RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	TRS85	P46944	698 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	YGR066C	P53242	292 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	YIF1	P53845	314 aa	Known RBP	0.85	□□□□□ -2.27
SEC8	YPR055W	SLG1	P54867	378 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	ADD37	Q03233	198 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	YDR387C	Q04162	555 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	YOL159C-A	Q3E769	90 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	YLR278C	Q05854	1341 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	HIP1	P06775	603 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	YIM1	P28625	365 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	SAS3	P34218	831 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	MRPL4	P36517	319 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	TIS11	P47977	285 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	YGR149W	P48236	432 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	PHB2	P50085	310 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	ELP3	Q02908	557 aa	Known RBP	0.85	□□□□□ -2.27
SEC8	YPR055W	HEL2	Q05580	639 aa	Known RBP	0.85	□□□□□ -2.27
SEC8	YPR055W	PBA1	Q05778	276 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	TSR1	Q07381	788 aa	Known RBP	0.85	□□□□□ -2.27
SEC8	YPR055W	YPR022C	Q12139	1133 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	IRC20	Q06554	1556 aa		0.85	□□□□□ -2.27
SEC8	YPR055W	ADH2	P00331	348 aa	Known RBP	0.84	□□□□□ -2.27
SEC8	YPR055W	LEU4	P06208	619 aa	Known RBP	0.84	□□□□□ -2.27
SEC8	YPR055W	PMR1	P13586	950 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	EXO70	P19658	623 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	SLY1	P22213	666 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	ITR1	P30605	584 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	MRE11	P32829	692 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	YBL059W	P34224	193 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	YJL132W	P47014	750 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	YPL199C	Q08954	240 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	RIM20	Q12033	661 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	ATG29	Q12092	213 aa		0.84	□□□□□ -2.27
SEC8	YPR055W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.28	not detected
SEC8	YPR055W	YAR066W	P0CX18	203 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	YHR214W	P0CX19	203 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	RPS8A	P0CX39	200 aa	Known RBP	0.84	□□□□□ -2.28
SEC8	YPR055W	RPS8B	P0CX40	200 aa	Known RBP	0.84	□□□□□ -2.28
SEC8	YPR055W	HEM15	P16622	393 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	LDB16	P25587	256 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	PIM1	P36775	1133 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	MUM2	P38236	366 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	DED81	P38707	554 aa	Known RBP	0.84	□□□□□ -2.28
SEC8	YPR055W	MET28	P40573	187 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	CAF40	P53829	373 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	TOF1	P53840	1238 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	FIN1	Q03898	291 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	TAP42	Q04372	366 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	SMA2	Q04658	369 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	AHC1	Q12433	566 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	HSC82	P15108	705 aa	Known RBP	0.84	□□□□□ -2.28
SEC8	YPR055W	RPI1	P23250	407 aa	Known RBP	0.84	□□□□□ -2.28
SEC8	YPR055W	HXT3	P32466	567 aa	Known RBP	0.84	□□□□□ -2.28
SEC8	YPR055W	YEL045C	P32616	141 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	CMC1	P36064	111 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	CBP4	P37267	147 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	VMA13	P41807	478 aa	Known RBP	0.84	□□□□□ -2.28
SEC8	YPR055W	HXT14	P42833	540 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	TWF1	P53250	332 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	MED1	Q12321	566 aa		0.84	□□□□□ -2.28
SEC8	YPR055W	OCA4	P25366	362 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	APE2	P32454	952 aa	Known RBP	0.83	□□□□□ -2.28
SEC8	YPR055W	NOP4	P37838	685 aa	Known RBP	0.83	□□□□□ -2.28
SEC8	YPR055W	YBR137W	P38276	179 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	PRE5	P40302	234 aa	Known RBP	0.83	□□□□□ -2.28
SEC8	YPR055W	MET18	P40469	1032 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	GPD2	P41911	440 aa	Known RBP	0.83	□□□□□ -2.28
SEC8	YPR055W	LAM5	P43560	674 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	YIP1	P53039	248 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	FRE4	P53746	719 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	MRPL19	P53875	158 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	HXT11	P54862	567 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	IMH1	Q06704	911 aa	Known RBP	0.83	□□□□□ -2.28
SEC8	YPR055W	SWR1	Q05471	1514 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	NIP100	P33420	868 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	MRPL10	P36520	322 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	RIB5	P38145	238 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	VID24	P38263	362 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	PTH1	P38876	190 aa	Known RBP	0.83	□□□□□ -2.28
SEC8	YPR055W	CCT2	P39076	527 aa	Known RBP	0.83	□□□□□ -2.28
SEC8	YPR055W	ESA1	Q08649	445 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	ERV2	Q12284	196 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	HRT3	Q12347	344 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	SEC39	Q12745	709 aa		0.83	□□□□□ -2.28
SEC8	YPR055W	TRP1	P00912	224 aa		0.82	□□□□□ -2.28
SEC8	YPR055W	ILV5	P06168	395 aa	Known RBP	0.82	□□□□□ -2.28
SEC8	YPR055W	SPT15	P13393	240 aa	Known RBP	0.82	□□□□□ -2.28
SEC8	YPR055W	MFT1	P33441	392 aa	Known RBP	0.82	□□□□□ -2.28
SEC8	YPR055W	YBP1	P38315	674 aa		0.82	□□□□□ -2.28
SEC8	YPR055W	SMF1	P38925	575 aa		0.82	□□□□□ -2.28
SEC8	YPR055W	PRM5	P40476	318 aa		0.82	□□□□□ -2.28
SEC8	YPR055W	ODC1	Q03028	310 aa		0.82	□□□□□ -2.28
SEC8	YPR055W	SYF1	Q04048	859 aa	Predicted RBP	0.82	□□□□□ -2.28
SEC8	YPR055W	PPM1	Q04081	328 aa		0.82	□□□□□ -2.28
SEC8	YPR055W	RRG7	Q08774	242 aa	Predicted RBP	0.82	□□□□□ -2.28
SEC8	YPR055W	SNX3	Q08826	162 aa	Known RBP	0.82	□□□□□ -2.28
SEC8	YPR055W	YLR108C	Q12259	485 aa		0.82	□□□□□ -2.28
SEC8	YPR055W	LPD1	P09624	499 aa	Known RBP	0.82	□□□□□ -2.28
SEC8	YPR055W	ROX1	P25042	368 aa		0.82	□□□□□ -2.28
SEC8	YPR055W	RAD14	P28519	371 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms