RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W FMP42Q04991 504 aa1.2□□□□□ -2.22
SMC1YFL008W YLR281CQ05863 155 aa1.2□□□□□ -2.22
SMC1YFL008W MRD1Q06106 887 aaKnown RBP1.2□□□□□ -2.22
SMC1YFL008W MRPL35Q06678 367 aa1.2□□□□□ -2.22
SMC1YFL008W AGA1P32323 725 aa1.2□□□□□ -2.22
SMC1YFL008W ERG3P32353 365 aa1.2□□□□□ -2.22
SMC1YFL008W SIP1P32578 815 aa1.2□□□□□ -2.22
SMC1YFL008W SAC6P32599 642 aaKnown RBP1.2□□□□□ -2.22
SMC1YFL008W YKL100CP34248 587 aa1.2□□□□□ -2.22
SMC1YFL008W CSM2P40465 213 aa1.2□□□□□ -2.22
SMC1YFL008W RTT101P47050 842 aa1.2□□□□□ -2.22
SMC1YFL008W YNL181WP53878 407 aa1.2□□□□□ -2.22
SMC1YFL008W UTP21Q06078 939 aaPredicted RBP1.2□□□□□ -2.22
SMC1YFL008W CTF3Q12748 733 aa1.2□□□□□ -2.22
SMC1YFL008W RTP1Q12751 981 aa1.2□□□□□ -2.22
SMC1YFL008W YCL021W-AQ96VH3 125 aa1.2□□□□□ -2.22
SMC1YFL008W YBR056W-AI2HB52 66 aa1.19□□□□□ -2.22
SMC1YFL008W ILV2P07342 687 aaKnown RBP1.19□□□□□ -2.22
SMC1YFL008W MTC4P38335 694 aaKnown RBP1.19□□□□□ -2.22
SMC1YFL008W RPH1P39956 796 aa1.19□□□□□ -2.22
SMC1YFL008W IAH1P41734 238 aa1.19□□□□□ -2.22
SMC1YFL008W UBX6P47049 396 aa1.19□□□□□ -2.22
SMC1YFL008W IST1P53843 298 aaPredicted RBP1.19□□□□□ -2.22
SMC1YFL008W RPA49Q01080 415 aaPredicted RBP1.19□□□□□ -2.22
SMC1YFL008W PFA5Q03289 374 aa1.19□□□□□ -2.22
SMC1YFL008W RLM1Q12224 676 aa1.19□□□□□ -2.22
SMC1YFL008W MCK1P21965 375 aaKnown RBP1.19□□□□□ -2.22
SMC1YFL008W YME1P32795 747 aa1.19□□□□□ -2.22
SMC1YFL008W YBR144CP34215 104 aa1.19□□□□□ -2.22
SMC1YFL008W LCL3P53153 274 aa1.19□□□□□ -2.22
SMC1YFL008W HEF3P53978 1044 aaKnown RBP1.19□□□□□ -2.22
SMC1YFL008W TPK1P06244 397 aa1.19□□□□□ -2.22
SMC1YFL008W YCR007CP25354 239 aa1.19□□□□□ -2.22
SMC1YFL008W RER1P25560 188 aa1.19□□□□□ -2.22
SMC1YFL008W SPC110P32380 944 aa1.19□□□□□ -2.22
SMC1YFL008W RPN2P32565 945 aaKnown RBP1.19□□□□□ -2.22
SMC1YFL008W MRX1P40050 688 aa1.19□□□□□ -2.22
SMC1YFL008W FAU1P40099 211 aa1.19□□□□□ -2.22
SMC1YFL008W REE1P40893 198 aa1.19□□□□□ -2.22
SMC1YFL008W CBK1P53894 756 aa1.19□□□□□ -2.22
SMC1YFL008W YDR131CQ03899 556 aa1.19□□□□□ -2.22
SMC1YFL008W ORM2Q06144 216 aa1.19□□□□□ -2.22
SMC1YFL008W TEN1Q07921 160 aa1.19□□□□□ -2.22
SMC1YFL008W NYV1Q12255 253 aa1.19□□□□□ -2.22
SMC1YFL008W COX3P00420 269 aa1.18□□□□□ -2.22
SMC1YFL008W TCD2P36101 447 aaKnown RBP1.18□□□□□ -2.22
SMC1YFL008W LYS14P40971 790 aa1.18□□□□□ -2.22
SMC1YFL008W DIM1P41819 318 aaKnown RBP1.18□□□□□ -2.22
SMC1YFL008W SSU1P41930 458 aa1.18□□□□□ -2.22
SMC1YFL008W RPS7BP48164 190 aaKnown RBP1.18□□□□□ -2.22
SMC1YFL008W UBP8P50102 471 aa1.18□□□□□ -2.22
SMC1YFL008W RSM23Q01163 450 aa1.18□□□□□ -2.22
SMC1YFL008W VPS38Q05919 439 aa1.18□□□□□ -2.22
SMC1YFL008W FMP45Q07651 309 aa1.18□□□□□ -2.22
SMC1YFL008W GRC3Q07845 632 aa1.18□□□□□ -2.22
SMC1YFL008W YOR389WQ08912 624 aa1.18□□□□□ -2.22
SMC1YFL008W CFT2Q12102 859 aaPredicted RBP1.18□□□□□ -2.22
SMC1YFL008W RMD5Q12508 421 aa1.18□□□□□ -2.22
SMC1YFL008W HSC82P15108 705 aaKnown RBP1.18□□□□□ -2.22
SMC1YFL008W YIL161WP40449 235 aaKnown RBP1.18□□□□□ -2.22
SMC1YFL008W ESL1P40456 1118 aa1.18□□□□□ -2.22
SMC1YFL008W YFR016CP43597 1233 aaKnown RBP1.18□□□□□ -2.22
SMC1YFL008W MSS11Q03825 758 aa1.18□□□□□ -2.22
SMC1YFL008W OPY2Q06810 360 aa1.18□□□□□ -2.22
SMC1YFL008W YLL056CQ12177 298 aa1.18□□□□□ -2.22
SMC1YFL008W HSH49Q99181 213 aaPredicted RBP1.18□□□□□ -2.22
SMC1YFL008W PEP5P12868 1029 aa1.18□□□□□ -2.22
SMC1YFL008W APE1P14904 514 aa1.18□□□□□ -2.22
SMC1YFL008W POL4P25615 582 aa1.18□□□□□ -2.22
SMC1YFL008W BUB3P26449 341 aa1.18□□□□□ -2.22
SMC1YFL008W GPI10P30777 616 aa1.18□□□□□ -2.22
SMC1YFL008W HXT1P32465 570 aa1.18□□□□□ -2.22
SMC1YFL008W SOF1P33750 489 aaKnown RBP1.18□□□□□ -2.22
SMC1YFL008W EBP2P36049 427 aaKnown RBP1.18□□□□□ -2.22
SMC1YFL008W THI2P38141 450 aa1.18□□□□□ -2.22
SMC1YFL008W SRO77P38163 1010 aa1.18□□□□□ -2.22
SMC1YFL008W MET18P40469 1032 aa1.18□□□□□ -2.22
SMC1YFL008W AZF1P41696 914 aa1.18□□□□□ -2.22
SMC1YFL008W SMC3P47037 1230 aa1.18□□□□□ -2.22
SMC1YFL008W AHC1Q12433 566 aa1.18□□□□□ -2.22
SMC1YFL008W ARP6Q12509 438 aa1.18□□□□□ -2.22
SMC1YFL008W TOM1Q03280 3268 aa1.18□□□□□ -2.22
SMC1YFL008W YBR085C-AO43137 85 aa1.17□□□□□ -2.22
SMC1YFL008W PHO81P17442 1178 aa1.17□□□□□ -2.22
SMC1YFL008W GLK1P17709 500 aaKnown RBP1.17□□□□□ -2.22
SMC1YFL008W SGF29P25554 259 aa1.17□□□□□ -2.22
SMC1YFL008W TFC3P34111 1160 aa1.17□□□□□ -2.22
SMC1YFL008W YTA12P40341 825 aa1.17□□□□□ -2.22
SMC1YFL008W SPO22P40511 975 aa1.17□□□□□ -2.22
SMC1YFL008W ROK1P45818 564 aaPredicted RBP1.17□□□□□ -2.22
SMC1YFL008W BSC5P53755 489 aa1.17□□□□□ -2.22
SMC1YFL008W PHO92Q06390 306 aa1.17□□□□□ -2.22
SMC1YFL008W CTI6Q08923 506 aa1.17□□□□□ -2.22
SMC1YFL008W YDL009CQ12210 107 aa1.17□□□□□ -2.22
SMC1YFL008W SOD1P00445 154 aaKnown RBP1.17□□□□□ -2.22
SMC1YFL008W RPS8AP0CX39 200 aaKnown RBP1.17□□□□□ -2.22
SMC1YFL008W RPS8BP0CX40 200 aaKnown RBP1.17□□□□□ -2.22
SMC1YFL008W ROX1P25042 368 aa1.17□□□□□ -2.22
SMC1YFL008W ADH7P25377 361 aa1.17□□□□□ -2.22
SMC1YFL008W SNC1P31109 117 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms