RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, humanhuman

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-205ENST00000604609 TRIM29Q14134 588 aa11.26□□□□□ -0.61
GDF15-205ENST00000604609 BECN1Q14457 450 aa11.26□□□□□ -0.61
GDF15-205ENST00000604609 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
GDF15-205ENST00000604609 SLC9C1Q4G0N8 1177 aa11.26□□□□□ -0.61
GDF15-205ENST00000604609 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
GDF15-205ENST00000604609 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
GDF15-205ENST00000604609 VSIG10LQ86VR7 867 aa11.26□□□□□ -0.61
GDF15-205ENST00000604609 WDR11Q9BZH6 1224 aa11.26□□□□□ -0.61
GDF15-205ENST00000604609 FTOQ9C0B1 505 aaKnown RBP eCLIP11.26□□□□□ -0.61
GDF15-205ENST00000604609 ADD3Q9UEY8 706 aaKnown RBP11.26□□□□□ -0.61
GDF15-205ENST00000604609 MRVI1Q9Y6F6 885 aa11.26□□□□□ -0.61
GDF15-205ENST00000604609 SLC37A4O43826 429 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 ARP10275 920 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 SMPD1P17405 629 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 XBP1P17861 261 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 DDIT3P35638 169 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 TOB1P50616 345 aaPredicted RBP11.25□□□□□ -0.61
GDF15-205ENST00000604609 PRMT2P55345 433 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 SP2Q02086 613 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 RESTQ13127 1097 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 AP3B2Q13367 1082 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 ACVR2BQ13705 512 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 CCDC144BQ3MJ40 725 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 MFSD14CQ5VZR4 134 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 PCNX4Q63HM2 1172 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 LENG9Q96B70 501 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 SYNGAP1Q96PV0 1343 aa11.25□□□□□ -0.61
GDF15-205ENST00000604609 ZNF236Q9UL36 1845 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 IGLV3-22A0A075B6J6 115 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 CCDC194A0A1B0GVG4 234 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 MYADML2A6NDP7 307 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 ASB14A6NK59 587 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 STX6O43752 255 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 ATP9AO75110 1047 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 FOSP01100 380 aaPredicted RBP11.24□□□□□ -0.61
GDF15-205ENST00000604609 U2AF2P26368 475 aaKnown RBP eCLIP11.24□□□□□ -0.613e-17■■■■□ 23.6
GDF15-205ENST00000604609 CNGA1P29973 690 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 CCND2P30279 289 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 ARHGEF6Q15052 776 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 NONOQ15233 471 aaKnown RBP eCLIP11.24□□□□□ -0.61
GDF15-205ENST00000604609 STXBP2Q15833 593 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 LY6KQ17RY6 165 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 LETM2Q2VYF4 491 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 GALNT17Q6IS24 598 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 KRT25Q7Z3Z0 450 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 NOSTRINQ8IVI9 506 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 BICD2Q8TD16 824 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 ZNF333Q96JL9 665 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 SLC5A4Q9NY91 659 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 MAP3K20Q9NYL2 800 aaKnown RBP11.24□□□□□ -0.61
GDF15-205ENST00000604609 UBIAD1Q9Y5Z9 338 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 LCTP09848 1927 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 CASP8AP2Q9UKL3 1982 aa11.24□□□□□ -0.61
GDF15-205ENST00000604609 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
GDF15-205ENST00000604609 CCL5P13501 91 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 ITGB3BPQ13352 177 aaPredicted RBP11.23□□□□□ -0.61
GDF15-205ENST00000604609 SAFBQ15424 915 aaKnown RBP eCLIP11.23□□□□□ -0.61
GDF15-205ENST00000604609 ZNF174Q15697 407 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 PRR16Q569H4 304 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 CCDC62Q6P9F0 684 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 SAMD3Q8N6K7 520 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 PPP1R13LQ8WUF5 828 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 ARMC5Q96C12 935 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 INPP4AQ96PE3 977 aaPredicted RBP11.23□□□□□ -0.61
GDF15-205ENST00000604609 IWS1Q96ST2 819 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 MXRA8Q9BRK3 442 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 GLT8D2Q9H1C3 349 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 TMEM60Q9H2L4 133 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 FOXP1Q9H334 677 aaPredicted RBP11.23□□□□□ -0.61
GDF15-205ENST00000604609 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
GDF15-205ENST00000604609 CNPY2Q9Y2B0 182 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 PCDHB6Q9Y5E3 794 aa11.23□□□□□ -0.61
GDF15-205ENST00000604609 SPATA31C2B4DYI2 1134 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 PGK1P00558 417 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 CYP3A4P08684 503 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 UBA1P22314 1058 aaKnown RBP11.22□□□□□ -0.61
GDF15-205ENST00000604609 GNL2Q13823 731 aaKnown RBP11.22□□□□□ -0.61
GDF15-205ENST00000604609 CEP55Q53EZ4 464 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 LHX8Q68G74 356 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 NEK8Q86SG6 692 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 PLA2G4DQ86XP0 818 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
GDF15-205ENST00000604609 DEFB118Q96PH6 123 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 MAF1Q9H063 256 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
GDF15-205ENST00000604609 ABHD16BQ9H3Z7 469 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 VTA1Q9NP79 307 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 JADE2Q9NQC1 790 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 KCNH7Q9NS40 1196 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 DDX41Q9UJV9 622 aaKnown RBP11.22□□□□□ -0.61
GDF15-205ENST00000604609 KIF3AQ9Y496 699 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 CENPFP49454 3210 aa11.22□□□□□ -0.61
GDF15-205ENST00000604609 RBM47A0AV96 593 aaKnown RBP11.21□□□□□ -0.61
GDF15-205ENST00000604609 DDX39AO00148 427 aaKnown RBP11.21□□□□□ -0.61
GDF15-205ENST00000604609 MEIS1O00470 390 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms