RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W FRT2P39734 528 aa3.77□□□□□ -1.81
USA1YML029W SUT1P53032 299 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W NPY1P53164 384 aa3.77□□□□□ -1.81
USA1YML029W GTR1Q00582 310 aa3.77□□□□□ -1.81
USA1YML029W MMT1Q03218 510 aa3.77□□□□□ -1.81
USA1YML029W ATG38Q05789 226 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W YLR030WQ07967 263 aa3.77□□□□□ -1.81
USA1YML029W PUS9Q12069 462 aa3.77□□□□□ -1.81
USA1YML029W DIN7Q12086 430 aa3.77□□□□□ -1.81
USA1YML029W RTK1Q12100 620 aaPredicted RBP3.77□□□□□ -1.81
USA1YML029W GET4Q12125 312 aa3.77□□□□□ -1.81
USA1YML029W NMD4Q12129 218 aa3.77□□□□□ -1.81
USA1YML029W YCL012CQ8J0M4 134 aa3.77□□□□□ -1.81
USA1YML029W ART10P18634 518 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W BUB3P26449 341 aa3.77□□□□□ -1.81
USA1YML029W PDB1P32473 366 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W SIP2P34164 415 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W PTH2P34222 208 aa3.77□□□□□ -1.81
USA1YML029W EAP1P36041 632 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W SOL2P37262 315 aa3.77□□□□□ -1.81
USA1YML029W YCR087C-AP37263 153 aa3.77□□□□□ -1.81
USA1YML029W ARA1P38115 344 aa3.77□□□□□ -1.81
USA1YML029W DED81P38707 554 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W UTP18P40362 594 aaPredicted RBP3.77□□□□□ -1.81
USA1YML029W PFA3P42836 336 aa3.77□□□□□ -1.81
USA1YML029W GCV1P48015 400 aa3.77□□□□□ -1.81
USA1YML029W MNN10P50108 393 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W IMA1P53051 589 aa3.77□□□□□ -1.81
USA1YML029W COS12P53053 380 aa3.77□□□□□ -1.81
USA1YML029W SNO2P53823 222 aa3.77□□□□□ -1.81
USA1YML029W LGE1Q02796 332 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W GIP3Q03016 1276 aa3.77□□□□□ -1.81
USA1YML029W SSQ1Q05931 657 aaPredicted RBP3.77□□□□□ -1.81
USA1YML029W IOC2Q12072 812 aa3.77□□□□□ -1.81
USA1YML029W GLO4Q12320 285 aa3.77□□□□□ -1.81
USA1YML029W BEM2P39960 2167 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W PHO5P00635 467 aa3.76□□□□□ -1.81
USA1YML029W CAR1P00812 333 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W CBS2P14905 389 aa3.76□□□□□ -1.81
USA1YML029W MLS1P30952 554 aa3.76□□□□□ -1.81
USA1YML029W NUP120P35729 1037 aa3.76□□□□□ -1.81
USA1YML029W CAF4P36130 643 aa3.76□□□□□ -1.81
USA1YML029W UTH1P36135 365 aa3.76□□□□□ -1.81
USA1YML029W BMT2P38278 337 aa3.76□□□□□ -1.81
USA1YML029W VMA13P41807 478 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W FKH2P41813 862 aa3.76□□□□□ -1.81
USA1YML029W LEM3P42838 414 aa3.76□□□□□ -1.81
USA1YML029W YJR030CP47101 745 aa3.76□□□□□ -1.81
USA1YML029W TIS11P47977 285 aa3.76□□□□□ -1.81
USA1YML029W NBP35P52920 328 aa3.76□□□□□ -1.81
USA1YML029W SUN4P53616 420 aa3.76□□□□□ -1.81
USA1YML029W CUS2P53830 285 aaPredicted RBP3.76□□□□□ -1.81
USA1YML029W NAN1Q02931 896 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W GAS3Q03655 524 aa3.76□□□□□ -1.81
USA1YML029W MTQ2Q03920 221 aaPredicted RBP3.76□□□□□ -1.81
USA1YML029W YML096WQ04489 525 aa3.76□□□□□ -1.81
USA1YML029W VID22Q05934 901 aa3.76□□□□□ -1.81
USA1YML029W YOR378WQ08902 515 aa3.76□□□□□ -1.81
USA1YML029W YOL107WQ12239 342 aa3.76□□□□□ -1.81
USA1YML029W RRP12Q12754 1228 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W GAL7P08431 366 aa3.76□□□□□ -1.81
USA1YML029W TY2A-LR1P0C2J4 438 aa3.76□□□□□ -1.81
USA1YML029W TY2A-FP0CX61 438 aa3.76□□□□□ -1.81
USA1YML029W TY2A-GR2P0CX62 438 aa3.76□□□□□ -1.81
USA1YML029W KAR1P11927 433 aa3.76□□□□□ -1.81
USA1YML029W MRP13P12686 339 aa3.76□□□□□ -1.81
USA1YML029W PRP6P19735 899 aaPredicted RBP3.76□□□□□ -1.81
USA1YML029W PTP1P25044 335 aa3.76□□□□□ -1.81
USA1YML029W SLM5P25345 492 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W TY2A-CP25383 438 aa3.76□□□□□ -1.81
USA1YML029W RAD14P28519 371 aa3.76□□□□□ -1.81
USA1YML029W THI4P32318 326 aa3.76□□□□□ -1.81
USA1YML029W LST4P34239 828 aa3.76□□□□□ -1.81
USA1YML029W UME6P39001 836 aa3.76□□□□□ -1.81
USA1YML029W BEM4P39011 633 aa3.76□□□□□ -1.81
USA1YML029W DHH1P39517 506 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W SCS2P40075 244 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W LSM5P40089 93 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W YER158CP40095 573 aa3.76□□□□□ -1.81
USA1YML029W YRB1P41920 201 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W YJR154WP47181 346 aa3.76□□□□□ -1.81
USA1YML029W USE1P53146 245 aa3.76□□□□□ -1.81
USA1YML029W NNF2P53253 936 aa3.76□□□□□ -1.81
USA1YML029W YNL010WP53981 241 aaKnown RBP3.76□□□□□ -1.81
USA1YML029W TY2A-DR2Q03483 438 aa3.76□□□□□ -1.81
USA1YML029W ROT1Q03691 256 aa3.76□□□□□ -1.81
USA1YML029W GTB1Q04924 702 aa3.76□□□□□ -1.81
USA1YML029W RIF2Q06208 395 aa3.76□□□□□ -1.81
USA1YML029W OSW1Q08692 278 aa3.76□□□□□ -1.81
USA1YML029W YLR125WQ12138 136 aa3.76□□□□□ -1.81
USA1YML029W TY2A-BQ12260 438 aa3.76□□□□□ -1.81
USA1YML029W TY2A-OR2Q12293 438 aa3.76□□□□□ -1.81
USA1YML029W TY2A-DR1Q12392 438 aa3.76□□□□□ -1.81
USA1YML029W TY2A-OR1Q12439 438 aa3.76□□□□□ -1.81
USA1YML029W TY2A-DR3Q99303 438 aa3.76□□□□□ -1.81
USA1YML029W PRE9P23638 258 aaKnown RBP3.75□□□□□ -1.81
USA1YML029W ATP11P32453 318 aa3.75□□□□□ -1.81
USA1YML029W PET309P32522 965 aaPredicted RBP3.75□□□□□ -1.81
USA1YML029W SFC1P33303 322 aa3.75□□□□□ -1.81
USA1YML029W DOM34P33309 386 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms