RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS23, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS23	YDR246W	GET4	Q12125	312 aa		4.92	□□□□□ -1.62
TRS23	YDR246W	TOM1	Q03280	3268 aa		4.92	□□□□□ -1.62
TRS23	YDR246W	YLR422W	Q06409	1932 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	ATP6	P00854	259 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	SEC53	P07283	254 aa	Known RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	SUI3	P09064	285 aa	Known RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	NMT1	P14743	455 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	AMD1	P15274	810 aa	Known RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	TYR1	P20049	452 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	CCA1	P21269	546 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	TRX2	P22803	104 aa	Known RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	YSP3	P25036	478 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	BUB2	P26448	306 aa	Predicted RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	VPH2	P32341	215 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	PAH1	P32567	862 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	PTM1	P32857	523 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
TRS23	YDR246W	FUI1	P38196	639 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	YBL029W	P38201	376 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	PAC2	P39937	518 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	ECM10	P39987	644 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	PSF2	P40359	213 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	OPT1	P40897	799 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	BNA3	P47039	444 aa	Known RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	RTT101	P47050	842 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	VMA10	P48836	114 aa	Known RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	IMA1	P53051	589 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	STR3	P53101	465 aa	Known RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	YGL108C	P53139	140 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	NOP19	P53317	196 aa	Predicted RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	TRM112	P53738	135 aa	Predicted RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	REG1	Q00816	1014 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	PET117	Q02771	107 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	FMP30	Q02883	468 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	PIR3	Q03180	325 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	TAF12	Q03761	539 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	RPN9	Q04062	393 aa	Known RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	ECM30	Q06673	1274 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	PGC1	Q08959	321 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	NUS1	Q12063	375 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	DBP10	Q12389	995 aa	Known RBP	4.91	□□□□□ -1.62
TRS23	YDR246W	YDR524C-B	Q3E6R4	66 aa		4.91	□□□□□ -1.62
TRS23	YDR246W	SNF4	P12904	322 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	CDC26	P14724	124 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	PHO3	P24031	467 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	CSM1	P25651	190 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	YCR099C	P25657	155 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
TRS23	YDR246W	CSE1	P33307	960 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	TOM20	P35180	183 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	ECM4	P36156	370 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	HMT1	P38074	348 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	YBR225W	P38321	900 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	SLX1	P38324	304 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	HAT2	P39984	401 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	SNL1	P40548	159 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	MRX6	P48564	524 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	BOL2	P53082	120 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	GPI1	P53306	609 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	IBD2	P53892	351 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	TRS23	Q03784	219 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	HLR1	Q04429	423 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	HSP31	Q04432	237 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	YDR109C	Q04585	715 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	COQ11	Q05892	277 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	GGA1	Q06336	557 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	ATG17	Q06410	417 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	LDB18	Q07887	179 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	NSE1	Q07913	336 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	LEA1	Q08963	238 aa	Predicted RBP	4.9	□□□□□ -1.63
TRS23	YDR246W	SLF1	Q12034	447 aa	Known RBP	4.9	□□□□□ -1.63
TRS23	YDR246W	YOR342C	Q12182	319 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	ATG34	Q12292	412 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	YNL162W-A	Q3E7A8	72 aa		4.9	□□□□□ -1.63
TRS23	YDR246W	SUC2	P00724	532 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	TPK2	P06245	380 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	MSS18	P08593	268 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	AAT2	P23542	418 aa	Known RBP	4.89	□□□□□ -1.63
TRS23	YDR246W	DBR1	P24309	405 aa	Known RBP	4.89	□□□□□ -1.63
TRS23	YDR246W	ADK2	P26364	225 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	ATP7	P30902	174 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	UGP1	P32861	499 aa	Known RBP	4.89	□□□□□ -1.63
TRS23	YDR246W	TIF3	P34167	436 aa	Known RBP	4.89	□□□□□ -1.63
TRS23	YDR246W	ECM13	P38195	257 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	IST2	P38250	946 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	STB5	P38699	743 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	YHL041W	P38730	149 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	UTP9	P38882	575 aa	Known RBP	4.89	□□□□□ -1.63
TRS23	YDR246W	YEN1	P40028	759 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	UBP7	P40453	1071 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	IST3	P40565	148 aa	Predicted RBP	4.89	□□□□□ -1.63
TRS23	YDR246W	GTR2	P53290	341 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	COP1	P53622	1201 aa	Known RBP	4.89	□□□□□ -1.63
TRS23	YDR246W	YNL033W	P53964	284 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	EFM6	P53970	246 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	YNL019C	P53975	284 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	SPP2	Q02521	185 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	GOT1	Q03554	138 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	HER2	Q03557	464 aa		4.89	□□□□□ -1.63
TRS23	YDR246W	BLS1	Q06071	122 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 65 ms