RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W RPL31BP0C2H9 113 aaKnown RBP1.36□□□□□ -2.19
LCD1YDR499W ATP11P32453 318 aa1.36□□□□□ -2.19
LCD1YDR499W PMT1P33775 817 aa1.36□□□□□ -2.19
LCD1YDR499W KEL1P38853 1164 aaKnown RBP1.36□□□□□ -2.19
LCD1YDR499W SMF1P38925 575 aa1.36□□□□□ -2.19
LCD1YDR499W ISC1P40015 477 aaKnown RBP1.36□□□□□ -2.19
LCD1YDR499W SYG1P40528 902 aa1.36□□□□□ -2.19
LCD1YDR499W HXT14P42833 540 aa1.36□□□□□ -2.19
LCD1YDR499W RQC1Q05468 723 aaKnown RBP1.36□□□□□ -2.19
LCD1YDR499W PGA3Q12746 312 aaKnown RBP1.36□□□□□ -2.19
LCD1YDR499W CCH1P50077 2039 aa1.36□□□□□ -2.19
LCD1YDR499W YCR100CP25606 316 aa1.35□□□□□ -2.19
LCD1YDR499W CRM1P30822 1084 aaKnown RBP1.35□□□□□ -2.19
LCD1YDR499W ERG3P32353 365 aa1.35□□□□□ -2.19
LCD1YDR499W MFT1P33441 392 aaKnown RBP1.35□□□□□ -2.19
LCD1YDR499W STB6P36085 766 aa1.35□□□□□ -2.19
LCD1YDR499W OTU2P38747 307 aaKnown RBP1.35□□□□□ -2.19
LCD1YDR499W VMA13P41807 478 aaKnown RBP1.35□□□□□ -2.19
LCD1YDR499W SRB7P47822 140 aa1.35□□□□□ -2.19
LCD1YDR499W YGL108CP53139 140 aa1.35□□□□□ -2.19
LCD1YDR499W PEX25Q02969 394 aa1.35□□□□□ -2.19
LCD1YDR499W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
LCD1YDR499W RTN2Q12443 393 aa1.35□□□□□ -2.19
LCD1YDR499W YML133CQ03099 1374 aa1.35□□□□□ -2.19
LCD1YDR499W YLL067CQ07888 1374 aa1.35□□□□□ -2.19
LCD1YDR499W YLL066CQ99208 1374 aa1.35□□□□□ -2.19
LCD1YDR499W RED1P14291 827 aa1.35□□□□□ -2.19
LCD1YDR499W SPB1P25582 841 aaPredicted RBP1.35□□□□□ -2.19
LCD1YDR499W MIX23P38162 196 aa1.35□□□□□ -2.19
LCD1YDR499W MSG5P38590 489 aa1.35□□□□□ -2.19
LCD1YDR499W POP1P41812 875 aa1.35□□□□□ -2.19
LCD1YDR499W OCA1P50946 238 aaPredicted RBP1.35□□□□□ -2.19
LCD1YDR499W SCM3Q12334 223 aa1.35□□□□□ -2.19
LCD1YDR499W RRD2Q12461 358 aa1.35□□□□□ -2.19
LCD1YDR499W RPS8AP0CX39 200 aaKnown RBP1.34□□□□□ -2.19
LCD1YDR499W RPS8BP0CX40 200 aaKnown RBP1.34□□□□□ -2.19
LCD1YDR499W AFG1P32317 509 aa1.34□□□□□ -2.19
LCD1YDR499W HCS1P34243 683 aa1.34□□□□□ -2.19
LCD1YDR499W MRPL10P36520 322 aa1.34□□□□□ -2.19
LCD1YDR499W URB2P47108 1174 aa1.34□□□□□ -2.19
LCD1YDR499W OGG1P53397 376 aaPredicted RBP1.34□□□□□ -2.19
LCD1YDR499W KTR5P53966 522 aaPredicted RBP1.34□□□□□ -2.19
LCD1YDR499W RPA49Q01080 415 aaPredicted RBP1.34□□□□□ -2.19
LCD1YDR499W YLR287CQ05881 355 aa1.34□□□□□ -2.19
LCD1YDR499W YOL159C-AQ3E769 90 aa1.34□□□□□ -2.19
LCD1YDR499W RHO2P06781 192 aa1.34□□□□□ -2.2
LCD1YDR499W YAR066WP0CX18 203 aa1.34□□□□□ -2.2
LCD1YDR499W YHR214WP0CX19 203 aa1.34□□□□□ -2.2
LCD1YDR499W RAD14P28519 371 aa1.34□□□□□ -2.2
LCD1YDR499W HXT3P32466 567 aaKnown RBP1.34□□□□□ -2.2
LCD1YDR499W GYP6P32806 458 aa1.34□□□□□ -2.2
LCD1YDR499W NPL6P32832 435 aa1.34□□□□□ -2.2
LCD1YDR499W NFU1P32860 256 aa1.34□□□□□ -2.2
LCD1YDR499W MNS1P32906 549 aa1.34□□□□□ -2.2
LCD1YDR499W SAS3P34218 831 aa1.34□□□□□ -2.2
LCD1YDR499W THI2P38141 450 aa1.34□□□□□ -2.2
LCD1YDR499W YHR131CP38835 850 aa1.34□□□□□ -2.2
LCD1YDR499W YGR149WP48236 432 aa1.34□□□□□ -2.2
LCD1YDR499W SYF1Q04048 859 aaPredicted RBP1.34□□□□□ -2.2
LCD1YDR499W SOV1Q04748 898 aa1.34□□□□□ -2.2
LCD1YDR499W LEU4P06208 619 aaKnown RBP1.33□□□□□ -2.2
LCD1YDR499W RPL3P14126 387 aaKnown RBP1.33□□□□□ -2.2
LCD1YDR499W ATP10P18496 279 aa1.33□□□□□ -2.2
LCD1YDR499W CLB3P24870 427 aa1.33□□□□□ -2.2
LCD1YDR499W IDH2P28241 369 aaKnown RBP1.33□□□□□ -2.2
LCD1YDR499W JNM1P36224 373 aa1.33□□□□□ -2.2
LCD1YDR499W LSM5P40089 93 aaKnown RBP1.33□□□□□ -2.2
LCD1YDR499W GPD2P41911 440 aaKnown RBP1.33□□□□□ -2.2
LCD1YDR499W VTC2P43585 828 aa1.33□□□□□ -2.2
LCD1YDR499W ODC1Q03028 310 aa1.33□□□□□ -2.2
LCD1YDR499W RSN1Q03516 953 aa1.33□□□□□ -2.2
LCD1YDR499W HER2Q03557 464 aa1.33□□□□□ -2.2
LCD1YDR499W VTA1Q06263 330 aa1.33□□□□□ -2.2
LCD1YDR499W SPS4P09937 338 aa1.32□□□□□ -2.2
LCD1YDR499W HSP26P15992 214 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
LCD1YDR499W PPH22P23595 377 aa1.32□□□□□ -2.2
LCD1YDR499W PRP21P32524 280 aaPredicted RBP1.32□□□□□ -2.2
LCD1YDR499W NIP100P33420 868 aa1.32□□□□□ -2.2
LCD1YDR499W MID2P36027 376 aa1.32□□□□□ -2.2
LCD1YDR499W CBP4P37267 147 aa1.32□□□□□ -2.2
LCD1YDR499W RIB5P38145 238 aa1.32□□□□□ -2.2
LCD1YDR499W CCT2P39076 527 aaKnown RBP1.32□□□□□ -2.2
LCD1YDR499W NOC2P39744 710 aaKnown RBP1.32□□□□□ -2.2
LCD1YDR499W DLD2P46681 530 aaKnown RBP1.32□□□□□ -2.2
LCD1YDR499W MNP1P53163 194 aaPredicted RBP1.32□□□□□ -2.2
LCD1YDR499W YGR250CP53316 781 aaKnown RBP1.32□□□□□ -2.2
LCD1YDR499W NCS2P53923 493 aaPredicted RBP1.32□□□□□ -2.2
LCD1YDR499W GIR2Q03768 265 aaPredicted RBP1.32□□□□□ -2.2
LCD1YDR499W RRG1Q12167 365 aaPredicted RBP1.32□□□□□ -2.2
LCD1YDR499W GPH1P06738 902 aaKnown RBP1.32□□□□□ -2.2
LCD1YDR499W RIP1P08067 215 aa1.32□□□□□ -2.2
LCD1YDR499W FUR1P18562 216 aaKnown RBP1.32□□□□□ -2.2
LCD1YDR499W SNT1P25357 1226 aa1.32□□□□□ -2.2
LCD1YDR499W TRS85P46944 698 aa1.32□□□□□ -2.2
LCD1YDR499W RMD9P53140 646 aaKnown RBP1.32□□□□□ -2.2
LCD1YDR499W PNG1Q02890 363 aa1.32□□□□□ -2.2
LCD1YDR499W YMR155WQ03795 547 aa1.32□□□□□ -2.2
LCD1YDR499W ARX1Q03862 593 aaKnown RBP1.32□□□□□ -2.2
LCD1YDR499W HSP31Q04432 237 aa1.32□□□□□ -2.2
LCD1YDR499W ISN1Q99312 450 aa1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms