RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	DRS2	P39524	1355 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	RAV1	P47104	1357 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	ARG81	P05085	880 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	GPA1	P08539	472 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	APE1	P14904	514 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	KRS1	P15180	591 aa	Known RBP	5.85	□□□□□ -1.47
TRP1	YDR007W	BUD5	P25300	642 aa	Predicted RBP	5.85	□□□□□ -1.47
TRP1	YDR007W	TFB1	P32776	642 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	MDL1	P33310	695 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	YKL100C	P34248	587 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	OCT1	P35999	772 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	HEL1	P36113	551 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	LSG1	P53145	640 aa	Known RBP	5.85	□□□□□ -1.47
TRP1	YDR007W	YGL082W	P53155	381 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	VPS20	Q04272	221 aa		5.85	□□□□□ -1.47
TRP1	YDR007W	RUD3	Q12234	484 aa	Known RBP	5.85	□□□□□ -1.47
TRP1	YDR007W	PSK1	P31374	1356 aa		5.84	□□□□□ -1.47
TRP1	YDR007W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
TRP1	YDR007W	BUD14	P27637	709 aa		5.84	□□□□□ -1.47
TRP1	YDR007W	HCS1	P34243	683 aa		5.84	□□□□□ -1.47
TRP1	YDR007W	PXL1	P36166	706 aa		5.84	□□□□□ -1.47
TRP1	YDR007W	LIN1	P38852	340 aa	Predicted RBP	5.84	□□□□□ -1.47
TRP1	YDR007W	SHC1	P39000	512 aa		5.84	□□□□□ -1.47
TRP1	YDR007W	GDI1	P39958	451 aa	Known RBP	5.84	□□□□□ -1.47
TRP1	YDR007W	YTP1	P53584	459 aa		5.84	□□□□□ -1.47
TRP1	YDR007W	RSM23	Q01163	450 aa		5.84	□□□□□ -1.47
TRP1	YDR007W	RBS1	Q05672	457 aa	Known RBP	5.84	□□□□□ -1.47
TRP1	YDR007W	TPO3	Q06451	622 aa		5.84	□□□□□ -1.47
TRP1	YDR007W	ISN1	Q99312	450 aa		5.84	□□□□□ -1.47
TRP1	YDR007W	PDR11	P40550	1411 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	KRE5	P22023	1365 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	NAT1	P12945	854 aa	Known RBP	5.83	□□□□□ -1.48
TRP1	YDR007W	TAL1	P15019	335 aa	Known RBP	5.83	□□□□□ -1.48
TRP1	YDR007W	CPR2	P23285	205 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	ADY2	P25613	283 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	ERV1	P27882	189 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	HXT3	P32466	567 aa	Known RBP	5.83	□□□□□ -1.48
TRP1	YDR007W	KAR9	P32526	644 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	RAD5	P32849	1169 aa	Predicted RBP	5.83	□□□□□ -1.48
TRP1	YDR007W	ARN1	P38731	627 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	CAF130	P53280	1122 aa	Predicted RBP	5.83	□□□□□ -1.48
TRP1	YDR007W	MAL13	P53338	473 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	DSL1	P53847	754 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	OAZ1	Q02803	292 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	KAP120	Q02932	1032 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	KRE28	Q04431	385 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	STE23	Q06010	1027 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	PIG1	Q06216	648 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	FMP45	Q07651	309 aa		5.83	□□□□□ -1.48
TRP1	YDR007W	RPS10A	Q08745	105 aa	Predicted RBP	5.83	□□□□□ -1.48
TRP1	YDR007W	PDH1	Q12428	516 aa	Known RBP	5.83	□□□□□ -1.48
TRP1	YDR007W	PAR32	Q12515	295 aa	Known RBP	5.83	□□□□□ -1.48
TRP1	YDR007W	CLB2	P24869	491 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	YEL043W	P32618	956 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	MIA40	P36046	403 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	RXT2	P38255	430 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	YSW1	P38280	609 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	RTR1	P40084	226 aa	Predicted RBP	5.82	□□□□□ -1.48
TRP1	YDR007W	LCB2	P40970	561 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	SEC27	P41811	889 aa	Known RBP	5.82	□□□□□ -1.48
TRP1	YDR007W	YJL107C	P42947	387 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	TAX4	P47030	604 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	MSC1	Q03104	513 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	RBA50	Q04418	439 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	SOV1	Q04748	898 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	COQ9	Q05779	260 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	YLR111W	Q12528	110 aa		5.82	□□□□□ -1.48
TRP1	YDR007W	RPL31B	P0C2H9	113 aa	Known RBP	5.81	□□□□□ -1.48
TRP1	YDR007W	YMR085W	P0CF18	432 aa		5.81	□□□□□ -1.48
TRP1	YDR007W	PMR1	P13586	950 aa		5.81	□□□□□ -1.48
TRP1	YDR007W	RPO26	P20435	155 aa		5.81	□□□□□ -1.48
TRP1	YDR007W	RPN2	P32565	945 aa	Known RBP	5.81	□□□□□ -1.48
TRP1	YDR007W	HOT13	P36078	116 aa		5.81	□□□□□ -1.48
TRP1	YDR007W	CCT4	P39078	528 aa	Known RBP	5.81	□□□□□ -1.48
TRP1	YDR007W	QRI1	P43123	477 aa	Known RBP	5.81	□□□□□ -1.48
TRP1	YDR007W	GCN20	P43535	752 aa	Known RBP	5.81	□□□□□ -1.48
TRP1	YDR007W	RPS10B	P46784	105 aa	Known RBP	5.81	□□□□□ -1.48
TRP1	YDR007W	YJL055W	P47044	245 aa		5.81	□□□□□ -1.48
TRP1	YDR007W	YGR126W	P53274	230 aa		5.81	□□□□□ -1.48
TRP1	YDR007W	TOF2	Q02208	771 aa		5.81	□□□□□ -1.48
TRP1	YDR007W	FAR8	Q05040	523 aa		5.81	□□□□□ -1.48
TRP1	YDR007W	ATG26	Q06321	1198 aa		5.81	□□□□□ -1.48
TRP1	YDR007W	BRR1	Q99177	341 aa	Predicted RBP	5.81	□□□□□ -1.48
TRP1	YDR007W	MLP1	Q02455	1875 aa	Known RBP	5.8	□□□□□ -1.48
TRP1	YDR007W	DOP1	Q03921	1698 aa		5.8	□□□□□ -1.48
TRP1	YDR007W	PUT2	P07275	575 aa		5.8	□□□□□ -1.48
TRP1	YDR007W	PRP16	P15938	1071 aa	Predicted RBP	5.8	□□□□□ -1.48
TRP1	YDR007W	PPH22	P23595	377 aa		5.8	□□□□□ -1.48
TRP1	YDR007W	ELO2	P25358	347 aa		5.8	□□□□□ -1.48
TRP1	YDR007W	GAC1	P28006	793 aa		5.8	□□□□□ -1.48
TRP1	YDR007W	DPH2	P32461	534 aa		5.8	□□□□□ -1.48
TRP1	YDR007W	RML2	P32611	393 aa		5.8	□□□□□ -1.48
TRP1	YDR007W	MTR2	P34232	184 aa	Known RBP	5.8	□□□□□ -1.48
TRP1	YDR007W	TFG2	P41896	400 aa	Predicted RBP	5.8	□□□□□ -1.48
TRP1	YDR007W	CAK1	P43568	368 aa	Predicted RBP	5.8	□□□□□ -1.48
TRP1	YDR007W	IRC7	P43623	340 aa		5.8	□□□□□ -1.48
TRP1	YDR007W	BPL1	P48445	690 aa	Predicted RBP	5.8	□□□□□ -1.48
TRP1	YDR007W	LYS20	P48570	428 aa	Known RBP	5.8	□□□□□ -1.48
TRP1	YDR007W	UBP8	P50102	471 aa		5.8	□□□□□ -1.48
TRP1	YDR007W	SWF1	Q04629	336 aa		5.8	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms