RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-DYDR261C-D ISC10P32645 267 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D IPL1P38991 367 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D IMA5P40884 581 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D IKS1P47042 667 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D GND2P53319 492 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D RPT4P53549 437 aaKnown RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D CGI121Q03705 181 aaKnown RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D GPI13Q07830 1017 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D ISA2Q12425 185 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D AHA1Q12449 350 aaKnown RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D DCP1Q12517 231 aaPredicted RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D PAI3P01094 68 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D TRK1P12685 1235 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D YGL010WP25338 174 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D YCL049CP25577 312 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D MDH3P32419 343 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
YDR261C-DYDR261C-D COS9P36034 407 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D DOA1P36037 715 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D SRO77P38163 1010 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D BNA4P38169 460 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D FAA2P39518 744 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D OXA1P39952 402 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D NPP2P39997 493 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D SMB1P40018 196 aaKnown RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D UTP7P40055 554 aaKnown RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D YDL186WP48568 277 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D CPR8P53728 308 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D ACT1P60010 375 aaKnown RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D UTP15Q04305 513 aaKnown RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D ECM18Q04623 453 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D YMR074CQ04773 145 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D TPO4Q12256 659 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D RBD2Q12270 262 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D STE50P25344 346 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D SHE2P36068 246 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
YDR261C-DYDR261C-D MRPL24P36525 258 aaPredicted RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D NTC20P38302 140 aaPredicted RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D GTT1P40582 234 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D MCM22P47167 239 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D SPH1Q06160 661 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D RRP40Q08285 240 aaKnown RBP4.43□□□□□ -1.7
YDR261C-DYDR261C-D STB3Q12427 513 aa4.43□□□□□ -1.7
YDR261C-DYDR261C-D PBI2P0CT04 75 aaKnown RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D EXG1P23776 448 aaKnown RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D AHC2P25649 128 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D YIM1P28625 365 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D MSK1P32048 576 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D SRP40P32583 406 aaPredicted RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D GLY1P37303 387 aaKnown RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D ERT1P38140 529 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D ECM13P38195 257 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D EFM1P38732 585 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D POP2P39008 433 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D END3P39013 349 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D GZF3P42944 551 aaKnown RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D LSB6P42951 607 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D CPR7P47103 393 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D OSH6Q02201 448 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D YMR279CQ03263 540 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D RRG8Q06109 277 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D YTM1Q12024 460 aaPredicted RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D SWT1Q12104 458 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D ERV2Q12284 196 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D YOR012WQ12351 137 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D SFG1Q12507 346 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D SSN2P38931 1420 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D RPB3P16370 318 aaKnown RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D AEP2P22136 580 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D YCP4P25349 247 aaKnown RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D SUA7P29055 345 aaPredicted RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D NUP2P32499 720 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D SUR1P33300 382 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D IML3P38265 245 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D YBR220CP38318 560 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D VHC1P38329 1120 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D YHR033WP38690 423 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D NIT2P47016 307 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D MTR3P48240 250 aaPredicted RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D COG1P53079 417 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D DRN1P53255 507 aaKnown RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D GPI1P53306 609 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D UME1Q03010 460 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D SND1Q04007 877 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D YDR124WQ04608 324 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D ECM22Q05958 814 aaPredicted RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D YPR127WQ06494 345 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D CRD1Q07560 283 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D SKI7Q08491 747 aaPredicted RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D ENV9Q08651 330 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D MLH3Q12083 715 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D UBX3Q12229 455 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D RRP42Q12277 265 aaPredicted RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D VCX1Q99385 411 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D ENO1P00924 437 aaKnown RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D PHO4P07270 312 aaKnown RBP4.42□□□□□ -1.7
YDR261C-DYDR261C-D GAL2P13181 574 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D PHO85P17157 305 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D NFS1P25374 497 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D KAR4P25583 335 aa4.42□□□□□ -1.7
YDR261C-DYDR261C-D ADK2P26364 225 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms