RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C ECM8P38246 354 aa4.01□□□□□ -1.77
VHS3YOR054C ARN2P38724 620 aa4.01□□□□□ -1.77
VHS3YOR054C RTC3P38804 111 aaPredicted RBP4.01□□□□□ -1.77
VHS3YOR054C PZF1P39933 429 aa4.01□□□□□ -1.77
VHS3YOR054C YFL040WP43562 540 aa4.01□□□□□ -1.77
VHS3YOR054C ROK1P45818 564 aaPredicted RBP4.01□□□□□ -1.77
VHS3YOR054C ARC1P46672 376 aaKnown RBP4.01□□□□□ -1.77
VHS3YOR054C BUD13P46947 266 aaPredicted RBP4.01□□□□□ -1.77
VHS3YOR054C RCF2P53721 224 aa4.01□□□□□ -1.77
VHS3YOR054C ALG12P53730 551 aa4.01□□□□□ -1.77
VHS3YOR054C MNT4P53745 580 aa4.01□□□□□ -1.77
VHS3YOR054C YMR209CQ03648 457 aa4.01□□□□□ -1.77
VHS3YOR054C YML037CQ03703 340 aa4.01□□□□□ -1.77
VHS3YOR054C ENT5Q03769 411 aaKnown RBP4.01□□□□□ -1.77
VHS3YOR054C SIZ1Q04195 904 aa4.01□□□□□ -1.77
VHS3YOR054C APC4Q04601 652 aa4.01□□□□□ -1.77
VHS3YOR054C PRM6Q04705 352 aa4.01□□□□□ -1.77
VHS3YOR054C YDR222WQ04925 415 aa4.01□□□□□ -1.77
VHS3YOR054C YLR225CQ05948 407 aaKnown RBP4.01□□□□□ -1.77
VHS3YOR054C NBA1Q08229 501 aaKnown RBP4.01□□□□□ -1.77
VHS3YOR054C PIN2Q12057 282 aa4.01□□□□□ -1.77
VHS3YOR054C YCL001W-BQ96VH2 84 aa4.01□□□□□ -1.77
VHS3YOR054C HSH49Q99181 213 aaPredicted RBP4.01□□□□□ -1.77
VHS3YOR054C YBR085C-AO43137 85 aa4□□□□□ -1.77
VHS3YOR054C CYT1P07143 309 aa4□□□□□ -1.77
VHS3YOR054C CBP1P07252 654 aa4□□□□□ -1.77
VHS3YOR054C APA2P22108 325 aa4□□□□□ -1.77
VHS3YOR054C YCK1P23291 538 aa4□□□□□ -1.77
VHS3YOR054C VMA16P23968 213 aa4□□□□□ -1.77
VHS3YOR054C PTP1P25044 335 aa4□□□□□ -1.77
VHS3YOR054C CDC20P26309 610 aa4□□□□□ -1.77
VHS3YOR054C RPS7AP26786 190 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C PAH1P32567 862 aa4□□□□□ -1.77
VHS3YOR054C FRE1P32791 686 aa4□□□□□ -1.77
VHS3YOR054C SDS22P36047 338 aa4□□□□□ -1.77
VHS3YOR054C ALG3P38179 458 aa4□□□□□ -1.77
VHS3YOR054C BZZ1P38822 633 aa4□□□□□ -1.77
VHS3YOR054C YAP1801P38856 637 aa4□□□□□ -1.77
VHS3YOR054C HRB1P38922 454 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
VHS3YOR054C ARH1P48360 493 aa4□□□□□ -1.77
VHS3YOR054C CLA4P48562 842 aa4□□□□□ -1.77
VHS3YOR054C FOL2P51601 243 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C MRH4P53166 561 aa4□□□□□ -1.77
VHS3YOR054C YGL036WP53185 909 aaPredicted RBP4□□□□□ -1.77
VHS3YOR054C CLD1P53264 445 aa4□□□□□ -1.77
VHS3YOR054C CWC24P53769 259 aa4□□□□□ -1.77
VHS3YOR054C CUS2P53830 285 aaPredicted RBP4□□□□□ -1.77
VHS3YOR054C YNL095CP53932 642 aa4□□□□□ -1.77
VHS3YOR054C HSP31Q04432 237 aa4□□□□□ -1.77
VHS3YOR054C PHM6Q05637 104 aa4□□□□□ -1.77
VHS3YOR054C UBX5Q06682 500 aa4□□□□□ -1.77
VHS3YOR054C PEX27Q08580 376 aa4□□□□□ -1.77
VHS3YOR054C TRE2Q08693 809 aa4□□□□□ -1.77
VHS3YOR054C YDR018CQ12185 396 aa4□□□□□ -1.77
VHS3YOR054C SVS1Q12254 260 aa4□□□□□ -1.77
VHS3YOR054C ARP7Q12406 477 aa4□□□□□ -1.77
VHS3YOR054C DFG16Q99234 619 aa4□□□□□ -1.77
VHS3YOR054C GCN4P03069 281 aa4□□□□□ -1.77
VHS3YOR054C ARG3P05150 338 aa4□□□□□ -1.77
VHS3YOR054C CDC33P07260 213 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C SEC53P07283 254 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C CDC23P16522 626 aa4□□□□□ -1.77
VHS3YOR054C DMC1P25453 334 aa4□□□□□ -1.77
VHS3YOR054C SRO9P25567 434 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C PWP2P25635 923 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C ARO7P32178 256 aa4□□□□□ -1.77
VHS3YOR054C APE2P32454 952 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C PTM1P32857 523 aa4□□□□□ -1.77
VHS3YOR054C PMT1P33775 817 aa4□□□□□ -1.77
VHS3YOR054C PTC1P35182 281 aa4□□□□□ -1.77
VHS3YOR054C SPC34P36131 295 aa4□□□□□ -1.77
VHS3YOR054C YBR241CP38142 488 aa4□□□□□ -1.77
VHS3YOR054C SEA4P38164 1038 aa4□□□□□ -1.77
VHS3YOR054C KSP1P38691 1029 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C DED81P38707 554 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C OSH7P38755 437 aa4□□□□□ -1.77
VHS3YOR054C BIG1P38813 335 aa4□□□□□ -1.77
VHS3YOR054C CYC2P38909 366 aa4□□□□□ -1.77
VHS3YOR054C IPT1P38954 527 aa4□□□□□ -1.77
VHS3YOR054C NOP16P40007 231 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C FMP10P40098 244 aa4□□□□□ -1.77
VHS3YOR054C VMA13P41807 478 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C UPF3P48412 387 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C AIM14P53109 570 aa4□□□□□ -1.77
VHS3YOR054C YAT1P80235 687 aa4□□□□□ -1.77
VHS3YOR054C MTD1Q02046 320 aaKnown RBP4□□□□□ -1.77
VHS3YOR054C VPS74Q06385 345 aa4□□□□□ -1.77
VHS3YOR054C LUC7Q07508 261 aaPredicted RBP4□□□□□ -1.77
VHS3YOR054C ENT4Q07872 247 aa4□□□□□ -1.77
VHS3YOR054C TRM10Q12400 293 aa4□□□□□ -1.77
VHS3YOR054C SKM1Q12469 655 aa4□□□□□ -1.77
VHS3YOR054C HOM2P13663 365 aaKnown RBP3.99□□□□□ -1.77
VHS3YOR054C YCL049CP25577 312 aa3.99□□□□□ -1.77
VHS3YOR054C HRR25P29295 494 aaKnown RBP3.99□□□□□ -1.77
VHS3YOR054C PRO3P32263 286 aaKnown RBP3.99□□□□□ -1.77
VHS3YOR054C AEP1P32493 518 aa3.99□□□□□ -1.77
VHS3YOR054C APT2P36973 181 aa3.99□□□□□ -1.77
VHS3YOR054C FMP23P38231 175 aa3.99□□□□□ -1.77
VHS3YOR054C SOP4P39543 234 aaPredicted RBP3.99□□□□□ -1.77
VHS3YOR054C MGS1P40151 587 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms