RNA–Protein interactions for RNA: YDL127W

PCL2, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL2, Length 927 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL2	YDL127W	HNT3	Q08702	217 aa		4.14	□□□□□ -1.75
PCL2	YDL127W	YLL056C	Q12177	298 aa		4.14	□□□□□ -1.75
PCL2	YDL127W	SFI1	Q12369	946 aa		4.14	□□□□□ -1.75
PCL2	YDL127W	GRX6	Q12438	231 aa		4.14	□□□□□ -1.75
PCL2	YDL127W	PMR1	P13586	950 aa		4.13	□□□□□ -1.75
PCL2	YDL127W	FRE2	P36033	711 aa		4.13	□□□□□ -1.75
PCL2	YDL127W	YBR139W	P38109	508 aa		4.13	□□□□□ -1.75
PCL2	YDL127W	YGL108C	P53139	140 aa		4.13	□□□□□ -1.75
PCL2	YDL127W	JJJ1	P53863	590 aa		4.13	□□□□□ -1.75
PCL2	YDL127W	TLG2	Q08144	397 aa		4.13	□□□□□ -1.75
PCL2	YDL127W	RTN2	Q12443	393 aa		4.13	□□□□□ -1.75
PCL2	YDL127W	FUN19	P28003	413 aa	Predicted RBP	4.12	□□□□□ -1.75
PCL2	YDL127W	NDI1	P32340	513 aa		4.12	□□□□□ -1.75
PCL2	YDL127W	PMT1	P33775	817 aa		4.12	□□□□□ -1.75
PCL2	YDL127W	BYE1	P36106	594 aa		4.12	□□□□□ -1.75
PCL2	YDL127W	LSM5	P40089	93 aa	Known RBP	4.12	□□□□□ -1.75
PCL2	YDL127W	SYG1	P40528	902 aa		4.12	□□□□□ -1.75
PCL2	YDL127W	RMD9	P53140	646 aa	Known RBP	4.12	□□□□□ -1.75
PCL2	YDL127W	YGR250C	P53316	781 aa	Known RBP	4.12	□□□□□ -1.75
PCL2	YDL127W	NCS2	P53923	493 aa	Predicted RBP	4.12	□□□□□ -1.75
PCL2	YDL127W	YMR155W	Q03795	547 aa		4.12	□□□□□ -1.75
PCL2	YDL127W	RSA1	Q08932	381 aa		4.12	□□□□□ -1.75
PCL2	YDL127W	CPR1	P14832	162 aa	Known RBP	4.11	□□□□□ -1.75
PCL2	YDL127W	GPI10	P30777	616 aa		4.11	□□□□□ -1.75
PCL2	YDL127W	AFG1	P32317	509 aa		4.11	□□□□□ -1.75
PCL2	YDL127W	AVT5	P38176	459 aa		4.11	□□□□□ -1.75
PCL2	YDL127W	SMF1	P38925	575 aa		4.11	□□□□□ -1.75
PCL2	YDL127W	YPI1	P43587	155 aa		4.11	□□□□□ -1.75
PCL2	YDL127W	PNG1	Q02890	363 aa		4.11	□□□□□ -1.75
PCL2	YDL127W	PIR3	Q03180	325 aa		4.11	□□□□□ -1.75
PCL2	YDL127W	RKM5	Q12367	367 aa		4.11	□□□□□ -1.75
PCL2	YDL127W	YCL021W-A	Q96VH3	125 aa		4.11	□□□□□ -1.75
PCL2	YDL127W	SPS4	P09937	338 aa		4.1	□□□□□ -1.75
PCL2	YDL127W	YAR066W	P0CX18	203 aa		4.1	□□□□□ -1.75
PCL2	YDL127W	YHR214W	P0CX19	203 aa		4.1	□□□□□ -1.75
PCL2	YDL127W	SPB1	P25582	841 aa	Predicted RBP	4.1	□□□□□ -1.75
PCL2	YDL127W	PCA1	P38360	1216 aa		4.1	□□□□□ -1.75
PCL2	YDL127W	GPD2	P41911	440 aa	Known RBP	4.1	□□□□□ -1.75
PCL2	YDL127W	YGR149W	P48236	432 aa		4.1	□□□□□ -1.75
PCL2	YDL127W	WSC2	P53832	503 aa		4.1	□□□□□ -1.75
PCL2	YDL127W	TAP42	Q04372	366 aa		4.1	□□□□□ -1.75
PCL2	YDL127W	RRN11	Q04712	507 aa		4.1	□□□□□ -1.75
PCL2	YDL127W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
PCL2	YDL127W	HIP1	P06775	603 aa		4.09	□□□□□ -1.75
PCL2	YDL127W	RNA14	P25298	677 aa	Known RBP	4.09	□□□□□ -1.75
PCL2	YDL127W	RPC53	P25441	422 aa		4.09	□□□□□ -1.75
PCL2	YDL127W	MRP4	P32902	394 aa		4.09	□□□□□ -1.75
PCL2	YDL127W	ISC1	P40015	477 aa	Known RBP	4.09	□□□□□ -1.75
PCL2	YDL127W	MKT1	P40850	830 aa	Known RBP	4.09	□□□□□ -1.75
PCL2	YDL127W	YFL067W	P43537	175 aa		4.09	□□□□□ -1.75
PCL2	YDL127W	ODC1	Q03028	310 aa		4.09	□□□□□ -1.75
PCL2	YDL127W	HEL2	Q05580	639 aa	Known RBP	4.09	□□□□□ -1.75
PCL2	YDL127W	VTA1	Q06263	330 aa		4.09	□□□□□ -1.75
PCL2	YDL127W	YOL159C-A	Q3E769	90 aa		4.09	□□□□□ -1.75
PCL2	YDL127W	PDX1	P16451	410 aa		4.08	□□□□□ -1.76
PCL2	YDL127W	CLC1	P17891	233 aa		4.08	□□□□□ -1.76
PCL2	YDL127W	YCR100C	P25606	316 aa		4.08	□□□□□ -1.76
PCL2	YDL127W	GLC7	P32598	312 aa	Known RBP	4.08	□□□□□ -1.76
PCL2	YDL127W	YMR147W	P40218	223 aa	Known RBP	4.08	□□□□□ -1.76
PCL2	YDL127W	SSN8	P47821	323 aa		4.08	□□□□□ -1.76
PCL2	YDL127W	IBD2	P53892	351 aa		4.08	□□□□□ -1.76
PCL2	YDL127W	HEM15	P16622	393 aa		4.07	□□□□□ -1.76
PCL2	YDL127W	ATP10	P18496	279 aa		4.07	□□□□□ -1.76
PCL2	YDL127W	IDH2	P28241	369 aa	Known RBP	4.07	□□□□□ -1.76
PCL2	YDL127W	GCD10	P41814	478 aa		4.07	□□□□□ -1.76
PCL2	YDL127W	AVT4	P50944	713 aa		4.07	□□□□□ -1.76
PCL2	YDL127W	POP6	P53218	158 aa		4.07	□□□□□ -1.76
PCL2	YDL127W	DSL1	P53847	754 aa		4.07	□□□□□ -1.76
PCL2	YDL127W	GPH1	P06738	902 aa	Known RBP	4.06	□□□□□ -1.76
PCL2	YDL127W	SPT15	P13393	240 aa	Known RBP	4.06	□□□□□ -1.76
PCL2	YDL127W	VMA8	P32610	256 aa	Known RBP	4.06	□□□□□ -1.76
PCL2	YDL127W	SAS3	P34218	831 aa		4.06	□□□□□ -1.76
PCL2	YDL127W	THI2	P38141	450 aa		4.06	□□□□□ -1.76
PCL2	YDL127W	KEL1	P38853	1164 aa	Known RBP	4.06	□□□□□ -1.76
PCL2	YDL127W	TFG2	P41896	400 aa	Predicted RBP	4.06	□□□□□ -1.76
PCL2	YDL127W	YDR131C	Q03899	556 aa		4.06	□□□□□ -1.76
PCL2	YDL127W	MUM3	Q08750	479 aa		4.06	□□□□□ -1.76
PCL2	YDL127W	YPL199C	Q08954	240 aa		4.06	□□□□□ -1.76
PCL2	YDL127W	SUP35	P05453	685 aa	Known RBP	4.05	□□□□□ -1.76
PCL2	YDL127W	HOM3	P10869	527 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	CLB3	P24870	427 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
PCL2	YDL127W	YOX1	P34161	385 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	NAT2	P37293	288 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	SDS24	P38314	527 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	SPG5	P42933	373 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	RRT5	P43607	289 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	MNP1	P53163	194 aa	Predicted RBP	4.05	□□□□□ -1.76
PCL2	YDL127W	RSC1	P53236	928 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	ARK1	P53974	638 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	MRP51	Q02950	344 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	HSP31	Q04432	237 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	ESA1	Q08649	445 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	RRP12	Q12754	1228 aa	Known RBP	4.05	□□□□□ -1.76
PCL2	YDL127W	YER078W-A	Q3E7A2	54 aa		4.05	□□□□□ -1.76
PCL2	YDL127W	HHF1	P02309	103 aa	Known RBP	4.04	□□□□□ -1.76
PCL2	YDL127W	SPS22	P25380	463 aa		4.04	□□□□□ -1.76
PCL2	YDL127W	DEG1	P31115	442 aa	Known RBP	4.04	□□□□□ -1.76
PCL2	YDL127W	YBL059W	P34224	193 aa		4.04	□□□□□ -1.76
PCL2	YDL127W	HCS1	P34243	683 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms