RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
VPS52YDR484W RKM5Q12367 367 aa2.18□□□□□ -2.06
VPS52YDR484W PMR1P13586 950 aa2.17□□□□□ -2.06
VPS52YDR484W RED1P14291 827 aa2.17□□□□□ -2.06
VPS52YDR484W CLC1P17891 233 aa2.17□□□□□ -2.06
VPS52YDR484W IDH2P28241 369 aaKnown RBP2.17□□□□□ -2.06
VPS52YDR484W JNM1P36224 373 aa2.17□□□□□ -2.06
VPS52YDR484W TIF5P38431 405 aaKnown RBP2.17□□□□□ -2.06
VPS52YDR484W ISC1P40015 477 aaKnown RBP2.17□□□□□ -2.06
VPS52YDR484W BOR1P53838 576 aa2.17□□□□□ -2.06
VPS52YDR484W PNG1Q02890 363 aa2.17□□□□□ -2.06
VPS52YDR484W TAF11Q04226 346 aa2.17□□□□□ -2.06
VPS52YDR484W HNT3Q08702 217 aa2.17□□□□□ -2.06
VPS52YDR484W SFI1Q12369 946 aa2.17□□□□□ -2.06
VPS52YDR484W YAR066WP0CX18 203 aa2.17□□□□□ -2.06
VPS52YDR484W YHR214WP0CX19 203 aa2.17□□□□□ -2.06
VPS52YDR484W CPR1P14832 162 aaKnown RBP2.17□□□□□ -2.06
VPS52YDR484W ATP10P18496 279 aa2.17□□□□□ -2.06
VPS52YDR484W MRP4P32902 394 aa2.17□□□□□ -2.06
VPS52YDR484W YMR147WP40218 223 aaKnown RBP2.17□□□□□ -2.06
VPS52YDR484W VTC2P43585 828 aa2.17□□□□□ -2.06
VPS52YDR484W WSC2P53832 503 aa2.17□□□□□ -2.06
VPS52YDR484W ODC1Q03028 310 aa2.17□□□□□ -2.06
VPS52YDR484W PIR3Q03180 325 aa2.17□□□□□ -2.06
VPS52YDR484W YLR287CQ05881 355 aa2.17□□□□□ -2.06
VPS52YDR484W YLL056CQ12177 298 aa2.17□□□□□ -2.06
VPS52YDR484W RTN2Q12443 393 aa2.17□□□□□ -2.06
VPS52YDR484W GPH1P06738 902 aaKnown RBP2.16□□□□□ -2.06
VPS52YDR484W CLB3P24870 427 aa2.16□□□□□ -2.06
VPS52YDR484W YCR100CP25606 316 aa2.16□□□□□ -2.06
VPS52YDR484W GLC7P32598 312 aaKnown RBP2.16□□□□□ -2.06
VPS52YDR484W THI2P38141 450 aa2.16□□□□□ -2.06
VPS52YDR484W KEL1P38853 1164 aaKnown RBP2.16□□□□□ -2.06
VPS52YDR484W YFL067WP43537 175 aa2.16□□□□□ -2.06
VPS52YDR484W YGL242CP53066 181 aa2.16□□□□□ -2.06
VPS52YDR484W MNP1P53163 194 aaPredicted RBP2.16□□□□□ -2.06
VPS52YDR484W DSL1P53847 754 aa2.16□□□□□ -2.06
VPS52YDR484W YCL021W-AQ96VH3 125 aa2.16□□□□□ -2.06
VPS52YDR484W HIP1P06775 603 aa2.15□□□□□ -2.06
VPS52YDR484W RPL3P14126 387 aaKnown RBP2.15□□□□□ -2.06
VPS52YDR484W RNA14P25298 677 aaKnown RBP2.15□□□□□ -2.06
VPS52YDR484W ERG3P32353 365 aa2.15□□□□□ -2.06
VPS52YDR484W NPL6P32832 435 aa2.15□□□□□ -2.06
VPS52YDR484W HCS1P34243 683 aa2.15□□□□□ -2.06
VPS52YDR484W AVT5P38176 459 aa2.15□□□□□ -2.06
VPS52YDR484W PCA1P38360 1216 aa2.15□□□□□ -2.06
VPS52YDR484W MKT1P40850 830 aaKnown RBP2.15□□□□□ -2.06
VPS52YDR484W GCD10P41814 478 aa2.15□□□□□ -2.06
VPS52YDR484W TFG2P41896 400 aaPredicted RBP2.15□□□□□ -2.06
VPS52YDR484W SSN8P47821 323 aa2.15□□□□□ -2.06
VPS52YDR484W FMS1P50264 508 aa2.15□□□□□ -2.06
VPS52YDR484W AVT4P50944 713 aa2.15□□□□□ -2.06
VPS52YDR484W POP6P53218 158 aa2.15□□□□□ -2.06
VPS52YDR484W SYF1Q04048 859 aaPredicted RBP2.15□□□□□ -2.06
VPS52YDR484W RRN11Q04712 507 aa2.15□□□□□ -2.06
VPS52YDR484W TLG2Q08144 397 aa2.15□□□□□ -2.06
VPS52YDR484W MUM3Q08750 479 aa2.15□□□□□ -2.06
VPS52YDR484W RSA1Q08932 381 aa2.15□□□□□ -2.06
VPS52YDR484W SCM3Q12334 223 aa2.15□□□□□ -2.06
VPS52YDR484W PPH22P23595 377 aa2.15□□□□□ -2.07
VPS52YDR484W HXT3P32466 567 aaKnown RBP2.15□□□□□ -2.07
VPS52YDR484W NIP100P33420 868 aa2.15□□□□□ -2.07
VPS52YDR484W YBR139WP38109 508 aa2.15□□□□□ -2.07
VPS52YDR484W VHC1P38329 1120 aa2.15□□□□□ -2.07
VPS52YDR484W VMA13P41807 478 aaKnown RBP2.15□□□□□ -2.07
VPS52YDR484W YPI1P43587 155 aa2.15□□□□□ -2.07
VPS52YDR484W DLD2P46681 530 aaKnown RBP2.15□□□□□ -2.07
VPS52YDR484W IBD2P53892 351 aa2.15□□□□□ -2.07
VPS52YDR484W HSP31Q04432 237 aa2.15□□□□□ -2.07
VPS52YDR484W PRP21P32524 280 aaPredicted RBP2.14□□□□□ -2.07
VPS52YDR484W NAT2P37293 288 aa2.14□□□□□ -2.07
VPS52YDR484W NOC2P39744 710 aaKnown RBP2.14□□□□□ -2.07
VPS52YDR484W ECM27P47144 725 aa2.14□□□□□ -2.07
VPS52YDR484W ARK1P53974 638 aa2.14□□□□□ -2.07
VPS52YDR484W MRP51Q02950 344 aa2.14□□□□□ -2.07
VPS52YDR484W YPL199CQ08954 240 aa2.14□□□□□ -2.07
VPS52YDR484W HSP42Q12329 375 aa2.14□□□□□ -2.07
VPS52YDR484W RRD2Q12461 358 aa2.14□□□□□ -2.07
VPS52YDR484W HIS4P00815 799 aaKnown RBP2.13□□□□□ -2.07
VPS52YDR484W HEM15P16622 393 aa2.13□□□□□ -2.07
VPS52YDR484W FUR1P18562 216 aaKnown RBP2.13□□□□□ -2.07
VPS52YDR484W REC107P21651 314 aa2.13□□□□□ -2.07
VPS52YDR484W YIM1P28625 365 aa2.13□□□□□ -2.07
VPS52YDR484W ECM25P32525 599 aa2.13□□□□□ -2.07
VPS52YDR484W NFU1P32860 256 aa2.13□□□□□ -2.07
VPS52YDR484W YCR041WP37265 110 aa2.13□□□□□ -2.07
VPS52YDR484W ARA1P38115 344 aa2.13□□□□□ -2.07
VPS52YDR484W CCT2P39076 527 aaKnown RBP2.13□□□□□ -2.07
VPS52YDR484W RRT5P43607 289 aa2.13□□□□□ -2.07
VPS52YDR484W TRS85P46944 698 aa2.13□□□□□ -2.07
VPS52YDR484W YIP1P53039 248 aa2.13□□□□□ -2.07
VPS52YDR484W ART5P53244 586 aaKnown RBP2.13□□□□□ -2.07
VPS52YDR484W PCP1P53259 346 aa2.13□□□□□ -2.07
VPS52YDR484W RPA49Q01080 415 aaPredicted RBP2.13□□□□□ -2.07
VPS52YDR484W SPC19Q03954 165 aa2.13□□□□□ -2.07
VPS52YDR484W YDR387CQ04162 555 aa2.13□□□□□ -2.07
VPS52YDR484W HEL2Q05580 639 aaKnown RBP2.13□□□□□ -2.07
VPS52YDR484W RRP45Q05636 305 aaKnown RBP2.13□□□□□ -2.07
VPS52YDR484W YLR278CQ05854 1341 aa2.13□□□□□ -2.07
VPS52YDR484W HHF1P02309 103 aaKnown RBP2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms