RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W RCY1P39531 840 aa1.34□□□□□ -2.19
CDC36YDL165W YHB1P39676 399 aaKnown RBP1.34□□□□□ -2.19
CDC36YDL165W CSM2P40465 213 aa1.34□□□□□ -2.19
CDC36YDL165W PKP1P40530 394 aa1.34□□□□□ -2.19
CDC36YDL165W SNZ3P43545 298 aa1.34□□□□□ -2.19
CDC36YDL165W URB2P47108 1174 aa1.34□□□□□ -2.19
CDC36YDL165W VMA10P48836 114 aaKnown RBP1.34□□□□□ -2.19
CDC36YDL165W YGR266WP53326 701 aa1.34□□□□□ -2.19
CDC36YDL165W RET3P53600 189 aa1.34□□□□□ -2.19
CDC36YDL165W SNZ2P53824 298 aa1.34□□□□□ -2.19
CDC36YDL165W CSL4P53859 292 aaPredicted RBP1.34□□□□□ -2.19
CDC36YDL165W INN1P53901 409 aa1.34□□□□□ -2.19
CDC36YDL165W EGD1Q02642 157 aaKnown RBP1.34□□□□□ -2.19
CDC36YDL165W DML1Q03652 475 aa1.34□□□□□ -2.19
CDC36YDL165W RVB1Q03940 463 aaKnown RBP1.34□□□□□ -2.19
CDC36YDL165W YMR027WQ04371 470 aa1.34□□□□□ -2.19
CDC36YDL165W MGR3Q04472 501 aa1.34□□□□□ -2.19
CDC36YDL165W IVY1Q04934 453 aa1.34□□□□□ -2.19
CDC36YDL165W DYN3Q04949 312 aa1.34□□□□□ -2.19
CDC36YDL165W DON1Q05610 365 aa1.34□□□□□ -2.19
CDC36YDL165W SYO1Q07395 620 aa1.34□□□□□ -2.19
CDC36YDL165W YDL144CQ07589 356 aa1.34□□□□□ -2.19
CDC36YDL165W CMS1Q07897 291 aaKnown RBP1.34□□□□□ -2.19
CDC36YDL165W ABP140Q08641 628 aaKnown RBP1.34□□□□□ -2.19
CDC36YDL165W YPL225WQ08971 146 aaKnown RBP1.34□□□□□ -2.19
CDC36YDL165W MED2Q12124 431 aa1.34□□□□□ -2.19
CDC36YDL165W ATP16Q12165 160 aa1.34□□□□□ -2.19
CDC36YDL165W BUG1Q12191 341 aa1.34□□□□□ -2.19
CDC36YDL165W SCM3Q12334 223 aa1.34□□□□□ -2.19
CDC36YDL165W VCX1Q99385 411 aa1.34□□□□□ -2.19
CDC36YDL165W SPP41P38904 1435 aa1.33□□□□□ -2.2
CDC36YDL165W ECM5Q03214 1411 aa1.33□□□□□ -2.2
CDC36YDL165W STF1P01098 86 aa1.33□□□□□ -2.2
CDC36YDL165W PAB1P04147 577 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2 RIP-Chip
CDC36YDL165W RPP0P05317 312 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W HIS3P06633 220 aa1.33□□□□□ -2.2
CDC36YDL165W RPC40P07703 335 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W GCD2P12754 651 aaPredicted RBP1.33□□□□□ -2.2
CDC36YDL165W TAL1P15019 335 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W VMA2P16140 517 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W GLK1P17709 500 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W REC107P21651 314 aa1.33□□□□□ -2.2
CDC36YDL165W LCB1P25045 558 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W RDS1P25611 832 aa1.33□□□□□ -2.2
CDC36YDL165W YCR016WP25617 290 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W HSP30P25619 332 aa1.33□□□□□ -2.2
CDC36YDL165W KRE2P27809 442 aa1.33□□□□□ -2.2
CDC36YDL165W RPC19P28000 142 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W CRM1P30822 1084 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W SRB4P32569 687 aa1.33□□□□□ -2.2
CDC36YDL165W SSE1P32589 693 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W RIB7P33312 244 aa1.33□□□□□ -2.2
CDC36YDL165W UTP11P34247 250 aaPredicted RBP1.33□□□□□ -2.2
CDC36YDL165W HEL1P36113 551 aa1.33□□□□□ -2.2
CDC36YDL165W NOP4P37838 685 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W MAK5P38112 773 aaPredicted RBP1.33□□□□□ -2.2
CDC36YDL165W LAG1P38703 411 aa1.33□□□□□ -2.2
CDC36YDL165W STP2P38704 541 aa1.33□□□□□ -2.2
CDC36YDL165W VMA22P38784 181 aa1.33□□□□□ -2.2
CDC36YDL165W LIN1P38852 340 aaPredicted RBP1.33□□□□□ -2.2
CDC36YDL165W STN1P38960 494 aa1.33□□□□□ -2.2
CDC36YDL165W SSO2P39926 295 aa1.33□□□□□ -2.2
CDC36YDL165W ALD5P40047 520 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W VID27P40157 782 aa1.33□□□□□ -2.2
CDC36YDL165W JLP2P40206 208 aa1.33□□□□□ -2.2
CDC36YDL165W RSM25P40496 264 aa1.33□□□□□ -2.2
CDC36YDL165W SEC28P40509 296 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W SPO22P40511 975 aa1.33□□□□□ -2.2
CDC36YDL165W YIL001WP40560 513 aa1.33□□□□□ -2.2
CDC36YDL165W INA22P40576 216 aa1.33□□□□□ -2.2
CDC36YDL165W REE1P40893 198 aa1.33□□□□□ -2.2
CDC36YDL165W GCD14P46959 383 aaPredicted RBP1.33□□□□□ -2.2
CDC36YDL165W HAM1P47119 197 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W SSN8P47821 323 aa1.33□□□□□ -2.2
CDC36YDL165W RBL2P48606 106 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W MNP1P53163 194 aaPredicted RBP1.33□□□□□ -2.2
CDC36YDL165W CGR1P53188 120 aa1.33□□□□□ -2.2
CDC36YDL165W YGR067CP53243 804 aa1.33□□□□□ -2.2
CDC36YDL165W CAF130P53280 1122 aaPredicted RBP1.33□□□□□ -2.2
CDC36YDL165W MEP3P53390 489 aa1.33□□□□□ -2.2
CDC36YDL165W MRPL50P53724 139 aa1.33□□□□□ -2.2
CDC36YDL165W CBK1P53894 756 aa1.33□□□□□ -2.2
CDC36YDL165W ALF1P53904 254 aa1.33□□□□□ -2.2
CDC36YDL165W SLT2Q00772 484 aa1.33□□□□□ -2.2
CDC36YDL165W CIK1Q01649 594 aa1.33□□□□□ -2.2
CDC36YDL165W YVH1Q02256 364 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W YPL014WQ02606 381 aa1.33□□□□□ -2.2
CDC36YDL165W ERO1Q03103 563 aa1.33□□□□□ -2.2
CDC36YDL165W FIN1Q03898 291 aa1.33□□□□□ -2.2
CDC36YDL165W SYF1Q04048 859 aaPredicted RBP1.33□□□□□ -2.2
CDC36YDL165W RAD30Q04049 632 aa1.33□□□□□ -2.2
CDC36YDL165W TAF11Q04226 346 aa1.33□□□□□ -2.2
CDC36YDL165W RPC11Q04307 110 aaPredicted RBP1.33□□□□□ -2.2
CDC36YDL165W RBS1Q05672 457 aaKnown RBP1.33□□□□□ -2.2
CDC36YDL165W YLR287CQ05881 355 aa1.33□□□□□ -2.2
CDC36YDL165W DCS1Q06151 350 aa1.33□□□□□ -2.2
CDC36YDL165W SEC10Q06245 871 aa1.33□□□□□ -2.2
CDC36YDL165W YLR031WQ07978 186 aa1.33□□□□□ -2.2
CDC36YDL165W PGC1Q08959 321 aa1.33□□□□□ -2.2
CDC36YDL165W ATG9Q12142 997 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms