RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE4	YDL231C	VIK1	Q12045	647 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	FUM1	P08417	488 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	TYR1	P20049	452 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	URA4	P20051	364 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	THI80	P35202	319 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	BOL3	P39724	118 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	EMP65	P40085	556 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	COG3	P40094	801 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	GAT1	P43574	510 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	NUP85	P46673	744 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	EMC2	P47133	292 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	STE24	P47154	453 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	TPS1	Q00764	495 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	PDR8	Q06149	701 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	NDL1	Q06568	189 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	RSA1	Q08932	381 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	YCL012C	Q8J0M4	134 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	RHO1	P06780	209 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	RDS2	P19541	446 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	MSB1	P21339	1137 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	SSH4	P32343	579 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	STE14	P32584	239 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	MGM101	P32787	269 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	NUF2	P33895	451 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	ZTA1	P38230	334 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	TIF11	P38912	153 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	CEM1	P39525	442 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	SWP82	P43554	623 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	YJR149W	P47177	404 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	SYF2	P53277	215 aa	Predicted RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	COG5	P53951	403 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	HMO1	Q03973	246 aa	Known RBP	4.04	□□□□□ -1.76
BRE4	YDL231C	MCD1	Q12158	566 aa		4.04	□□□□□ -1.76
BRE4	YDL231C	HOP1	P20050	605 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	CSM1	P25651	190 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	ZUO1	P32527	433 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	PEP7	P32609	515 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	HBS1	P32769	611 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	SRP101	P32916	621 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	CAF4	P36130	643 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	TRM7	P38238	310 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	SBE22	P38814	852 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	YAR028W	P39548	234 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	OSW5	P40219	148 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	APQ12	P40532	138 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	MET28	P40573	187 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	MUP1	P50276	574 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	RMR1	P53060	241 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	MDM34	P53083	459 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	SLT2	Q00772	484 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	DBP9	Q06218	594 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	ARR1	Q06596	294 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	CLP1	Q08685	445 aa	Predicted RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	GUP2	Q08929	609 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	MHT1	Q12525	324 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	Q0010	Q9ZZX9	128 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	HTS1	P07263	546 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	FBA1	P14540	359 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	CBS2	P14905	389 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	MER1	P16523	270 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	CNA1	P23287	553 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	CTR86	P25355	563 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	SEC66	P33754	206 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	SEA4	P38164	1038 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	RRN10	P38204	145 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	YHB1	P39676	399 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	EFM3	P47163	339 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	YGR015C	P53208	328 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	YNL095C	P53932	642 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	NIS1	P53939	407 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	TMA20	P89886	181 aa	Predicted RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	CIK1	Q01649	594 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	JLP1	Q12358	412 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	MDM12	Q92328	271 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	PNO1	Q99216	274 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	HAP4	P14064	554 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	OCA4	P25366	362 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	PUP2	P32379	260 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	ROT2	P38138	954 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	RCK1	P38622	512 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	LYS1	P38998	373 aa	RIP-Chip data	4.03	□□□□□ -1.76	not detected
BRE4	YDL231C	PZF1	P39933	429 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	FMP52	P40008	231 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	SOK1	P40317	901 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	LYS12	P40495	371 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	AIM22	P47051	409 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	BIR1	P47134	954 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	IMA1	P53051	589 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	MMT1	Q03218	510 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	SNX3	Q08826	162 aa	Known RBP	4.03	□□□□□ -1.76
BRE4	YDL231C	YOR012W	Q12351	137 aa		4.03	□□□□□ -1.76
BRE4	YDL231C	RPL24B	P24000	155 aa	Known RBP	4.02	□□□□□ -1.77
BRE4	YDL231C	PBN1	P25580	416 aa		4.02	□□□□□ -1.77
BRE4	YDL231C	DAL80	P26343	269 aa		4.02	□□□□□ -1.77
BRE4	YDL231C	BIG1	P38813	335 aa		4.02	□□□□□ -1.77
BRE4	YDL231C	RGA1	P39083	1007 aa		4.02	□□□□□ -1.77
BRE4	YDL231C	RSP5	P39940	809 aa	Known RBP	4.02	□□□□□ -1.77
BRE4	YDL231C	LTP1	P40347	161 aa		4.02	□□□□□ -1.77
BRE4	YDL231C	SNL1	P40548	159 aa		4.02	□□□□□ -1.77
BRE4	YDL231C	MSS2	P40990	351 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms