RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
ECM16YMR128W ENA5Q12691 1091 aa3.73□□□□□ -1.81
ECM16YMR128W EFG1Q3E705 233 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W YBR298C-AQ8TGK4 73 aa3.73□□□□□ -1.81
ECM16YMR128W REP1P03871 373 aa3.73□□□□□ -1.81
ECM16YMR128W YCR090CP25654 182 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W SPC34P36131 295 aa3.73□□□□□ -1.81
ECM16YMR128W YBR284WP38150 797 aa3.73□□□□□ -1.81
ECM16YMR128W DSS1P39112 969 aa3.73□□□□□ -1.81
ECM16YMR128W HMF1P40037 129 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W BIO3P50277 480 aa3.73□□□□□ -1.81
ECM16YMR128W YNL034WP53963 612 aa3.73□□□□□ -1.81
ECM16YMR128W MRPL13Q02204 264 aa3.73□□□□□ -1.81
ECM16YMR128W HPT1Q04178 221 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W APC4Q04601 652 aa3.73□□□□□ -1.81
ECM16YMR128W GSH2Q08220 491 aa3.73□□□□□ -1.81
ECM16YMR128W ALG6Q12001 544 aaKnown RBP3.73□□□□□ -1.81
ECM16YMR128W MLH3Q12083 715 aa3.73□□□□□ -1.81
ECM16YMR128W MED2Q12124 431 aa3.73□□□□□ -1.81
ECM16YMR128W NSL1Q12143 216 aa3.73□□□□□ -1.81
ECM16YMR128W PFK27Q12471 397 aaPredicted RBP3.73□□□□□ -1.81
ECM16YMR128W CTT1P06115 562 aa3.72□□□□□ -1.81
ECM16YMR128W CDC31P06704 161 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W SEC53P07283 254 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W SPS1P08458 490 aa3.72□□□□□ -1.81
ECM16YMR128W PHO3P24031 467 aa3.72□□□□□ -1.81
ECM16YMR128W DBR1P24309 405 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W ARP2P32381 391 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W SSE2P32590 693 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W YBR241CP38142 488 aa3.72□□□□□ -1.81
ECM16YMR128W HSV2P50079 448 aaPredicted RBP3.72□□□□□ -1.81
ECM16YMR128W KEL2P50090 882 aa3.72□□□□□ -1.81
ECM16YMR128W DIA3P52290 468 aa3.72□□□□□ -1.81
ECM16YMR128W MET13P53128 600 aa3.72□□□□□ -1.81
ECM16YMR128W PRP38Q00723 242 aaPredicted RBP3.72□□□□□ -1.81
ECM16YMR128W REG1Q00816 1014 aa3.72□□□□□ -1.81
ECM16YMR128W CIA1Q05583 330 aa3.72□□□□□ -1.81
ECM16YMR128W GPB1Q08886 897 aa3.72□□□□□ -1.81
ECM16YMR128W SCM3Q12334 223 aa3.72□□□□□ -1.81
ECM16YMR128W RPP2BP02400 110 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W CMK2P22517 447 aa3.72□□□□□ -1.81
ECM16YMR128W YSP3P25036 478 aa3.72□□□□□ -1.81
ECM16YMR128W PPZ1P26570 692 aa3.72□□□□□ -1.81
ECM16YMR128W RIM1P32445 135 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W SMY2P32909 740 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W GDH2P33327 1092 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W SPC29P33419 253 aa3.72□□□□□ -1.81
ECM16YMR128W WHI3P34761 661 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W VPS21P36017 210 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W UTP30P36144 274 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W ECM13P38195 257 aa3.72□□□□□ -1.81
ECM16YMR128W MUP3P38734 546 aa3.72□□□□□ -1.81
ECM16YMR128W YHR078WP38799 552 aa3.72□□□□□ -1.81
ECM16YMR128W YHB1P39676 399 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W MIT1P40002 666 aa3.72□□□□□ -1.81
ECM16YMR128W YJR054WP47114 497 aa3.72□□□□□ -1.81
ECM16YMR128W IMD3P50095 523 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W CLD1P53264 445 aa3.72□□□□□ -1.81
ECM16YMR128W ESF2P53743 316 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W CWC24P53769 259 aa3.72□□□□□ -1.81
ECM16YMR128W SLM2P53955 656 aa3.72□□□□□ -1.81
ECM16YMR128W TOF2Q02208 771 aa3.72□□□□□ -1.81
ECM16YMR128W CWC21Q03375 135 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W GOT1Q03554 138 aa3.72□□□□□ -1.81
ECM16YMR128W SKY1Q03656 742 aa3.72□□□□□ -1.81
ECM16YMR128W PEX12Q04370 399 aa3.72□□□□□ -1.81
ECM16YMR128W PUS7Q08647 676 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W BUD7Q08754 746 aa3.72□□□□□ -1.81
ECM16YMR128W DDC1Q08949 612 aa3.72□□□□□ -1.81
ECM16YMR128W NBP2Q12163 236 aa3.72□□□□□ -1.81
ECM16YMR128W YOR022CQ12204 715 aa3.72□□□□□ -1.81
ECM16YMR128W YLR126CQ12288 251 aa3.72□□□□□ -1.81
ECM16YMR128W YPL119C-AQ3E751 87 aa3.72□□□□□ -1.81
ECM16YMR128W DST1P07273 309 aa3.72□□□□□ -1.81
ECM16YMR128W KSS1P14681 368 aa3.72□□□□□ -1.81
ECM16YMR128W NMT1P14743 455 aa3.72□□□□□ -1.81
ECM16YMR128W CMP2P14747 604 aa3.72□□□□□ -1.81
ECM16YMR128W DMC1P25453 334 aa3.72□□□□□ -1.81
ECM16YMR128W EMC1P25574 760 aa3.72□□□□□ -1.81
ECM16YMR128W THI4P32318 326 aa3.72□□□□□ -1.81
ECM16YMR128W YBR053CP38235 358 aa3.72□□□□□ -1.81
ECM16YMR128W KSP1P38691 1029 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W HXT6P39003 570 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W HXT7P39004 570 aa3.72□□□□□ -1.81
ECM16YMR128W ERV46P39727 415 aa3.72□□□□□ -1.81
ECM16YMR128W TIS11P47977 285 aa3.72□□□□□ -1.81
ECM16YMR128W SLD3P53135 668 aa3.72□□□□□ -1.81
ECM16YMR128W DSL1P53847 754 aa3.72□□□□□ -1.81
ECM16YMR128W YPL062WQ02781 134 aa3.72□□□□□ -1.81
ECM16YMR128W RQC1Q05468 723 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W PEX10Q05568 337 aa3.72□□□□□ -1.81
ECM16YMR128W YHC1Q05900 231 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W SWC7Q06707 132 aa3.72□□□□□ -1.81
ECM16YMR128W RKM1Q08961 583 aaPredicted RBP3.72□□□□□ -1.81
ECM16YMR128W JLP1Q12358 412 aa3.72□□□□□ -1.81
ECM16YMR128W TY1A-NL1Q12391 440 aaKnown RBP3.72□□□□□ -1.81
ECM16YMR128W KIN2P13186 1147 aaKnown RBP3.71□□□□□ -1.81
ECM16YMR128W PEX34P25584 144 aa3.71□□□□□ -1.81
ECM16YMR128W YCR099CP25657 155 aa3.71□□□□□ -1.81
ECM16YMR128W PEX3P28795 441 aa3.71□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 200.6 ms