RNA–Protein interactions for RNA: YDL001W

RMD1, Transcript of Cytoplasmic protein required for sporulation, yeast

Gene RMD1, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RMD1	YDL001W	ECI1	Q05871	280 aa		4.76	□□□□□ -1.65
RMD1	YDL001W	RPS24A	P0CX31	135 aa	Known RBP	4.75	□□□□□ -1.65
RMD1	YDL001W	RPS24B	P0CX32	135 aa	Known RBP	4.75	□□□□□ -1.65
RMD1	YDL001W	AIM17	P23180	465 aa	Known RBP	4.75	□□□□□ -1.65
RMD1	YDL001W	MCM4	P30665	933 aa	Known RBP	4.75	□□□□□ -1.65
RMD1	YDL001W	VMA8	P32610	256 aa	Known RBP	4.75	□□□□□ -1.65
RMD1	YDL001W	PHO90	P39535	881 aa		4.75	□□□□□ -1.65
RMD1	YDL001W	AIM22	P47051	409 aa		4.75	□□□□□ -1.65
RMD1	YDL001W	YPL014W	Q02606	381 aa		4.75	□□□□□ -1.65
RMD1	YDL001W	NUP100	Q02629	959 aa		4.75	□□□□□ -1.65
RMD1	YDL001W	SHR3	Q02774	210 aa		4.75	□□□□□ -1.65
RMD1	YDL001W	SSK1	Q07084	712 aa		4.75	□□□□□ -1.65
RMD1	YDL001W	THP1	Q08231	455 aa		4.75	□□□□□ -1.65
RMD1	YDL001W	SHP1	P34223	423 aa		4.74	□□□□□ -1.65
RMD1	YDL001W	PXA2	P34230	853 aa		4.74	□□□□□ -1.65
RMD1	YDL001W	LAG1	P38703	411 aa		4.74	□□□□□ -1.65
RMD1	YDL001W	GND1	P38720	489 aa	Known RBP	4.74	□□□□□ -1.65
RMD1	YDL001W	ALK1	P43633	760 aa	Known RBP	4.74	□□□□□ -1.65
RMD1	YDL001W	MNP1	P53163	194 aa	Predicted RBP	4.74	□□□□□ -1.65
RMD1	YDL001W	RSC1	P53236	928 aa		4.74	□□□□□ -1.65
RMD1	YDL001W	BUD32	P53323	261 aa		4.74	□□□□□ -1.65
RMD1	YDL001W	YNL181W	P53878	407 aa		4.74	□□□□□ -1.65
RMD1	YDL001W	MRPL1	Q04599	285 aa		4.74	□□□□□ -1.65
RMD1	YDL001W	ISA2	Q12425	185 aa		4.74	□□□□□ -1.65
RMD1	YDL001W	YRF1-3	P0CX14	1859 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	YRF1-7	P0CX15	1859 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	YRF1-6	P53819	1859 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	COR1	P07256	457 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	PEP4	P07267	405 aa	Known RBP	4.73	□□□□□ -1.65
RMD1	YDL001W	RPL31B	P0C2H9	113 aa	Known RBP	4.73	□□□□□ -1.65
RMD1	YDL001W	HOM3	P10869	527 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	PEP5	P12868	1029 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	REC107	P21651	314 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	SEC66	P33754	206 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	YPK3	P38070	525 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	SRP72	P38688	640 aa	Known RBP	4.73	□□□□□ -1.65
RMD1	YDL001W	MDV1	P47025	714 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	ESBP6	P53918	673 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	RPA49	Q01080	415 aa	Predicted RBP	4.73	□□□□□ -1.65
RMD1	YDL001W	RMT2	Q03305	412 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	BUG1	Q12191	341 aa		4.73	□□□□□ -1.65
RMD1	YDL001W	NCE102	Q12207	173 aa	RIP-Chip data	4.73	□□□□□ -1.65	not detected
RMD1	YDL001W	PPH22	P23595	377 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	YCP4	P25349	247 aa	Known RBP	4.72	□□□□□ -1.65
RMD1	YDL001W	GID7	P25569	745 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	SNC1	P31109	117 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	STB6	P36085	766 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	PHD1	P36093	366 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	BNA4	P38169	460 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	YHR210C	P38893	341 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	YJL068C	P40363	299 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	IAH1	P41734	238 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	DLD2	P46681	530 aa	Known RBP	4.72	□□□□□ -1.65
RMD1	YDL001W	RBS1	Q05672	457 aa	Known RBP	4.72	□□□□□ -1.65
RMD1	YDL001W	SMC6	Q12749	1114 aa		4.72	□□□□□ -1.65
RMD1	YDL001W	PRP2	P20095	876 aa	Predicted RBP	4.71	□□□□□ -1.66
RMD1	YDL001W	YCR051W	P25631	222 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	ADK2	P26364	225 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	BUD14	P27637	709 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	MGM1	P32266	881 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	HXT3	P32466	567 aa	Known RBP	4.71	□□□□□ -1.66
RMD1	YDL001W	GCS1	P35197	352 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	ERG7	P38604	731 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	MBB1	P39534	108 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	PCI8	P40512	444 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	RTS2	P40962	232 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	ARX1	Q03862	593 aa	Known RBP	4.71	□□□□□ -1.66
RMD1	YDL001W	YDR131C	Q03899	556 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	YDR415C	Q04033	374 aa	Predicted RBP	4.71	□□□□□ -1.66
RMD1	YDL001W	DIC1	Q06143	298 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	VTA1	Q06263	330 aa		4.71	□□□□□ -1.66
RMD1	YDL001W	RAD52	P06778	471 aa	Known RBP	4.7	□□□□□ -1.66
RMD1	YDL001W	RPS2	P25443	254 aa	Known RBP	4.7	□□□□□ -1.66
RMD1	YDL001W	MGR1	P25573	417 aa		4.7	□□□□□ -1.66
RMD1	YDL001W	TIF4631	P39935	952 aa	Known RBP	4.7	□□□□□ -1.66
RMD1	YDL001W	PCL6	P40038	420 aa		4.7	□□□□□ -1.66
RMD1	YDL001W	ATG27	P46989	271 aa		4.7	□□□□□ -1.66
RMD1	YDL001W	ZPR1	P53303	486 aa	Known RBP	4.7	□□□□□ -1.66
RMD1	YDL001W	SCW4	P53334	386 aa	Known RBP	4.7	□□□□□ -1.66
RMD1	YDL001W	BNI5	P53890	448 aa	Known RBP	4.7	□□□□□ -1.66
RMD1	YDL001W	HEF3	P53978	1044 aa	Known RBP	4.7	□□□□□ -1.66
RMD1	YDL001W	BET4	Q00618	327 aa		4.7	□□□□□ -1.66
RMD1	YDL001W	ERB1	Q04660	807 aa	Known RBP	4.7	□□□□□ -1.66
RMD1	YDL001W	BSC1	Q12140	328 aa		4.7	□□□□□ -1.66
RMD1	YDL001W	AFI1	Q99222	893 aa		4.7	□□□□□ -1.66
RMD1	YDL001W	SGV1	P23293	657 aa	Known RBP	4.69	□□□□□ -1.66
RMD1	YDL001W	SPB1	P25582	841 aa	Predicted RBP	4.69	□□□□□ -1.66
RMD1	YDL001W	AFG1	P32317	509 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	HCS1	P34243	683 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	ASK1	P35734	292 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	TCM62	P38228	572 aa	Known RBP	4.69	□□□□□ -1.66
RMD1	YDL001W	SPC97	P38863	823 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	FET5	P43561	622 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	YGL108C	P53139	140 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	DRN1	P53255	507 aa	Known RBP	4.69	□□□□□ -1.66
RMD1	YDL001W	RHO4	Q00246	291 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	ROY1	Q04847	553 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	FMP45	Q07651	309 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	DSE3	Q08729	430 aa		4.69	□□□□□ -1.66
RMD1	YDL001W	YOR365C	Q08844	703 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms