RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W SNG1P46950 547 aa4.24□□□□□ -1.73
SSB1YDL229W LYS20P48570 428 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W CUE3P53137 624 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W DUO1P53168 247 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W YNL040WP53960 456 aaPredicted RBP4.24□□□□□ -1.73
SSB1YDL229W YAT1P80235 687 aa4.24□□□□□ -1.73
SSB1YDL229W LGE1Q02796 332 aaKnown RBP4.24□□□□□ -1.73
SSB1YDL229W MRX10Q05648 414 aa4.24□□□□□ -1.73
SSB1YDL229W RRD2Q12461 358 aa4.24□□□□□ -1.73
SSB1YDL229W COBP00163 385 aa4.23□□□□□ -1.73
SSB1YDL229W PRC1P00729 532 aa4.23□□□□□ -1.73
SSB1YDL229W SWI5P08153 709 aa4.23□□□□□ -1.73
SSB1YDL229W SIR1P21691 654 aa4.23□□□□□ -1.73
SSB1YDL229W SGV1P23293 657 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W PRE7P23724 241 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W RNA14P25298 677 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W YCR051WP25631 222 aa4.23□□□□□ -1.73
SSB1YDL229W IDH1P28834 360 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
SSB1YDL229W RPS1AP33442 255 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W LST4P34239 828 aa4.23□□□□□ -1.73
SSB1YDL229W CCT2P39076 527 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W YJL206CP39529 758 aa4.23□□□□□ -1.73
SSB1YDL229W ACO2P39533 789 aa4.23□□□□□ -1.73
SSB1YDL229W GPB2P39717 880 aa4.23□□□□□ -1.73
SSB1YDL229W ECM10P39987 644 aa4.23□□□□□ -1.73
SSB1YDL229W SAD1P43589 448 aa4.23□□□□□ -1.73
SSB1YDL229W ART5P53244 586 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W YNR062CP53748 327 aa4.23□□□□□ -1.73
SSB1YDL229W OCA2P53949 197 aa4.23□□□□□ -1.73
SSB1YDL229W MRPL13Q02204 264 aa4.23□□□□□ -1.73
SSB1YDL229W PRM15Q03262 622 aa4.23□□□□□ -1.73
SSB1YDL229W SCS7Q03529 384 aa4.23□□□□□ -1.73
SSB1YDL229W SEG1Q04279 960 aa4.23□□□□□ -1.73
SSB1YDL229W AIM32Q04689 311 aa4.23□□□□□ -1.73
SSB1YDL229W GTO3Q04806 366 aa4.23□□□□□ -1.73
SSB1YDL229W NEJ1Q06148 342 aa4.23□□□□□ -1.73
SSB1YDL229W HDA2Q06629 674 aa4.23□□□□□ -1.73
SSB1YDL229W COS7Q07788 383 aa4.23□□□□□ -1.73
SSB1YDL229W FEX2Q08991 375 aa4.23□□□□□ -1.73
SSB1YDL229W ATP14Q12349 124 aa4.23□□□□□ -1.73
SSB1YDL229W AGC1Q12482 902 aa4.23□□□□□ -1.73
SSB1YDL229W AFI1Q99222 893 aa4.23□□□□□ -1.73
SSB1YDL229W YPT6Q99260 215 aa4.23□□□□□ -1.73
SSB1YDL229W NUP192P47054 1683 aa4.23□□□□□ -1.73
SSB1YDL229W ILV2P07342 687 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W GAL7P08431 366 aa4.23□□□□□ -1.73
SSB1YDL229W RPS18AP0CX55 146 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W RPS18BP0CX56 146 aaPredicted RBP4.23□□□□□ -1.73
SSB1YDL229W TRK1P12685 1235 aa4.23□□□□□ -1.73
SSB1YDL229W NPR1P22211 790 aa4.23□□□□□ -1.73
SSB1YDL229W RFA1P22336 621 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W AGP1P25376 633 aa4.23□□□□□ -1.73
SSB1YDL229W RHB1P25378 209 aa4.23□□□□□ -1.73
SSB1YDL229W DCC1P25559 380 aa4.23□□□□□ -1.73
SSB1YDL229W PDC6P26263 563 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W SHP1P34223 423 aa4.23□□□□□ -1.73
SSB1YDL229W SRP102P36057 244 aaPredicted RBP4.23□□□□□ -1.73
SSB1YDL229W NTR2P36118 322 aaPredicted RBP4.23□□□□□ -1.73
SSB1YDL229W ETR1P38071 380 aa4.23□□□□□ -1.73
SSB1YDL229W FIG1P38224 298 aa4.23□□□□□ -1.73
SSB1YDL229W SLM4P38247 162 aa4.23□□□□□ -1.73
SSB1YDL229W SHG1P38337 142 aa4.23□□□□□ -1.73
SSB1YDL229W PCM1P38628 557 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W PEX28P38848 579 aa4.23□□□□□ -1.73
SSB1YDL229W CFD1P40558 293 aa4.23□□□□□ -1.73
SSB1YDL229W YIR035CP40579 254 aa4.23□□□□□ -1.73
SSB1YDL229W LCB2P40970 561 aa4.23□□□□□ -1.73
SSB1YDL229W THI12P42883 340 aa4.23□□□□□ -1.73
SSB1YDL229W LSB6P42951 607 aa4.23□□□□□ -1.73
SSB1YDL229W THI5P43534 340 aa4.23□□□□□ -1.73
SSB1YDL229W GNA1P43577 159 aaPredicted RBP4.23□□□□□ -1.73
SSB1YDL229W YPT32P51996 222 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W PMT5P52867 743 aa4.23□□□□□ -1.73
SSB1YDL229W PKP2P53170 491 aa4.23□□□□□ -1.73
SSB1YDL229W RHO3Q00245 231 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W SED5Q01590 340 aa4.23□□□□□ -1.73
SSB1YDL229W MSC3Q05812 728 aa4.23□□□□□ -1.73
SSB1YDL229W THI13Q07748 340 aa4.23□□□□□ -1.73
SSB1YDL229W PML1Q07930 204 aaPredicted RBP4.23□□□□□ -1.73
SSB1YDL229W RRP40Q08285 240 aaKnown RBP4.23□□□□□ -1.73
SSB1YDL229W BMT6Q12291 365 aa4.23□□□□□ -1.73
SSB1YDL229W TRM11Q12463 433 aa4.23□□□□□ -1.73
SSB1YDL229W LDB19Q12502 818 aa4.23□□□□□ -1.73
SSB1YDL229W AI5_ALPHAQ9ZZX1 630 aa4.23□□□□□ -1.73
SSB1YDL229W HIS5P07172 385 aa4.22□□□□□ -1.73
SSB1YDL229W YFR010W-AP0C5N0 62 aa4.22□□□□□ -1.73
SSB1YDL229W PET54P10834 293 aa4.22□□□□□ -1.73
SSB1YDL229W CBS2P14905 389 aa4.22□□□□□ -1.73
SSB1YDL229W RAM1P22007 431 aa4.22□□□□□ -1.73
SSB1YDL229W SPO11P23179 398 aa4.22□□□□□ -1.73
SSB1YDL229W GEX1P25596 615 aa4.22□□□□□ -1.73
SSB1YDL229W DBF4P32325 704 aa4.22□□□□□ -1.73
SSB1YDL229W NDC1P32500 655 aa4.22□□□□□ -1.73
SSB1YDL229W YOX1P34161 385 aa4.22□□□□□ -1.73
SSB1YDL229W ALY1P36117 915 aa4.22□□□□□ -1.73
SSB1YDL229W APE3P37302 537 aaKnown RBP4.22□□□□□ -1.73
SSB1YDL229W DUG2P38149 878 aa4.22□□□□□ -1.73
SSB1YDL229W APN2P38207 520 aa4.22□□□□□ -1.73
SSB1YDL229W FAT1P38225 669 aa4.22□□□□□ -1.73
SSB1YDL229W ECM2P38241 364 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms