RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 OXA1P39952 402 aa-1.2□□□□□ -2.6
snR53snR53 SPC105P53148 917 aa-1.2□□□□□ -2.6
snR53snR53 ZRG17P53735 605 aa-1.2□□□□□ -2.6
snR53snR53 CTI6Q08923 506 aa-1.2□□□□□ -2.6
snR53snR53 FRE8Q12209 686 aa-1.2□□□□□ -2.6
snR53snR53 YOR338WQ99326 363 aa-1.2□□□□□ -2.6
snR53snR53 CYC3P06182 269 aa-1.21□□□□□ -2.6
snR53snR53 ALK2P32789 676 aaPredicted RBP-1.21□□□□□ -2.6
snR53snR53 YBR225WP38321 900 aa-1.21□□□□□ -2.6
snR53snR53 ZDS2P54786 942 aa-1.21□□□□□ -2.6
snR53snR53 NUP116Q02630 1113 aa-1.21□□□□□ -2.6
snR53snR53 TIR4Q12218 487 aaPredicted RBP-1.21□□□□□ -2.6
snR53snR53 PHO81P17442 1178 aa-1.22□□□□□ -2.6
snR53snR53 COX11P19516 300 aaKnown RBP-1.22□□□□□ -2.6
snR53snR53 PHO3P24031 467 aa-1.22□□□□□ -2.6
snR53snR53 KAR9P32526 644 aa-1.22□□□□□ -2.6
snR53snR53 TSC10P38342 320 aa-1.22□□□□□ -2.6
snR53snR53 PCF11P39081 626 aaPredicted RBP-1.22□□□□□ -2.6
snR53snR53 SWD1P39706 426 aa-1.22□□□□□ -2.6
snR53snR53 GPP2P40106 250 aaKnown RBP-1.22□□□□□ -2.6
snR53snR53 YIL059CP40520 121 aa-1.22□□□□□ -2.6
snR53snR53 BUD6P41697 788 aa-1.22□□□□□ -2.6
snR53snR53 YJR154WP47181 346 aa-1.22□□□□□ -2.6
snR53snR53 PPM1Q04081 328 aa-1.22□□□□□ -2.6
snR53snR53 VIP1Q06685 1146 aaKnown RBP-1.22□□□□□ -2.6
snR53snR53 RPL8AP17076 256 aaKnown RBP-1.23□□□□□ -2.61
snR53snR53 APE2P32454 952 aaKnown RBP-1.23□□□□□ -2.61
snR53snR53 HIR2P32480 875 aa-1.23□□□□□ -2.61
snR53snR53 ECT1P33412 323 aa-1.23□□□□□ -2.61
snR53snR53 MTR2P34232 184 aaKnown RBP-1.23□□□□□ -2.61
snR53snR53 YKL023WP36103 277 aaKnown RBP-1.23□□□□□ -2.61
snR53snR53 OM14P38325 134 aa-1.23□□□□□ -2.61
snR53snR53 CHL4P38907 458 aa-1.23□□□□□ -2.61
snR53snR53 DPH1P40487 425 aaKnown RBP-1.23□□□□□ -2.61
snR53snR53 ERR3P42222 437 aa-1.23□□□□□ -2.61
snR53snR53 GPI1P53306 609 aa-1.23□□□□□ -2.61
snR53snR53 NUR1Q12066 484 aa-1.23□□□□□ -2.61
snR53snR53 YOR019WQ99248 730 aa-1.23□□□□□ -2.61
snR53snR53 TPI1P00942 248 aaKnown RBP-1.24□□□□□ -2.61
snR53snR53 SPO16P17122 198 aa-1.24□□□□□ -2.61
snR53snR53 CDC50P25656 391 aa-1.24□□□□□ -2.61
snR53snR53 SNU114P36048 1008 aaKnown RBP-1.24□□□□□ -2.61
snR53snR53 PAM1P37304 830 aaKnown RBP-1.24□□□□□ -2.61
snR53snR53 NRG2P38082 220 aa-1.24□□□□□ -2.61
snR53snR53 FHL1P39521 936 aa-1.24□□□□□ -2.61
snR53snR53 GPP1P41277 250 aaKnown RBP-1.24□□□□□ -2.61
snR53snR53 SLD3P53135 668 aa-1.24□□□□□ -2.61
snR53snR53 ERG26P53199 349 aaKnown RBP-1.24□□□□□ -2.61
snR53snR53 CAF130P53280 1122 aaPredicted RBP-1.24□□□□□ -2.61
snR53snR53 TRS130Q03660 1102 aa-1.24□□□□□ -2.61
snR53snR53 BRE1Q07457 700 aaKnown RBP-1.24□□□□□ -2.61
snR53snR53 RLM1Q12224 676 aa-1.24□□□□□ -2.61
snR53snR53 RIT1P23796 513 aa-1.25□□□□□ -2.61
snR53snR53 ELO2P25358 347 aa-1.25□□□□□ -2.61
snR53snR53 SGM1P47166 707 aa-1.25□□□□□ -2.61
snR53snR53 YET2Q04210 160 aa-1.25□□□□□ -2.61
snR53snR53 JID1Q12350 301 aa-1.25□□□□□ -2.61
snR53snR53 TKL2P33315 681 aa-1.26□□□□□ -2.61
snR53snR53 SDS22P36047 338 aa-1.26□□□□□ -2.61
snR53snR53 COS4P43542 379 aa-1.26□□□□□ -2.61
snR53snR53 BIR1P47134 954 aa-1.26□□□□□ -2.61
snR53snR53 COQ5P49017 307 aa-1.26□□□□□ -2.61
snR53snR53 DSD1P53095 428 aa-1.26□□□□□ -2.61
snR53snR53 RAD61Q99359 647 aa-1.26□□□□□ -2.61
snR53snR53 RAD52P06778 471 aaKnown RBP-1.27□□□□□ -2.61
snR53snR53 SNT1P25357 1226 aa-1.27□□□□□ -2.61
snR53snR53 PRR1P28708 518 aa-1.27□□□□□ -2.61
snR53snR53 ECM25P32525 599 aa-1.27□□□□□ -2.61
snR53snR53 SRB5P32585 307 aa-1.27□□□□□ -2.61
snR53snR53 OGG1P53397 376 aaPredicted RBP-1.27□□□□□ -2.61
snR53snR53 RPL21AQ02753 160 aaKnown RBP-1.27□□□□□ -2.61
snR53snR53 UME1Q03010 460 aa-1.27□□□□□ -2.61
snR53snR53 PDS5Q04264 1277 aa-1.27□□□□□ -2.61
snR53snR53 NKP1Q12493 238 aa-1.27□□□□□ -2.61
snR53snR53 RPL21BQ12672 160 aaKnown RBP-1.27□□□□□ -2.61
snR53snR53 ATP2P00830 511 aaKnown RBP-1.28□□□□□ -2.61
snR53snR53 SWI4P25302 1093 aaKnown RBP-1.28□□□□□ -2.61
snR53snR53 YCR100CP25606 316 aa-1.28□□□□□ -2.61
snR53snR53 MIG1P27705 504 aa-1.28□□□□□ -2.61
snR53snR53 YBR137WP38276 179 aa-1.28□□□□□ -2.61
snR53snR53 MED6P38782 295 aa-1.28□□□□□ -2.61
snR53snR53 UIP3P39547 235 aa-1.28□□□□□ -2.61
snR53snR53 SAW1P39735 261 aa-1.28□□□□□ -2.61
snR53snR53 PUS4P48567 403 aaKnown RBP-1.28□□□□□ -2.61
snR53snR53 OCA1P50946 238 aaPredicted RBP-1.28□□□□□ -2.61
snR53snR53 DRN1P53255 507 aaKnown RBP-1.28□□□□□ -2.61
snR53snR53 ODC1Q03028 310 aa-1.28□□□□□ -2.61
snR53snR53 MST28P39552 234 aa-1.29□□□□□ -2.62
snR53snR53 PFK26P40433 827 aaKnown RBP-1.29□□□□□ -2.62
snR53snR53 LAM5P43560 674 aa-1.29□□□□□ -2.62
snR53snR53 MDE1P47095 244 aa-1.29□□□□□ -2.62
snR53snR53 GPG1P53130 126 aa-1.29□□□□□ -2.62
snR53snR53 YGL088WP53151 121 aa-1.29□□□□□ -2.62
snR53snR53 MRP51Q02950 344 aa-1.29□□□□□ -2.62
snR53snR53 RBS1Q05672 457 aaKnown RBP-1.29□□□□□ -2.62
snR53snR53 TEN1Q07921 160 aa-1.29□□□□□ -2.62
snR53snR53 CLP1Q08685 445 aaPredicted RBP-1.29□□□□□ -2.62
snR53snR53 SMF3Q12078 473 aaPredicted RBP-1.29□□□□□ -2.62
snR53snR53 RPB2P08518 1224 aaKnown RBP-1.3□□□□□ -2.62
snR53snR53 RPS23AP0CX29 145 aaKnown RBP-1.3□□□□□ -2.62
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms