RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeastyeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS72YDR485C ATM1P40416 690 aa5.61□□□□□ -1.51
VPS72YDR485C SHQ1P40486 507 aaPredicted RBP5.61□□□□□ -1.51
VPS72YDR485C KTR6P54070 446 aa5.61□□□□□ -1.51
VPS72YDR485C PET117Q02771 107 aa5.61□□□□□ -1.51
VPS72YDR485C RRP12Q12754 1228 aaKnown RBP5.61□□□□□ -1.51
VPS72YDR485C RHO2P06781 192 aa5.6□□□□□ -1.51
VPS72YDR485C THR4P16120 514 aaKnown RBP5.6□□□□□ -1.51
VPS72YDR485C RNR3P21672 869 aaKnown RBP5.6□□□□□ -1.51
VPS72YDR485C CBF5P33322 483 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
VPS72YDR485C RRP4P38792 359 aaKnown RBP5.6□□□□□ -1.51
VPS72YDR485C CCT2P39076 527 aaKnown RBP5.6□□□□□ -1.51
VPS72YDR485C YHC3P47040 408 aa5.6□□□□□ -1.51
VPS72YDR485C VOA1P53262 265 aa5.6□□□□□ -1.51
VPS72YDR485C YPR003CP53394 754 aa5.6□□□□□ -1.51
VPS72YDR485C REX2P54964 269 aaKnown RBP5.6□□□□□ -1.51
VPS72YDR485C MRPS17Q03246 237 aaPredicted RBP5.6□□□□□ -1.51
VPS72YDR485C AIM45Q12480 344 aaKnown RBP5.6□□□□□ -1.51
VPS72YDR485C LAM4P38800 1345 aa5.6□□□□□ -1.51
VPS72YDR485C CDC36P06100 191 aaPredicted RBP5.6□□□□□ -1.51
VPS72YDR485C MSS116P15424 664 aaKnown RBP5.6□□□□□ -1.51
VPS72YDR485C DAL81P21657 970 aa5.6□□□□□ -1.51
VPS72YDR485C ADY2P25613 283 aa5.6□□□□□ -1.51
VPS72YDR485C YPS1P32329 569 aa5.6□□□□□ -1.51
VPS72YDR485C PRP21P32524 280 aaPredicted RBP5.6□□□□□ -1.51
VPS72YDR485C IMP3P32899 183 aaPredicted RBP5.6□□□□□ -1.51
VPS72YDR485C ALP1P38971 573 aa5.6□□□□□ -1.51
VPS72YDR485C FMP52P40008 231 aa5.6□□□□□ -1.51
VPS72YDR485C TOS3P43637 560 aa5.6□□□□□ -1.51
VPS72YDR485C ATG4P53867 494 aa5.6□□□□□ -1.51
VPS72YDR485C YDL057WQ07379 328 aa5.6□□□□□ -1.51
VPS72YDR485C ENB1Q08299 606 aa5.6□□□□□ -1.51
VPS72YDR485C RMD5Q12508 421 aa5.6□□□□□ -1.51
VPS72YDR485C CFT1Q06632 1357 aaKnown RBP5.6□□□□□ -1.51
VPS72YDR485C MSF1P08425 469 aa5.59□□□□□ -1.51
VPS72YDR485C SOR1P35497 357 aaKnown RBP5.59□□□□□ -1.51
VPS72YDR485C YKR015CP36111 568 aa5.59□□□□□ -1.51
VPS72YDR485C TCM62P38228 572 aaKnown RBP5.59□□□□□ -1.51
VPS72YDR485C IML3P38265 245 aa5.59□□□□□ -1.51
VPS72YDR485C FMP33P46998 180 aa5.59□□□□□ -1.51
VPS72YDR485C PGA2P53903 129 aa5.59□□□□□ -1.51
VPS72YDR485C APC4Q04601 652 aa5.59□□□□□ -1.51
VPS72YDR485C SNT309Q06091 175 aaPredicted RBP5.59□□□□□ -1.51
VPS72YDR485C SOR2Q07786 357 aa5.59□□□□□ -1.51
VPS72YDR485C TGS1Q12052 315 aa5.59□□□□□ -1.51
VPS72YDR485C RAV1P47104 1357 aa5.59□□□□□ -1.51
VPS72YDR485C ERG11P10614 530 aa5.59□□□□□ -1.51
VPS72YDR485C GBP2P25555 427 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
VPS72YDR485C GID7P25569 745 aa5.59□□□□□ -1.51
VPS72YDR485C HSP104P31539 908 aaKnown RBP5.59□□□□□ -1.51
VPS72YDR485C SPR1P32603 445 aa5.59□□□□□ -1.51
VPS72YDR485C NRP1P32770 719 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
VPS72YDR485C HIS7P33734 552 aaKnown RBP5.59□□□□□ -1.51
VPS72YDR485C SBE22P38814 852 aa5.59□□□□□ -1.51
VPS72YDR485C RCY1P39531 840 aa5.59□□□□□ -1.51
VPS72YDR485C SNO2P53823 222 aa5.59□□□□□ -1.51
VPS72YDR485C RTC1Q08281 1341 aa5.58□□□□□ -1.52
VPS72YDR485C GPA1P08539 472 aa5.58□□□□□ -1.52
VPS72YDR485C LST4P34239 828 aa5.58□□□□□ -1.52
VPS72YDR485C APL3P38065 1025 aa5.58□□□□□ -1.52
VPS72YDR485C SPC97P38863 823 aa5.58□□□□□ -1.52
VPS72YDR485C GAT2P40209 560 aa5.58□□□□□ -1.52
VPS72YDR485C LAS21P40367 830 aa5.58□□□□□ -1.52
VPS72YDR485C TFG2P41896 400 aaPredicted RBP5.58□□□□□ -1.52
VPS72YDR485C SPG5P42933 373 aa5.58□□□□□ -1.52
VPS72YDR485C PYK2P52489 506 aaKnown RBP5.58□□□□□ -1.52
VPS72YDR485C COG2P53271 262 aa5.58□□□□□ -1.52
VPS72YDR485C EMI2Q04409 500 aaKnown RBP5.58□□□□□ -1.52
VPS72YDR485C SSQ1Q05931 657 aaPredicted RBP5.58□□□□□ -1.52
VPS72YDR485C ECM30Q06673 1274 aa5.58□□□□□ -1.52
VPS72YDR485C MED4Q12343 284 aa5.58□□□□□ -1.52
VPS72YDR485C AHC1Q12433 566 aa5.58□□□□□ -1.52
VPS72YDR485C SPO24Q3E752 67 aa5.58□□□□□ -1.52
VPS72YDR485C DAL2P25335 343 aa5.58□□□□□ -1.52
VPS72YDR485C EFM2P38347 419 aa5.58□□□□□ -1.52
VPS72YDR485C DBP8P38719 431 aa5.58□□□□□ -1.52
VPS72YDR485C YIR014WP40570 242 aa5.58□□□□□ -1.52
VPS72YDR485C OTU1P43558 301 aa5.58□□□□□ -1.52
VPS72YDR485C YTP1P53584 459 aa5.58□□□□□ -1.52
VPS72YDR485C SHR3Q02774 210 aa5.58□□□□□ -1.52
VPS72YDR485C RSN1Q03516 953 aa5.58□□□□□ -1.52
VPS72YDR485C ARO10Q06408 635 aa5.58□□□□□ -1.52
VPS72YDR485C SMC5Q08204 1093 aa5.58□□□□□ -1.52
VPS72YDR485C CYC7P00045 113 aa5.57□□□□□ -1.52
VPS72YDR485C PMA1P05030 918 aaKnown RBP5.57□□□□□ -1.52
VPS72YDR485C POL30P15873 258 aaKnown RBP5.57□□□□□ -1.52
VPS72YDR485C SPE2P21182 396 aa5.57□□□□□ -1.52
VPS72YDR485C RTT107P38850 1070 aa5.57□□□□□ -1.52
VPS72YDR485C SYG1P40528 902 aa5.57□□□□□ -1.52
VPS72YDR485C YPS6P40583 537 aa5.57□□□□□ -1.52
VPS72YDR485C SNG1P46950 547 aa5.57□□□□□ -1.52
VPS72YDR485C PHO86P46956 311 aa5.57□□□□□ -1.52
VPS72YDR485C YMR087WQ04299 284 aa5.57□□□□□ -1.52
VPS72YDR485C NSE1Q07913 336 aa5.57□□□□□ -1.52
VPS72YDR485C NRT1Q08485 598 aa5.57□□□□□ -1.52
VPS72YDR485C MAS1P10507 462 aa5.57□□□□□ -1.52
VPS72YDR485C PEP5P12868 1029 aa5.57□□□□□ -1.52
VPS72YDR485C PAD1P33751 242 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
VPS72YDR485C STV1P37296 890 aa5.57□□□□□ -1.52
VPS72YDR485C RRN10P38204 145 aa5.57□□□□□ -1.52
VPS72YDR485C OLA1P38219 394 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms