RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	BSC2	Q05611	235 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	YPR022C	Q12139	1133 aa		5.59	□□□□□ -1.51
ATG12	YBR217W	BRR1	Q99177	341 aa	Predicted RBP	5.59	□□□□□ -1.51
ATG12	YBR217W	AI3	P03877	415 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	RIP1	P08067	215 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	not detected
ATG12	YBR217W	FUN30	P31380	1131 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	COX13	P32799	129 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	APT2	P36973	181 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	YBR062C	P38239	180 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	BMT2	P38278	337 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	BEM4	P39011	633 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	SCS2	P40075	244 aa	Known RBP	5.58	□□□□□ -1.52
ATG12	YBR217W	MET18	P40469	1032 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	APQ12	P40532	138 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	MNT3	P40549	630 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	TDA10	P42938	290 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	NOP19	P53317	196 aa	Predicted RBP	5.58	□□□□□ -1.52
ATG12	YBR217W	SDH1	Q00711	640 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	RRN11	Q04712	507 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	OMS1	Q06668	471 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	YOL019W	Q08157	551 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	IRC13	Q08630	104 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	GLE1	Q12315	538 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	SEC39	Q12745	709 aa		5.58	□□□□□ -1.52
ATG12	YBR217W	PNO1	Q99216	274 aa	Known RBP	5.58	□□□□□ -1.52
ATG12	YBR217W	TRP3	P00937	484 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	DST1	P07273	309 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	BCY1	P07278	416 aa	Known RBP	5.57	□□□□□ -1.52
ATG12	YBR217W	BUB2	P26448	306 aa	Predicted RBP	5.57	□□□□□ -1.52
ATG12	YBR217W	ADE1	P27616	306 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	RPC19	P28000	142 aa	Known RBP	5.57	□□□□□ -1.52
ATG12	YBR217W	RTG1	P32607	177 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	BCK2	P33306	851 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	BZZ1	P38822	633 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	MNL1	P38888	796 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	AXL2	P38928	823 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	YER158C	P40095	573 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	UBP6	P43593	499 aa	Known RBP	5.57	□□□□□ -1.52
ATG12	YBR217W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.57	□□□□□ -1.52	not detected
ATG12	YBR217W	IBA57	P47158	497 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	TRM9	P49957	279 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	MPS1	P54199	764 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	PRO2	P54885	456 aa	Known RBP	5.57	□□□□□ -1.52
ATG12	YBR217W	SED5	Q01590	340 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	YPL109C	Q02981	657 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	MET31	Q03081	177 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	YMR111C	Q04461	462 aa	Predicted RBP	5.57	□□□□□ -1.52
ATG12	YBR217W	ERF2	Q06551	359 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	GYP1	Q08484	637 aa		5.57	□□□□□ -1.52
ATG12	YBR217W	LEU9	Q12166	604 aa	Known RBP	5.57	□□□□□ -1.52
ATG12	YBR217W	HXK2	P04807	486 aa	Known RBP	5.56	□□□□□ -1.52
ATG12	YBR217W	PRP2	P20095	876 aa	Predicted RBP	5.56	□□□□□ -1.52
ATG12	YBR217W	NPP1	P25353	742 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	PET112	P33893	541 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	TAF14	P35189	244 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	YKR078W	P36158	585 aa	Known RBP	5.56	□□□□□ -1.52
ATG12	YBR217W	UBS1	P38290	277 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	HSM3	P38348	480 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	MAD2	P40958	196 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	ALR2	P43553	858 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	MET12	P46151	657 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	TAF6	P53040	516 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	YGR053C	P53234	283 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	YNL010W	P53981	241 aa	Known RBP	5.56	□□□□□ -1.52
ATG12	YBR217W	REX2	P54964	269 aa	Known RBP	5.56	□□□□□ -1.52
ATG12	YBR217W	GIP3	Q03016	1276 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	ESA1	Q08649	445 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	MMT2	Q08970	484 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	SLF1	Q12034	447 aa	Known RBP	5.56	□□□□□ -1.52
ATG12	YBR217W	NOT5	Q12514	560 aa	Predicted RBP	5.56	□□□□□ -1.52
ATG12	YBR217W	YCL012C	Q8J0M4	134 aa		5.56	□□□□□ -1.52
ATG12	YBR217W	OCA4	P25366	362 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	CHA1	P25379	360 aa	Known RBP	5.55	□□□□□ -1.52
ATG12	YBR217W	ERG1	P32476	496 aa	Known RBP	5.55	□□□□□ -1.52
ATG12	YBR217W	CDC5	P32562	705 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	PTC1	P35182	281 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	YRO2	P38079	344 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	CTP1	P38152	299 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	YBR071W	P38243	211 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	FTH1	P38310	465 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	PAC11	P40960	533 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	MEP2	P41948	499 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	PTR3	P43606	678 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	TRS85	P46944	698 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	BIO3	P50277	480 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	MRM2	P53123	320 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	YNL140C	P53910	189 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	TRS23	Q03784	219 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	SHE9	Q04172	456 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	GLO2	Q05584	274 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	GIC2	Q06648	383 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	RRP40	Q08285	240 aa	Known RBP	5.55	□□□□□ -1.52
ATG12	YBR217W	FRE7	Q12333	620 aa		5.55	□□□□□ -1.52
ATG12	YBR217W	AI4	P03878	556 aa		5.54	□□□□□ -1.52
ATG12	YBR217W	KAR1	P11927	433 aa		5.54	□□□□□ -1.52
ATG12	YBR217W	GCD2	P12754	651 aa	Predicted RBP	5.54	□□□□□ -1.52
ATG12	YBR217W	BAS1	P22035	811 aa		5.54	□□□□□ -1.52
ATG12	YBR217W	DBR1	P24309	405 aa	Known RBP	5.54	□□□□□ -1.52
ATG12	YBR217W	MGR1	P25573	417 aa		5.54	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms