RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W PRP16P15938 1071 aaPredicted RBP2.65□□□□□ -1.98
SSF2YDR312W LOS1P33418 1100 aaPredicted RBP2.65□□□□□ -1.98
SSF2YDR312W SHP1P34223 423 aa2.65□□□□□ -1.98
SSF2YDR312W YNK1P36010 153 aaKnown RBP2.65□□□□□ -1.98
SSF2YDR312W TCM62P38228 572 aaKnown RBP2.65□□□□□ -1.98
SSF2YDR312W TIF4631P39935 952 aaKnown RBP2.65□□□□□ -1.98
SSF2YDR312W MET28P40573 187 aa2.65□□□□□ -1.98
SSF2YDR312W BNA5Q05979 453 aa2.65□□□□□ -1.98
SSF2YDR312W SYO1Q07395 620 aa2.65□□□□□ -1.98
SSF2YDR312W PPT2Q12036 173 aa2.65□□□□□ -1.98
SSF2YDR312W RPO41P13433 1351 aaKnown RBP2.65□□□□□ -1.99
SSF2YDR312W CYB2P00175 591 aa2.64□□□□□ -1.99
SSF2YDR312W DFR1P07807 211 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
SSF2YDR312W PRD1P25375 712 aa2.64□□□□□ -1.99
SSF2YDR312W YCR022CP25620 114 aa2.64□□□□□ -1.99
SSF2YDR312W CPR3P25719 182 aa2.64□□□□□ -1.99
SSF2YDR312W BUD14P27637 709 aa2.64□□□□□ -1.99
SSF2YDR312W RPN12P32496 274 aa2.64□□□□□ -1.99
SSF2YDR312W NDC1P32500 655 aa2.64□□□□□ -1.99
SSF2YDR312W FRE1P32791 686 aa2.64□□□□□ -1.99
SSF2YDR312W PTR2P32901 601 aa2.64□□□□□ -1.99
SSF2YDR312W MSN2P33748 704 aa2.64□□□□□ -1.99
SSF2YDR312W DUG2P38149 878 aa2.64□□□□□ -1.99
SSF2YDR312W RPR2P40571 144 aa2.64□□□□□ -1.99
SSF2YDR312W ALK1P43633 760 aaKnown RBP2.64□□□□□ -1.99
SSF2YDR312W RTT101P47050 842 aa2.64□□□□□ -1.99
SSF2YDR312W FIN1Q03898 291 aa2.64□□□□□ -1.99
SSF2YDR312W TSR2Q06672 205 aaKnown RBP2.64□□□□□ -1.99
SSF2YDR312W YPR117WQ06116 2489 aa2.64□□□□□ -1.99
SSF2YDR312W FOB1O13329 566 aa2.63□□□□□ -1.99
SSF2YDR312W COR1P07256 457 aa2.63□□□□□ -1.99
SSF2YDR312W PRP2P20095 876 aaPredicted RBP2.63□□□□□ -1.99
SSF2YDR312W YCR007CP25354 239 aa2.63□□□□□ -1.99
SSF2YDR312W YME1P32795 747 aa2.63□□□□□ -1.99
SSF2YDR312W BNA4P38169 460 aa2.63□□□□□ -1.99
SSF2YDR312W MUM2P38236 366 aa2.63□□□□□ -1.99
SSF2YDR312W MTC4P38335 694 aaKnown RBP2.63□□□□□ -1.99
SSF2YDR312W UTP9P38882 575 aaKnown RBP2.63□□□□□ -1.99
SSF2YDR312W YHR218WP38899 603 aa2.63□□□□□ -1.99
SSF2YDR312W RPH1P39956 796 aa2.63□□□□□ -1.99
SSF2YDR312W SPO22P40511 975 aa2.63□□□□□ -1.99
SSF2YDR312W PET130P47065 347 aa2.63□□□□□ -1.99
SSF2YDR312W SRB7P47822 140 aa2.63□□□□□ -1.99
SSF2YDR312W RBG2P53295 368 aaKnown RBP2.63□□□□□ -1.99
SSF2YDR312W ZPR1P53303 486 aaKnown RBP2.63□□□□□ -1.99
SSF2YDR312W HEF3P53978 1044 aaKnown RBP2.63□□□□□ -1.99
SSF2YDR312W RPT6Q01939 405 aaKnown RBP2.63□□□□□ -1.99
SSF2YDR312W ERO1Q03103 563 aa2.63□□□□□ -1.99
SSF2YDR312W IVY1Q04934 453 aa2.63□□□□□ -1.99
SSF2YDR312W PHO92Q06390 306 aa2.63□□□□□ -1.99
SSF2YDR312W YDL009CQ12210 107 aa2.63□□□□□ -1.99
SSF2YDR312W FKS3Q04952 1785 aa2.63□□□□□ -1.99
SSF2YDR312W YRF1-3P0CX14 1859 aa2.63□□□□□ -1.99
SSF2YDR312W YRF1-7P0CX15 1859 aa2.63□□□□□ -1.99
SSF2YDR312W YRF1-6P53819 1859 aa2.63□□□□□ -1.99
SSF2YDR312W CAR1P00812 333 aaKnown RBP2.62□□□□□ -1.99
SSF2YDR312W ARG3P05150 338 aa2.62□□□□□ -1.99
SSF2YDR312W MRP7P12687 371 aa2.62□□□□□ -1.99
SSF2YDR312W MTF1P14908 341 aaKnown RBP2.62□□□□□ -1.99
SSF2YDR312W OSM1P21375 501 aaKnown RBP2.62□□□□□ -1.99
SSF2YDR312W OCA4P25366 362 aa2.62□□□□□ -1.99
SSF2YDR312W PAP1P29468 568 aaKnown RBP2.62□□□□□ -1.99
SSF2YDR312W SPC110P32380 944 aa2.62□□□□□ -1.99
SSF2YDR312W UTR4P32626 227 aa2.62□□□□□ -1.99
SSF2YDR312W MRE11P32829 692 aa2.62□□□□□ -1.99
SSF2YDR312W KEL1P38853 1164 aaKnown RBP2.62□□□□□ -1.99
SSF2YDR312W MDM31P38880 579 aa2.62□□□□□ -1.99
SSF2YDR312W MBB1P39534 108 aa2.62□□□□□ -1.99
SSF2YDR312W YFR016CP43597 1233 aaKnown RBP2.62□□□□□ -1.99
SSF2YDR312W RMD8P43620 662 aa2.62□□□□□ -1.99
SSF2YDR312W YDL186WP48568 277 aa2.62□□□□□ -1.99
SSF2YDR312W YDR239CQ03780 787 aa2.62□□□□□ -1.99
SSF2YDR312W ERP1Q05359 219 aaKnown RBP2.62□□□□□ -1.99
SSF2YDR312W MRPL51Q06090 140 aaPredicted RBP2.62□□□□□ -1.99
SSF2YDR312W COG4Q06096 861 aa2.62□□□□□ -1.99
SSF2YDR312W RSA1Q08932 381 aa2.62□□□□□ -1.99
SSF2YDR312W AYT1Q12226 474 aa2.62□□□□□ -1.99
SSF2YDR312W SET6Q12529 373 aa2.62□□□□□ -1.99
SSF2YDR312W YLL067CQ07888 1374 aa2.62□□□□□ -1.99
SSF2YDR312W YLL066CQ99208 1374 aa2.62□□□□□ -1.99
SSF2YDR312W YLR419WQ06698 1435 aaKnown RBP2.62□□□□□ -1.99
SSF2YDR312W MES1P00958 751 aaKnown RBP2.61□□□□□ -1.99
SSF2YDR312W GDH1P07262 454 aaKnown RBP2.61□□□□□ -1.99
SSF2YDR312W MCK1P21965 375 aaKnown RBP2.61□□□□□ -1.99
SSF2YDR312W JNM1P36224 373 aa2.61□□□□□ -1.99
SSF2YDR312W APE3P37302 537 aaKnown RBP2.61□□□□□ -1.99
SSF2YDR312W CST26P38226 397 aa2.61□□□□□ -1.99
SSF2YDR312W ERP2P39704 215 aa2.61□□□□□ -1.99
SSF2YDR312W COS10P52924 374 aa2.61□□□□□ -1.99
SSF2YDR312W CAF130P53280 1122 aaPredicted RBP2.61□□□□□ -1.99
SSF2YDR312W RBS1Q05672 457 aaKnown RBP2.61□□□□□ -1.99
SSF2YDR312W TLG2Q08144 397 aa2.61□□□□□ -1.99
SSF2YDR312W CFT2Q12102 859 aaPredicted RBP2.61□□□□□ -1.99
SSF2YDR312W RKM5Q12367 367 aa2.61□□□□□ -1.99
SSF2YDR312W YDL007C-AQ2V2Q0 85 aa2.61□□□□□ -1.99
SSF2YDR312W HEM2P05373 342 aa2.61□□□□□ -1.99
SSF2YDR312W RPL20AP0CX23 172 aaKnown RBP2.61□□□□□ -1.99
SSF2YDR312W RPL20BP0CX24 172 aaPredicted RBP2.61□□□□□ -1.99
SSF2YDR312W GLK1P17709 500 aaKnown RBP2.61□□□□□ -1.99
SSF2YDR312W AGA1P32323 725 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms