P40528 902 aa0.48□□□□□ -2.33
SBH1YER087C-B POP1P41812 875 aa0.48□□□□□ -2.33
SBH1YER087C-B YGR210CP42942 411 aa0.48□□□□□ -2.33
SBH1YER087C-B RPS0BP46654 252 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B AVT4P50944 713 aa0.48□□□□□ -2.33
SBH1YER087C-B OCA1P50946 238 aaPredicted RBP0.48□□□□□ -2.33
SBH1YER087C-B YIP1P53039 248 aa0.48□□□□□ -2.33
SBH1YER087C-B YGL138CP53122 345 aa0.48□□□□□ -2.33
SBH1YER087C-B YGL039WP53183 348 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B POP6P53218 158 aa0.48□□□□□ -2.33
SBH1YER087C-B CAF130P53280 1122 aaPredicted RBP0.48□□□□□ -2.33
SBH1YER087C-B YGR250CP53316 781 aaKnown RBP0.48□□□□□ -2.33
SBH1YER087C-B FRE4P53746 719 aa0.48□□□□□ -2.33
SBH1YER087C-B YLR152CP54072 576 aa0.48□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms