RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	VPS17	P32913	551 aa		4.54	□□□□□ -1.68
YPK3	YBR028C	VPS52	P39904	641 aa		4.54	□□□□□ -1.68
YPK3	YBR028C	CSM2	P40465	213 aa		4.54	□□□□□ -1.68
YPK3	YBR028C	SYG1	P40528	902 aa		4.54	□□□□□ -1.68
YPK3	YBR028C	MNP1	P53163	194 aa	Predicted RBP	4.54	□□□□□ -1.68
YPK3	YBR028C	YLR281C	Q05863	155 aa		4.54	□□□□□ -1.68
YPK3	YBR028C	BNA5	Q05979	453 aa		4.54	□□□□□ -1.68
YPK3	YBR028C	AMD1	P15274	810 aa	Known RBP	4.53	□□□□□ -1.68
YPK3	YBR028C	YCR051W	P25631	222 aa		4.53	□□□□□ -1.68
YPK3	YBR028C	AFG1	P32317	509 aa		4.53	□□□□□ -1.68
YPK3	YBR028C	GCS1	P35197	352 aa		4.53	□□□□□ -1.68
YPK3	YBR028C	SSU1	P41930	458 aa		4.53	□□□□□ -1.68
YPK3	YBR028C	OCA1	P50946	238 aa	Predicted RBP	4.53	□□□□□ -1.68
YPK3	YBR028C	SEC5	P89102	971 aa		4.53	□□□□□ -1.68
YPK3	YBR028C	ERB1	Q04660	807 aa	Known RBP	4.53	□□□□□ -1.68
YPK3	YBR028C	IVY1	Q04934	453 aa		4.53	□□□□□ -1.68
YPK3	YBR028C	SIL1	Q08199	421 aa		4.53	□□□□□ -1.68
YPK3	YBR028C	KEL3	Q08979	651 aa	Predicted RBP	4.53	□□□□□ -1.68
YPK3	YBR028C	CFT2	Q12102	859 aa	Predicted RBP	4.53	□□□□□ -1.68
YPK3	YBR028C	RKM5	Q12367	367 aa		4.53	□□□□□ -1.68
YPK3	YBR028C	CDC23	P16522	626 aa		4.53	□□□□□ -1.69
YPK3	YBR028C	SEC62	P21825	274 aa		4.53	□□□□□ -1.69
YPK3	YBR028C	YCR007C	P25354	239 aa		4.53	□□□□□ -1.69
YPK3	YBR028C	IDH2	P28241	369 aa	Known RBP	4.53	□□□□□ -1.69
YPK3	YBR028C	RAD14	P28519	371 aa		4.53	□□□□□ -1.69
YPK3	YBR028C	SEC1	P30619	724 aa	Known RBP	4.53	□□□□□ -1.69
YPK3	YBR028C	VMA8	P32610	256 aa	Known RBP	4.53	□□□□□ -1.69
YPK3	YBR028C	FRE1	P32791	686 aa		4.53	□□□□□ -1.69
YPK3	YBR028C	ROY1	Q04847	553 aa		4.53	□□□□□ -1.69
YPK3	YBR028C	SPS4	P09937	338 aa		4.52	□□□□□ -1.69
YPK3	YBR028C	GLK1	P17709	500 aa	Known RBP	4.52	□□□□□ -1.69
YPK3	YBR028C	URA7	P28274	579 aa	Known RBP	4.52	□□□□□ -1.69
YPK3	YBR028C	THI2	P38141	450 aa		4.52	□□□□□ -1.69
YPK3	YBR028C	YTA12	P40341	825 aa		4.52	□□□□□ -1.69
YPK3	YBR028C	YJL068C	P40363	299 aa		4.52	□□□□□ -1.69
YPK3	YBR028C	RMT2	Q03305	412 aa		4.52	□□□□□ -1.69
YPK3	YBR028C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
YPK3	YBR028C	BRR1	Q99177	341 aa	Predicted RBP	4.52	□□□□□ -1.69
YPK3	YBR028C	RHO2	P06781	192 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	HOM3	P10869	527 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	ATP10	P18496	279 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	TRS65	P32893	560 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	HCS1	P34243	683 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	RSC1	P53236	928 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	GPI1	P53306	609 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	RLI1	Q03195	608 aa	Known RBP	4.51	□□□□□ -1.69
YPK3	YBR028C	SOV1	Q04748	898 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	SYO1	Q07395	620 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	YEH2	Q07950	538 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	YAP7	Q08182	245 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	NRT1	Q08485	598 aa		4.51	□□□□□ -1.69
YPK3	YBR028C	CLC1	P17891	233 aa		4.5	□□□□□ -1.69
YPK3	YBR028C	DBF4	P32325	704 aa		4.5	□□□□□ -1.69
YPK3	YBR028C	YME2	P32843	850 aa		4.5	□□□□□ -1.69
YPK3	YBR028C	SIP2	P34164	415 aa	Known RBP	4.5	□□□□□ -1.69
YPK3	YBR028C	POP1	P41812	875 aa		4.5	□□□□□ -1.69
YPK3	YBR028C	NUP53	Q03790	475 aa		4.5	□□□□□ -1.69
YPK3	YBR028C	AFI1	Q99222	893 aa		4.5	□□□□□ -1.69
YPK3	YBR028C	MRS3	P10566	314 aa		4.49	□□□□□ -1.69
YPK3	YBR028C	REC107	P21651	314 aa		4.49	□□□□□ -1.69
YPK3	YBR028C	CLB1	P24868	471 aa		4.49	□□□□□ -1.69
YPK3	YBR028C	RIM2	P38127	377 aa		4.49	□□□□□ -1.69
YPK3	YBR028C	RRP3	P38712	501 aa	Known RBP	4.49	□□□□□ -1.69
YPK3	YBR028C	BZZ1	P38822	633 aa		4.49	□□□□□ -1.69
YPK3	YBR028C	YGL082W	P53155	381 aa		4.49	□□□□□ -1.69
YPK3	YBR028C	LSC1	P53598	329 aa	Known RBP	4.49	□□□□□ -1.69
YPK3	YBR028C	KAP120	Q02932	1032 aa		4.49	□□□□□ -1.69
YPK3	YBR028C	BUB3	P26449	341 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	ERV1	P27882	189 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	FUN19	P28003	413 aa	Predicted RBP	4.48	□□□□□ -1.69
YPK3	YBR028C	NIP100	P33420	868 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	SRP72	P38688	640 aa	Known RBP	4.48	□□□□□ -1.69
YPK3	YBR028C	FAU1	P40099	211 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	DIM1	P41819	318 aa	Known RBP	4.48	□□□□□ -1.69
YPK3	YBR028C	TFG2	P41896	400 aa	Predicted RBP	4.48	□□□□□ -1.69
YPK3	YBR028C	RPM2	Q02773	1202 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	YDL009C	Q12210	107 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	SMC6	Q12749	1114 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	RIP1	P08067	215 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	CCT2	P39076	527 aa	Known RBP	4.48	□□□□□ -1.69
YPK3	YBR028C	IKS1	P47042	667 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	CUL3	P53202	744 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	AIM32	Q04689	311 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	MRPL51	Q06090	140 aa	Predicted RBP	4.48	□□□□□ -1.69
YPK3	YBR028C	LSP1	Q12230	341 aa	Known RBP	4.48	□□□□□ -1.69
YPK3	YBR028C	ISA2	Q12425	185 aa		4.48	□□□□□ -1.69
YPK3	YBR028C	GPH1	P06738	902 aa	Known RBP	4.47	□□□□□ -1.69
YPK3	YBR028C	YNK1	P36010	153 aa	Known RBP	4.47	□□□□□ -1.69
YPK3	YBR028C	TCB2	P48231	1178 aa		4.47	□□□□□ -1.69
YPK3	YBR028C	FMS1	P50264	508 aa		4.47	□□□□□ -1.69
YPK3	YBR028C	YML6	P51998	286 aa		4.47	□□□□□ -1.69
YPK3	YBR028C	RMD9	P53140	646 aa	Known RBP	4.47	□□□□□ -1.69
YPK3	YBR028C	RRP45	Q05636	305 aa	Known RBP	4.47	□□□□□ -1.69
YPK3	YBR028C	HCR1	Q05775	265 aa	Known RBP	4.47	□□□□□ -1.69
YPK3	YBR028C	SEC63	P14906	663 aa		4.46	□□□□□ -1.7
YPK3	YBR028C	YCR022C	P25620	114 aa		4.46	□□□□□ -1.7
YPK3	YBR028C	PIM1	P36775	1133 aa		4.46	□□□□□ -1.7
YPK3	YBR028C	SAD1	P43589	448 aa		4.46	□□□□□ -1.7
YPK3	YBR028C	URB2	P47108	1174 aa		4.46	□□□□□ -1.7
YPK3	YBR028C	COS5	P47187	383 aa		4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms