RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeastyeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX1YPR065W FUN19P28003 413 aaPredicted RBP2.19□□□□□ -2.06
ROX1YPR065W SIP2P34164 415 aaKnown RBP2.19□□□□□ -2.06
ROX1YPR065W STB6P36085 766 aa2.19□□□□□ -2.06
ROX1YPR065W YBP1P38315 674 aa2.19□□□□□ -2.06
ROX1YPR065W VHC1P38329 1120 aa2.19□□□□□ -2.06
ROX1YPR065W LSM5P40089 93 aaKnown RBP2.19□□□□□ -2.06
ROX1YPR065W SYG1P40528 902 aa2.19□□□□□ -2.06
ROX1YPR065W YPI1P43587 155 aa2.19□□□□□ -2.06
ROX1YPR065W GUF1P46943 645 aa2.19□□□□□ -2.06
ROX1YPR065W YJL132WP47014 750 aa2.19□□□□□ -2.06
ROX1YPR065W YGL138CP53122 345 aa2.19□□□□□ -2.06
ROX1YPR065W DRN1P53255 507 aaKnown RBP2.19□□□□□ -2.06
ROX1YPR065W NCS2P53923 493 aaPredicted RBP2.19□□□□□ -2.06
ROX1YPR065W RLI1Q03195 608 aaKnown RBP2.19□□□□□ -2.06
ROX1YPR065W RMT2Q03305 412 aa2.19□□□□□ -2.06
ROX1YPR065W YMR087WQ04299 284 aa2.19□□□□□ -2.06
ROX1YPR065W RRP45Q05636 305 aaKnown RBP2.19□□□□□ -2.06
ROX1YPR065W RBS1Q05672 457 aaKnown RBP2.19□□□□□ -2.06
ROX1YPR065W VPS74Q06385 345 aa2.19□□□□□ -2.06
ROX1YPR065W SIL1Q08199 421 aa2.19□□□□□ -2.06
ROX1YPR065W CFT2Q12102 859 aaPredicted RBP2.19□□□□□ -2.06
ROX1YPR065W YDL009CQ12210 107 aa2.19□□□□□ -2.06
ROX1YPR065W AFI1Q99222 893 aa2.19□□□□□ -2.06
ROX1YPR065W SUC2P00724 532 aa2.18□□□□□ -2.06
ROX1YPR065W ATP10P18496 279 aa2.18□□□□□ -2.06
ROX1YPR065W RPC53P25441 422 aa2.18□□□□□ -2.06
ROX1YPR065W YIM1P28625 365 aa2.18□□□□□ -2.06
ROX1YPR065W ATP11P32453 318 aa2.18□□□□□ -2.06
ROX1YPR065W NDC1P32500 655 aa2.18□□□□□ -2.06
ROX1YPR065W APE3P37302 537 aaKnown RBP2.18□□□□□ -2.06
ROX1YPR065W SRP72P38688 640 aaKnown RBP2.18□□□□□ -2.06
ROX1YPR065W ISC1P40015 477 aaKnown RBP2.18□□□□□ -2.06
ROX1YPR065W SPG5P42933 373 aa2.18□□□□□ -2.06
ROX1YPR065W FMS1P50264 508 aa2.18□□□□□ -2.06
ROX1YPR065W ART5P53244 586 aaKnown RBP2.18□□□□□ -2.06
ROX1YPR065W DSL1P53847 754 aa2.18□□□□□ -2.06
ROX1YPR065W RPA49Q01080 415 aaPredicted RBP2.18□□□□□ -2.06
ROX1YPR065W KAP120Q02932 1032 aa2.18□□□□□ -2.06
ROX1YPR065W ARX1Q03862 593 aaKnown RBP2.18□□□□□ -2.06
ROX1YPR065W ERB1Q04660 807 aaKnown RBP2.18□□□□□ -2.06
ROX1YPR065W SOV1Q04748 898 aa2.18□□□□□ -2.06
ROX1YPR065W SYO1Q07395 620 aa2.18□□□□□ -2.06
ROX1YPR065W YLL056CQ12177 298 aa2.18□□□□□ -2.06
ROX1YPR065W SMC6Q12749 1114 aa2.18□□□□□ -2.06
ROX1YPR065W GPH1P06738 902 aaKnown RBP2.17□□□□□ -2.06
ROX1YPR065W GDH1P07262 454 aaKnown RBP2.17□□□□□ -2.06
ROX1YPR065W YAR066WP0CX18 203 aa2.17□□□□□ -2.06
ROX1YPR065W YHR214WP0CX19 203 aa2.17□□□□□ -2.06
ROX1YPR065W RPI1P23250 407 aaKnown RBP2.17□□□□□ -2.06
ROX1YPR065W GYP6P32806 458 aa2.17□□□□□ -2.06
ROX1YPR065W YME2P32843 850 aa2.17□□□□□ -2.06
ROX1YPR065W FRE2P36033 711 aa2.17□□□□□ -2.06
ROX1YPR065W THI2P38141 450 aa2.17□□□□□ -2.06
ROX1YPR065W MMS4P38257 691 aa2.17□□□□□ -2.06
ROX1YPR065W YIF1P53845 314 aaKnown RBP2.17□□□□□ -2.06
ROX1YPR065W SLG1P54867 378 aa2.17□□□□□ -2.06
ROX1YPR065W ROY1Q04847 553 aa2.17□□□□□ -2.06
ROX1YPR065W DON1Q05610 365 aa2.17□□□□□ -2.06
ROX1YPR065W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
ROX1YPR065W HSP42Q12329 375 aa2.17□□□□□ -2.06
ROX1YPR065W ERP4Q12450 207 aa2.17□□□□□ -2.06
ROX1YPR065W SET6Q12529 373 aa2.17□□□□□ -2.06
ROX1YPR065W RPL20AP0CX23 172 aaKnown RBP2.16□□□□□ -2.06
ROX1YPR065W RPL20BP0CX24 172 aaPredicted RBP2.16□□□□□ -2.06
ROX1YPR065W MRS3P10566 314 aa2.16□□□□□ -2.06
ROX1YPR065W CLB1P24868 471 aa2.16□□□□□ -2.06
ROX1YPR065W ADK2P26364 225 aa2.16□□□□□ -2.06
ROX1YPR065W BUB3P26449 341 aa2.16□□□□□ -2.06
ROX1YPR065W APE2P32454 952 aaKnown RBP2.16□□□□□ -2.06
ROX1YPR065W VMA8P32610 256 aaKnown RBP2.16□□□□□ -2.06
ROX1YPR065W RML2P32611 393 aa2.16□□□□□ -2.06
ROX1YPR065W LOS1P33418 1100 aaPredicted RBP2.16□□□□□ -2.06
ROX1YPR065W NIP100P33420 868 aa2.16□□□□□ -2.06
ROX1YPR065W KEL1P38853 1164 aaKnown RBP2.16□□□□□ -2.06
ROX1YPR065W SHO1P40073 367 aa2.16□□□□□ -2.06
ROX1YPR065W FAU1P40099 211 aa2.16□□□□□ -2.06
ROX1YPR065W ZIM17P42844 174 aa2.16□□□□□ -2.06
ROX1YPR065W RTT101P47050 842 aa2.16□□□□□ -2.06
ROX1YPR065W YDL186WP48568 277 aa2.16□□□□□ -2.06
ROX1YPR065W YGR250CP53316 781 aaKnown RBP2.16□□□□□ -2.06
ROX1YPR065W BNI5P53890 448 aaKnown RBP2.16□□□□□ -2.06
ROX1YPR065W YDR387CQ04162 555 aa2.16□□□□□ -2.06
ROX1YPR065W TAP42Q04372 366 aa2.16□□□□□ -2.06
ROX1YPR065W HSP31Q04432 237 aa2.16□□□□□ -2.06
ROX1YPR065W AIM32Q04689 311 aa2.16□□□□□ -2.06
ROX1YPR065W HCR1Q05775 265 aaKnown RBP2.16□□□□□ -2.06
ROX1YPR065W BNA5Q05979 453 aa2.16□□□□□ -2.06
ROX1YPR065W RKM5Q12367 367 aa2.16□□□□□ -2.06
ROX1YPR065W YLR278CQ05854 1341 aa2.16□□□□□ -2.06
ROX1YPR065W AMD1P15274 810 aaKnown RBP2.15□□□□□ -2.07
ROX1YPR065W URA4P20051 364 aa2.15□□□□□ -2.07
ROX1YPR065W MTC4P38335 694 aaKnown RBP2.15□□□□□ -2.07
ROX1YPR065W YHR054CP38780 354 aa2.15□□□□□ -2.07
ROX1YPR065W ALG8P40351 577 aa2.15□□□□□ -2.07
ROX1YPR065W YJL213WP40896 331 aa2.15□□□□□ -2.07
ROX1YPR065W YFR016CP43597 1233 aaKnown RBP2.15□□□□□ -2.07
ROX1YPR065W RPS0BP46654 252 aaKnown RBP2.15□□□□□ -2.07
ROX1YPR065W GWT1P47026 490 aa2.15□□□□□ -2.07
ROX1YPR065W COS5P47187 383 aa2.15□□□□□ -2.07
ROX1YPR065W PCP1P53259 346 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms