RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 Dnajc7Q9QYI3 494 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Kmt2eQ3UG20 1868 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Has3O08650 554 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Barx2O08686 283 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Tpm1P58771 284 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Hmgb1P63158 215 aaKnown RBP16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Trim43cP86449 446 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Lamb3Q61087 1168 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Sp4Q62445 782 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Frmd3Q8BHD4 595 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Ccdc14Q8K2J4 934 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Cacnb1Q8R3Z5 597 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Nr3c2Q8VII8 978 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Coa7Q921H9 231 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Haus2Q9CQS9 234 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Extl2Q9ES89 330 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Usp21Q9QZL6 566 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 BcamQ9R069 622 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 SisF8VQM5 1818 aa16.57■□□□□ 0.24
Trim11-203ENSMUST00000108810 Sec14l1A8Y5H7 715 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Krt36B1AQ75 473 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Nom1Q3UFM5 854 aaKnown RBP16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Meis1Q60954 390 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Kif5bQ61768 963 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 CnstQ8CBC4 711 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Atp5c1Q91VR2 298 aaKnown RBP16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Kdm4bQ91VY5 1086 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 PccaQ91ZA3 724 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Scn10aQ6QIY3 1958 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Pagr1bF6V0H0 108 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 AurkbO70126 345 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Pip4k2aO70172 405 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Irf6P97431 467 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Dph1Q5NCQ5 438 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Phf20Q8BLG0 1010 aaKnown RBP16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Rfc4Q99J62 364 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Pagr1aQ99L02 253 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 CsadQ9DBE0 493 aa16.56■□□□□ 0.24
Trim11-203ENSMUST00000108810 Fyb2A2A995 729 aa16.55■□□□□ 0.24
Trim11-203ENSMUST00000108810 Apol10bG3X9K7 334 aa16.55■□□□□ 0.24
Trim11-203ENSMUST00000108810 NyxP83503 476 aa16.55■□□□□ 0.24
Trim11-203ENSMUST00000108810 Sapcd2Q9D818 391 aa16.55■□□□□ 0.24
Trim11-203ENSMUST00000108810 Vmn2r79E9Q067 851 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 MsnP26041 577 aaKnown RBP16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Akr1b1P45376 316 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Epb41l4aP52963 686 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Rnf216P58283 853 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Zfp781Q0P5U5 243 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Ppp2r5cQ60996 524 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Krt14Q61781 484 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 NkrfQ8BY02 690 aaKnown RBP16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Grin3bQ91ZU9 1003 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Tmem192Q9CXT7 266 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Tbx18Q9EPZ6 613 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Ercc4Q9QZD4 917 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Tex21Q9R0U9 575 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 IkbkbO88351 757 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Chp1P61022 195 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 NfibP97863 570 aaKnown RBP16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Rasip1Q3U0S6 961 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Krt74Q6IFZ9 495 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 BcrQ6PAJ1 1270 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Zfp397Q7TNK4 527 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 C8aQ8K182 587 aa16.54■□□□□ 0.24
Trim11-203ENSMUST00000108810 Cnbd1B1AWM0 430 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Arhgap6O54834 987 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Nlrx1Q3TL44 975 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Tom1l2Q5SRX1 507 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Mapk4Q6P5G0 583 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Epn1Q80VP1 575 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Cc2d1bQ8BRN9 848 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Ascc2Q91WR3 749 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Ears2Q9CXJ1 523 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Smchd1Q6P5D8 2007 aaKnown RBP16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Trappc11B2RXC1 1133 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 NefhP19246 1090 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Herc4Q6PAV2 1057 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Rhbdf1Q6PIX5 856 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Ankrd24Q80VM7 985 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Ttc26Q8BS45 554 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Csgalnact2Q8C1F4 542 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Tbc1d10cQ8C9V1 444 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 Appl2Q8K3G9 662 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 PdhbQ9D051 359 aa16.53■□□□□ 0.24
Trim11-203ENSMUST00000108810 NpcdF8VQB8 469 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 ArP19091 899 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Rad23aP54726 363 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Mmp20P57748 482 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Pbxip1Q3TVI8 727 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Pls1Q3V0K9 630 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Rsad1Q5SUV1 442 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Garem2Q6PAJ3 880 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Armcx3Q8BHS6 379 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Ndst4Q9EQW8 872 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Phtf1Q9QZ09 761 aa16.52■□□□□ 0.24
Trim11-203ENSMUST00000108810 Parp2O88554 559 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 RaraP11416 462 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Lig1P37913 916 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Abcd1P48410 736 aa16.52■□□□□ 0.23
Trim11-203ENSMUST00000108810 Pdrg1P59048 133 aa16.52■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms