RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W IRC15Q02733 499 aa2.54□□□□□ -2
SNF12YNR023W RPM2Q02773 1202 aa2.54□□□□□ -2
SNF12YNR023W YMR087WQ04299 284 aa2.54□□□□□ -2
SNF12YNR023W NRT1Q08485 598 aa2.54□□□□□ -2
SNF12YNR023W ISN1Q99312 450 aa2.54□□□□□ -2
SNF12YNR023W RIP1P08067 215 aa2.54□□□□□ -2
SNF12YNR023W SRV2P17555 526 aaKnown RBP2.54□□□□□ -2
SNF12YNR023W CPR2P23285 205 aa2.54□□□□□ -2
SNF12YNR023W FRE1P32791 686 aa2.54□□□□□ -2
SNF12YNR023W THI2P38141 450 aa2.54□□□□□ -2
SNF12YNR023W RTT107P38850 1070 aa2.54□□□□□ -2
SNF12YNR023W VPS52P39904 641 aa2.54□□□□□ -2
SNF12YNR023W YJL070CP40361 888 aa2.54□□□□□ -2
SNF12YNR023W CAK1P43568 368 aaPredicted RBP2.54□□□□□ -2
SNF12YNR023W IKS1P47042 667 aa2.54□□□□□ -2
SNF12YNR023W CIK1Q01649 594 aa2.54□□□□□ -2
SNF12YNR023W HOT1Q03213 719 aa2.54□□□□□ -2
SNF12YNR023W YLR345WQ06137 509 aa2.54□□□□□ -2
SNF12YNR023W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SNF12YNR023W SIL1Q08199 421 aa2.54□□□□□ -2
SNF12YNR023W MED2Q12124 431 aa2.54□□□□□ -2
SNF12YNR023W MTF1P14908 341 aaKnown RBP2.53□□□□□ -2
SNF12YNR023W BUB3P26449 341 aa2.53□□□□□ -2
SNF12YNR023W SEC1P30619 724 aaKnown RBP2.53□□□□□ -2
SNF12YNR023W RSM22P36056 628 aa2.53□□□□□ -2
SNF12YNR023W APE3P37302 537 aaKnown RBP2.53□□□□□ -2
SNF12YNR023W KEL1P38853 1164 aaKnown RBP2.53□□□□□ -2
SNF12YNR023W DSL1P53847 754 aa2.53□□□□□ -2
SNF12YNR023W HCR1Q05775 265 aaKnown RBP2.53□□□□□ -2
SNF12YNR023W CYB2P00175 591 aa2.52□□□□□ -2.01
SNF12YNR023W HOM3P10869 527 aa2.52□□□□□ -2.01
SNF12YNR023W MDH1P17505 334 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SNF12YNR023W PPZ1P26570 692 aa2.52□□□□□ -2.01
SNF12YNR023W KRE2P27809 442 aa2.52□□□□□ -2.01
SNF12YNR023W PRP21P32524 280 aaPredicted RBP2.52□□□□□ -2.01
SNF12YNR023W PTR2P32901 601 aa2.52□□□□□ -2.01
SNF12YNR023W ZIM17P42844 174 aa2.52□□□□□ -2.01
SNF12YNR023W BUD27P43573 796 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SNF12YNR023W RSC1P53236 928 aa2.52□□□□□ -2.01
SNF12YNR023W ART5P53244 586 aaKnown RBP2.52□□□□□ -2.01
SNF12YNR023W RLI1Q03195 608 aaKnown RBP2.52□□□□□ -2.01
SNF12YNR023W SXM1Q04175 944 aaKnown RBP2.52□□□□□ -2.01
SNF12YNR023W HSP31Q04432 237 aa2.52□□□□□ -2.01
SNF12YNR023W ERP1Q05359 219 aaKnown RBP2.52□□□□□ -2.01
SNF12YNR023W VAM3Q12241 283 aa2.52□□□□□ -2.01
SNF12YNR023W RRD2Q12461 358 aa2.52□□□□□ -2.01
SNF12YNR023W CRM1P30822 1084 aaKnown RBP2.51□□□□□ -2.01
SNF12YNR023W SIN4P32259 974 aa2.51□□□□□ -2.01
SNF12YNR023W NDC1P32500 655 aa2.51□□□□□ -2.01
SNF12YNR023W MMS4P38257 691 aa2.51□□□□□ -2.01
SNF12YNR023W LRP1P38801 184 aaKnown RBP2.51□□□□□ -2.01
SNF12YNR023W CCT2P39076 527 aaKnown RBP2.51□□□□□ -2.01
SNF12YNR023W RPS0BP46654 252 aaKnown RBP2.51□□□□□ -2.01
SNF12YNR023W RTT101P47050 842 aa2.51□□□□□ -2.01
SNF12YNR023W PNG1Q02890 363 aa2.51□□□□□ -2.01
SNF12YNR023W YMR130WQ04223 302 aa2.51□□□□□ -2.01
SNF12YNR023W AIM32Q04689 311 aa2.51□□□□□ -2.01
SNF12YNR023W RKM1Q08961 583 aaPredicted RBP2.51□□□□□ -2.01
SNF12YNR023W DAP1Q12091 152 aa2.51□□□□□ -2.01
SNF12YNR023W RKM5Q12367 367 aa2.51□□□□□ -2.01
SNF12YNR023W HIS4P00815 799 aaKnown RBP2.51□□□□□ -2.01
SNF12YNR023W MRS3P10566 314 aa2.51□□□□□ -2.01
SNF12YNR023W URA4P20051 364 aa2.51□□□□□ -2.01
SNF12YNR023W CDC60P26637 1090 aaKnown RBP2.51□□□□□ -2.01
SNF12YNR023W BRF1P29056 596 aa2.51□□□□□ -2.01
SNF12YNR023W HIR2P32480 875 aa2.51□□□□□ -2.01
SNF12YNR023W RRT2P38332 387 aa2.51□□□□□ -2.01
SNF12YNR023W SHO1P40073 367 aa2.51□□□□□ -2.01
SNF12YNR023W GWT1P47026 490 aa2.51□□□□□ -2.01
SNF12YNR023W YJR011CP47086 261 aaPredicted RBP2.51□□□□□ -2.01
SNF12YNR023W TCB2P48231 1178 aa2.51□□□□□ -2.01
SNF12YNR023W RPT4P53549 437 aaKnown RBP2.51□□□□□ -2.01
SNF12YNR023W ACL4Q03771 387 aa2.51□□□□□ -2.01
SNF12YNR023W YLR278CQ05854 1341 aa2.5□□□□□ -2.01
SNF12YNR023W HIP1P06775 603 aa2.5□□□□□ -2.01
SNF12YNR023W YML002WP0CF17 737 aa2.5□□□□□ -2.01
SNF12YNR023W ATR1P13090 542 aa2.5□□□□□ -2.01
SNF12YNR023W SEC63P14906 663 aa2.5□□□□□ -2.01
SNF12YNR023W CLN1P20437 546 aa2.5□□□□□ -2.01
SNF12YNR023W ERV1P27882 189 aa2.5□□□□□ -2.01
SNF12YNR023W BEM1P29366 551 aa2.5□□□□□ -2.01
SNF12YNR023W SPC110P32380 944 aa2.5□□□□□ -2.01
SNF12YNR023W FRE2P36033 711 aa2.5□□□□□ -2.01
SNF12YNR023W SLM4P38247 162 aa2.5□□□□□ -2.01
SNF12YNR023W RFC3P38629 340 aa2.5□□□□□ -2.01
SNF12YNR023W YHR054CP38780 354 aa2.5□□□□□ -2.01
SNF12YNR023W HAT2P39984 401 aa2.5□□□□□ -2.01
SNF12YNR023W ISC1P40015 477 aaKnown RBP2.5□□□□□ -2.01
SNF12YNR023W ALG8P40351 577 aa2.5□□□□□ -2.01
SNF12YNR023W ECM27P47144 725 aa2.5□□□□□ -2.01
SNF12YNR023W CRZ1P53968 678 aa2.5□□□□□ -2.01
SNF12YNR023W YDR387CQ04162 555 aa2.5□□□□□ -2.01
SNF12YNR023W VPS54Q12071 889 aa2.5□□□□□ -2.01
SNF12YNR023W HSP82P02829 709 aaKnown RBP2.49□□□□□ -2.01
SNF12YNR023W SCEIP03882 235 aa2.49□□□□□ -2.01
SNF12YNR023W RPL15AP05748 204 aaKnown RBP2.49□□□□□ -2.01
SNF12YNR023W YAR066WP0CX18 203 aa2.49□□□□□ -2.01
SNF12YNR023W YHR214WP0CX19 203 aa2.49□□□□□ -2.01
SNF12YNR023W SPO7P18410 259 aa2.49□□□□□ -2.01
SNF12YNR023W GEX1P25596 615 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms