RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C SGF73P53165 657 aa3.36□□□□□ -1.87
VPS33YLR396C YNL247WP53852 767 aaKnown RBP3.36□□□□□ -1.87
VPS33YLR396C YML037CQ03703 340 aa3.36□□□□□ -1.87
VPS33YLR396C ARP10Q04549 284 aa3.36□□□□□ -1.87
VPS33YLR396C ADE13Q05911 482 aaKnown RBP3.36□□□□□ -1.87
VPS33YLR396C TSR1Q07381 788 aaKnown RBP3.36□□□□□ -1.87
VPS33YLR396C MED1Q12321 566 aa3.36□□□□□ -1.87
VPS33YLR396C SEC53P07283 254 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C MATALPHA2P0CY08 210 aa3.35□□□□□ -1.87
VPS33YLR396C HMLALPHA2P0CY09 210 aa3.35□□□□□ -1.87
VPS33YLR396C NAT1P12945 854 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C TAL1P15019 335 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C GAC1P28006 793 aa3.35□□□□□ -1.87
VPS33YLR396C SYN8P31377 255 aa3.35□□□□□ -1.87
VPS33YLR396C RME1P32338 300 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C NPL6P32832 435 aa3.35□□□□□ -1.87
VPS33YLR396C CCT6P39079 546 aa3.35□□□□□ -1.87
VPS33YLR396C AXL1P40851 1208 aa3.35□□□□□ -1.87
VPS33YLR396C VTC2P43585 828 aa3.35□□□□□ -1.87
VPS33YLR396C MDV1P47025 714 aa3.35□□□□□ -1.87
VPS33YLR396C FMS1P50264 508 aa3.35□□□□□ -1.87
VPS33YLR396C SHE4P51534 789 aa3.35□□□□□ -1.87
VPS33YLR396C ARP9Q05123 467 aa3.35□□□□□ -1.87
VPS33YLR396C ATG26Q06321 1198 aa3.35□□□□□ -1.87
VPS33YLR396C MCP2Q06567 569 aa3.35□□□□□ -1.87
VPS33YLR396C LEU9Q12166 604 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C GLE1Q12315 538 aa3.35□□□□□ -1.87
VPS33YLR396C OCA6Q12454 224 aa3.35□□□□□ -1.87
VPS33YLR396C RPL42AP0CX27 106 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C RPL42BP0CX28 106 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C KGD1P20967 1014 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C RAD57P25301 460 aa3.35□□□□□ -1.87
VPS33YLR396C YIH1P25637 258 aa3.35□□□□□ -1.87
VPS33YLR396C RPC19P28000 142 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C ATO2P32907 282 aa3.35□□□□□ -1.87
VPS33YLR396C CSE1P33307 960 aa3.35□□□□□ -1.87
VPS33YLR396C RIB7P33312 244 aa3.35□□□□□ -1.87
VPS33YLR396C HEK2P38199 381 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
VPS33YLR396C ANS1P38832 159 aa3.35□□□□□ -1.87
VPS33YLR396C YIL060WP40519 144 aa3.35□□□□□ -1.87
VPS33YLR396C RPS10BP46784 105 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C GLO1P50107 326 aa3.35□□□□□ -1.87
VPS33YLR396C LCL3P53153 274 aa3.35□□□□□ -1.87
VPS33YLR396C PIB2P53191 635 aa3.35□□□□□ -1.87
VPS33YLR396C ARE2P53629 642 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C EFM6P53970 246 aa3.35□□□□□ -1.87
VPS33YLR396C SPC24Q04477 213 aa3.35□□□□□ -1.87
VPS33YLR396C HCR1Q05775 265 aaKnown RBP3.35□□□□□ -1.87
VPS33YLR396C UTP21Q06078 939 aaPredicted RBP3.35□□□□□ -1.87
VPS33YLR396C RPS10AQ08745 105 aaPredicted RBP3.35□□□□□ -1.87
VPS33YLR396C HIF1Q12373 385 aa3.35□□□□□ -1.87
VPS33YLR396C TIF3P34167 436 aaKnown RBP3.34□□□□□ -1.87
VPS33YLR396C RPC37P36121 282 aa3.34□□□□□ -1.87
VPS33YLR396C LAS1P36146 502 aaPredicted RBP3.34□□□□□ -1.87
VPS33YLR396C YBR062CP38239 180 aa3.34□□□□□ -1.87
VPS33YLR396C EFM2P38347 419 aa3.34□□□□□ -1.87
VPS33YLR396C PCL6P40038 420 aa3.34□□□□□ -1.87
VPS33YLR396C SHQ1P40486 507 aaPredicted RBP3.34□□□□□ -1.87
VPS33YLR396C STB1P42845 420 aa3.34□□□□□ -1.87
VPS33YLR396C MRX6P48564 524 aa3.34□□□□□ -1.87
VPS33YLR396C RBL2P48606 106 aaKnown RBP3.34□□□□□ -1.87
VPS33YLR396C CTL1Q03220 320 aaKnown RBP3.34□□□□□ -1.87
VPS33YLR396C IZH1Q03419 316 aa3.34□□□□□ -1.87
VPS33YLR396C TAF9Q05027 157 aa3.34□□□□□ -1.87
VPS33YLR396C ECI1Q05871 280 aa3.34□□□□□ -1.87
VPS33YLR396C LUC7Q07508 261 aaPredicted RBP3.34□□□□□ -1.87
VPS33YLR396C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
VPS33YLR396C UBX3Q12229 455 aa3.34□□□□□ -1.87
VPS33YLR396C CBP1P07252 654 aa3.34□□□□□ -1.88
VPS33YLR396C MRP7P12687 371 aa3.34□□□□□ -1.88
VPS33YLR396C SPO12P17123 173 aa3.34□□□□□ -1.88
VPS33YLR396C PUP3P25451 205 aaKnown RBP3.34□□□□□ -1.88
VPS33YLR396C RPN2P32565 945 aaKnown RBP3.34□□□□□ -1.88
VPS33YLR396C YET1P35723 206 aa3.34□□□□□ -1.88
VPS33YLR396C YBR225WP38321 900 aa3.34□□□□□ -1.88
VPS33YLR396C UBA4P38820 440 aa3.34□□□□□ -1.88
VPS33YLR396C VRG4P40107 337 aa3.34□□□□□ -1.88
VPS33YLR396C YIL152WP40455 235 aa3.34□□□□□ -1.88
VPS33YLR396C YIR016WP40572 265 aa3.34□□□□□ -1.88
VPS33YLR396C PKP2P53170 491 aa3.34□□□□□ -1.88
VPS33YLR396C YPL068CQ02749 293 aa3.34□□□□□ -1.88
VPS33YLR396C PLP1Q04004 230 aa3.34□□□□□ -1.88
VPS33YLR396C BUD22Q04347 519 aaKnown RBP3.34□□□□□ -1.88
VPS33YLR396C EMI2Q04409 500 aaKnown RBP3.34□□□□□ -1.88
VPS33YLR396C DPB4Q04603 196 aaKnown RBP3.34□□□□□ -1.88
VPS33YLR396C YEH1Q07804 573 aa3.34□□□□□ -1.88
VPS33YLR396C ICT1Q12385 394 aa3.34□□□□□ -1.88
VPS33YLR396C NCB2Q92317 146 aa3.34□□□□□ -1.88
VPS33YLR396C UTP10P42945 1769 aaKnown RBP3.33□□□□□ -1.88
VPS33YLR396C YFL068WP0CX99 160 aa3.33□□□□□ -1.88
VPS33YLR396C YLL066W-AP0CY00 160 aa3.33□□□□□ -1.88
VPS33YLR396C YLL067W-AP0CY01 160 aa3.33□□□□□ -1.88
VPS33YLR396C SRB4P32569 687 aa3.33□□□□□ -1.88
VPS33YLR396C TMT1P32643 299 aa3.33□□□□□ -1.88
VPS33YLR396C TOA1P32773 286 aa3.33□□□□□ -1.88
VPS33YLR396C STV1P37296 890 aa3.33□□□□□ -1.88
VPS33YLR396C SIP3P38717 1229 aa3.33□□□□□ -1.88
VPS33YLR396C PHO90P39535 881 aa3.33□□□□□ -1.88
VPS33YLR396C FAR3P46671 204 aa3.33□□□□□ -1.88
VPS33YLR396C ERG26P53199 349 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms