RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX21	YGR239C	HIP1	P06775	603 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	RPS2	P25443	254 aa	Known RBP	4.13	□□□□□ -1.75
PEX21	YGR239C	BEM1	P29366	551 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	ATF1	P40353	525 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	FET5	P43561	622 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	YJR154W	P47181	346 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	DRN1	P53255	507 aa	Known RBP	4.13	□□□□□ -1.75
PEX21	YGR239C	STP1	Q00947	519 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	SKO1	Q02100	647 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	ACL4	Q03771	387 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	IVY1	Q04934	453 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	GLO2	Q05584	274 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	ECI1	Q05871	280 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	NRT1	Q08485	598 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	YOR365C	Q08844	703 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	YLR278C	Q05854	1341 aa		4.13	□□□□□ -1.75
PEX21	YGR239C	LPD1	P09624	499 aa	Known RBP	4.12	□□□□□ -1.75
PEX21	YGR239C	ATP10	P18496	279 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	CLN1	P20437	546 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	SGV1	P23293	657 aa	Known RBP	4.12	□□□□□ -1.75
PEX21	YGR239C	PTP1	P25044	335 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	GID7	P25569	745 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	REC114	P32841	428 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	SYG1	P40528	902 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	IAH1	P41734	238 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	VMA13	P41807	478 aa	Known RBP	4.12	□□□□□ -1.75
PEX21	YGR239C	RPS0B	P46654	252 aa	Known RBP	4.12	□□□□□ -1.75
PEX21	YGR239C	ATP22	P50273	684 aa	Predicted RBP	4.12	□□□□□ -1.75
PEX21	YGR239C	SLG1	P54867	378 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	RHO4	Q00246	291 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	DCS1	Q06151	350 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	MMR1	Q06324	491 aa		4.12	□□□□□ -1.75
PEX21	YGR239C	RPN5	Q12250	445 aa	Known RBP	4.12	□□□□□ -1.75
PEX21	YGR239C	TY1B-A	O13527	1196 aa	Known RBP	4.11	□□□□□ -1.75
PEX21	YGR239C	GPH1	P06738	902 aa	Known RBP	4.11	□□□□□ -1.75
PEX21	YGR239C	RRP7	P25368	297 aa	Predicted RBP	4.11	□□□□□ -1.75
PEX21	YGR239C	MGR1	P25573	417 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	ATP11	P32453	318 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	LTV1	P34078	463 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	YPK3	P38070	525 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	DUG2	P38149	878 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	LEU5	P38702	357 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	RTS2	P40962	232 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	ALT2	P52892	507 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	YGL082W	P53155	381 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	ESBP6	P53918	673 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	OCA2	P53949	197 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	RSF1	Q05043	376 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	COQ11	Q05892	277 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	PHO92	Q06390	306 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	ATX2	Q12067	313 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	AEP3	Q12089	606 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	BSC1	Q12140	328 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	NDJ1	Q12366	352 aa		4.11	□□□□□ -1.75
PEX21	YGR239C	PDE2	P06776	526 aa		4.1	□□□□□ -1.75
PEX21	YGR239C	SPO7	P18410	259 aa		4.1	□□□□□ -1.75
PEX21	YGR239C	HIR2	P32480	875 aa		4.1	□□□□□ -1.75
PEX21	YGR239C	YNK1	P36010	153 aa	Known RBP	4.1	□□□□□ -1.75
PEX21	YGR239C	RRP3	P38712	501 aa	Known RBP	4.1	□□□□□ -1.75
PEX21	YGR239C	FAD1	P38913	306 aa		4.1	□□□□□ -1.75
PEX21	YGR239C	SER3	P40054	469 aa		4.1	□□□□□ -1.75
PEX21	YGR239C	YGR016W	P53209	190 aa		4.1	□□□□□ -1.75
PEX21	YGR239C	BTN2	P53286	410 aa		4.1	□□□□□ -1.75
PEX21	YGR239C	RPL15B	P54780	204 aa	Predicted RBP	4.1	□□□□□ -1.75
PEX21	YGR239C	MSS11	Q03825	758 aa		4.1	□□□□□ -1.75
PEX21	YGR239C	SMF3	Q12078	473 aa	Predicted RBP	4.1	□□□□□ -1.75
PEX21	YGR239C	FRE6	Q12473	712 aa		4.1	□□□□□ -1.75
PEX21	YGR239C	LEU4	P06208	619 aa	Known RBP	4.09	□□□□□ -1.75
PEX21	YGR239C	SEC62	P21825	274 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	SNT1	P25357	1226 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	RHB1	P25378	209 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	PPZ1	P26570	692 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	FUN19	P28003	413 aa	Predicted RBP	4.09	□□□□□ -1.75
PEX21	YGR239C	GND1	P38720	489 aa	Known RBP	4.09	□□□□□ -1.75
PEX21	YGR239C	AZF1	P41696	914 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	YJL132W	P47014	750 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	GPI1	P53306	609 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	DSL1	P53847	754 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	TDA7	P53882	636 aa	Predicted RBP	4.09	□□□□□ -1.75
PEX21	YGR239C	BET4	Q00618	327 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	MRPL1	Q04599	285 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	YDR286C	Q05530	114 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PEX21	YGR239C	MED2	Q12124	431 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	HSP42	Q12329	375 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	ARP6	Q12509	438 aa		4.09	□□□□□ -1.75
PEX21	YGR239C	YER190C-B	P0CX94	160 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	YEL077W-A	P0CX95	160 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	YGR296C-B	P0CX96	160 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	YPL283W-B	P0CX97	160 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	YPR204C-A	P0CX98	160 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	RPI1	P23250	407 aa	Known RBP	4.08	□□□□□ -1.76
PEX21	YGR239C	MIC60	P36112	540 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	PIM1	P36775	1133 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	CAJ1	P39101	391 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	RIP-Chip
PEX21	YGR239C	MDV1	P47025	714 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	SEC5	P89102	971 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	SMA1	Q02651	245 aa		4.08	□□□□□ -1.76
PEX21	YGR239C	APL5	Q08951	932 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms