RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C SGN1P40561 250 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
PDB1YBR221C YJL107CP42947 387 aa5.54□□□□□ -1.52
PDB1YBR221C LSB6P42951 607 aa5.54□□□□□ -1.52
PDB1YBR221C BNA6P43619 295 aa5.54□□□□□ -1.52
PDB1YBR221C YJL132WP47014 750 aa5.54□□□□□ -1.52
PDB1YBR221C YHC3P47040 408 aa5.54□□□□□ -1.52
PDB1YBR221C PET130P47065 347 aa5.54□□□□□ -1.52
PDB1YBR221C INP52P50942 1183 aa5.54□□□□□ -1.52
PDB1YBR221C YGL185CP53100 379 aa5.54□□□□□ -1.52
PDB1YBR221C YNR040WP53736 256 aa5.54□□□□□ -1.52
PDB1YBR221C BIO5P53744 561 aaKnown RBP5.54□□□□□ -1.52
PDB1YBR221C URH1Q04179 340 aa5.54□□□□□ -1.52
PDB1YBR221C ADY4Q05955 493 aa5.54□□□□□ -1.52
PDB1YBR221C SEC10Q06245 871 aa5.54□□□□□ -1.52
PDB1YBR221C VPS74Q06385 345 aa5.54□□□□□ -1.52
PDB1YBR221C YPR196WQ06595 470 aa5.54□□□□□ -1.52
PDB1YBR221C STP4Q07351 490 aa5.54□□□□□ -1.52
PDB1YBR221C TMA16Q08687 178 aa5.54□□□□□ -1.52
PDB1YBR221C THI21Q08975 551 aa5.54□□□□□ -1.52
PDB1YBR221C SRO7Q12038 1033 aa5.54□□□□□ -1.52
PDB1YBR221C SUL2Q12325 893 aa5.54□□□□□ -1.52
PDB1YBR221C NUM1Q00402 2748 aa5.53□□□□□ -1.52
PDB1YBR221C GAL80P04387 435 aa5.53□□□□□ -1.52
PDB1YBR221C RPS3P05750 240 aaKnown RBP5.53□□□□□ -1.52
PDB1YBR221C KGD1P20967 1014 aaKnown RBP5.53□□□□□ -1.52
PDB1YBR221C RNR1P21524 888 aaKnown RBP5.53□□□□□ -1.52
PDB1YBR221C VPS34P22543 875 aa5.53□□□□□ -1.52
PDB1YBR221C ARG1P22768 420 aa5.53□□□□□ -1.52
PDB1YBR221C MEK1P24719 497 aaPredicted RBP5.53□□□□□ -1.52
PDB1YBR221C GCD7P32502 381 aaPredicted RBP5.53□□□□□ -1.52
PDB1YBR221C RML2P32611 393 aa5.53□□□□□ -1.52
PDB1YBR221C SEC66P33754 206 aa5.53□□□□□ -1.52
PDB1YBR221C YKL071WP36086 256 aa5.53□□□□□ -1.52
PDB1YBR221C CCT6P39079 546 aa5.53□□□□□ -1.52
PDB1YBR221C SER3P40054 469 aa5.53□□□□□ -1.52
PDB1YBR221C LIF1P53150 421 aa5.53□□□□□ -1.52
PDB1YBR221C YNR065CP53751 1116 aa5.53□□□□□ -1.52
PDB1YBR221C NSG2P53898 299 aa5.53□□□□□ -1.52
PDB1YBR221C YDR179W-AQ03983 463 aa5.53□□□□□ -1.52
PDB1YBR221C ATG17Q06410 417 aa5.53□□□□□ -1.52
PDB1YBR221C SMC5Q08204 1093 aa5.53□□□□□ -1.52
PDB1YBR221C NDJ1Q12366 352 aa5.53□□□□□ -1.52
PDB1YBR221C MET3P08536 511 aa5.52□□□□□ -1.53
PDB1YBR221C TCP1P12612 559 aaKnown RBP5.52□□□□□ -1.53
PDB1YBR221C APA2P22108 325 aa5.52□□□□□ -1.53
PDB1YBR221C PEX1P24004 1043 aa5.52□□□□□ -1.53
PDB1YBR221C HXT3P32466 567 aaKnown RBP5.52□□□□□ -1.53
PDB1YBR221C SIP1P32578 815 aa5.52□□□□□ -1.53
PDB1YBR221C SSE2P32590 693 aaKnown RBP5.52□□□□□ -1.53
PDB1YBR221C APT2P36973 181 aa5.52□□□□□ -1.53
PDB1YBR221C AHP1P38013 176 aaKnown RBP5.52□□□□□ -1.53
PDB1YBR221C GIC1P38785 314 aa5.52□□□□□ -1.53
PDB1YBR221C QNS1P38795 714 aaKnown RBP5.52□□□□□ -1.53
PDB1YBR221C RTT107P38850 1070 aa5.52□□□□□ -1.53
PDB1YBR221C NPP2P39997 493 aa5.52□□□□□ -1.53
PDB1YBR221C VFA1P40080 203 aa5.52□□□□□ -1.53
PDB1YBR221C ELO3P40319 345 aa5.52□□□□□ -1.53
PDB1YBR221C YIR007WP40566 764 aa5.52□□□□□ -1.53
PDB1YBR221C NMD5P46970 1048 aa5.52□□□□□ -1.53
PDB1YBR221C TAH11P47112 604 aa5.52□□□□□ -1.53
PDB1YBR221C YGR149WP48236 432 aa5.52□□□□□ -1.53
PDB1YBR221C FMS1P50264 508 aa5.52□□□□□ -1.53
PDB1YBR221C BIO3P50277 480 aa5.52□□□□□ -1.53
PDB1YBR221C YNL181WP53878 407 aa5.52□□□□□ -1.53
PDB1YBR221C BOP3P53958 396 aa5.52□□□□□ -1.53
PDB1YBR221C ADE12P80210 433 aaKnown RBP5.52□□□□□ -1.53
PDB1YBR221C HAP5Q02516 242 aa5.52□□□□□ -1.53
PDB1YBR221C YPL108WQ02872 168 aaPredicted RBP5.52□□□□□ -1.53
PDB1YBR221C YDR444WQ04093 687 aa5.52□□□□□ -1.53
PDB1YBR221C BUD22Q04347 519 aaKnown RBP5.52□□□□□ -1.53
PDB1YBR221C APC4Q04601 652 aa5.52□□□□□ -1.53
PDB1YBR221C SMA2Q04658 369 aa5.52□□□□□ -1.53
PDB1YBR221C GFD1Q04839 188 aaKnown RBP5.52□□□□□ -1.53
PDB1YBR221C INM2Q05533 292 aa5.52□□□□□ -1.53
PDB1YBR221C RRG8Q06109 277 aa5.52□□□□□ -1.53
PDB1YBR221C GMC2Q06201 188 aa5.52□□□□□ -1.53
PDB1YBR221C NRT1Q08485 598 aa5.52□□□□□ -1.53
PDB1YBR221C SLP1Q12232 587 aa5.52□□□□□ -1.53
PDB1YBR221C SFG1Q12507 346 aa5.52□□□□□ -1.53
PDB1YBR221C RAD7P06779 565 aa5.51□□□□□ -1.53
PDB1YBR221C RNR2P09938 399 aaKnown RBP5.51□□□□□ -1.53
PDB1YBR221C GAL3P13045 520 aa5.51□□□□□ -1.53
PDB1YBR221C SAR1P20606 190 aaKnown RBP5.51□□□□□ -1.53
PDB1YBR221C YIH1P25637 258 aa5.51□□□□□ -1.53
PDB1YBR221C SPR1P32603 445 aa5.51□□□□□ -1.53
PDB1YBR221C PET127P32606 800 aa5.51□□□□□ -1.53
PDB1YBR221C BCS1P32839 456 aa5.51□□□□□ -1.53
PDB1YBR221C RGT1P32862 1170 aa5.51□□□□□ -1.53
PDB1YBR221C UBC6P33296 250 aaPredicted RBP5.51□□□□□ -1.53
PDB1YBR221C TFA2P36145 328 aa5.51□□□□□ -1.53
PDB1YBR221C TAT1P38085 619 aa5.51□□□□□ -1.53
PDB1YBR221C YBR139WP38109 508 aa5.51□□□□□ -1.53
PDB1YBR221C APN2P38207 520 aa5.51□□□□□ -1.53
PDB1YBR221C SWC5P38326 303 aa5.51□□□□□ -1.53
PDB1YBR221C SAP30P38429 201 aa5.51□□□□□ -1.53
PDB1YBR221C MIP6P38760 659 aaKnown RBP5.51□□□□□ -1.53
PDB1YBR221C RFC4P40339 323 aaKnown RBP5.51□□□□□ -1.53
PDB1YBR221C FKH2P41813 862 aa5.51□□□□□ -1.53
PDB1YBR221C CTR1P49573 406 aa5.51□□□□□ -1.53
PDB1YBR221C MPS2P53159 387 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms