RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 IGBP1P78318 339 aa6.62□□□□□ -1.35
LINC00560-201ENST00000564593 LBX2Q6XYB7 198 aa6.62□□□□□ -1.35
LINC00560-201ENST00000564593 ZNF574Q6ZN55 896 aaPredicted RBP6.62□□□□□ -1.35
LINC00560-201ENST00000564593 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC00560-201ENST00000564593 DDX1Q92499 740 aaKnown RBP6.62□□□□□ -1.35
LINC00560-201ENST00000564593 ADAMTS10Q9H324 1103 aa6.62□□□□□ -1.35
LINC00560-201ENST00000564593 CAAP1Q9H8G2 361 aa6.62□□□□□ -1.35
LINC00560-201ENST00000564593 SLAMF8Q9P0V8 285 aa6.62□□□□□ -1.35
LINC00560-201ENST00000564593 TNFRSF10DQ9UBN6 386 aa6.62□□□□□ -1.35
LINC00560-201ENST00000564593 MYO1BO43795 1136 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 PRNPP04156 253 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 IGFALSP35858 605 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 STAT3P40763 770 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 ANAPC15P60006 121 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 DUSP4Q13115 394 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 JAMLQ86YT9 394 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 MAP6Q96JE9 813 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 ALPK1Q96QP1 1244 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 CCDC39Q9UFE4 941 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 TIMM13Q9Y5L4 95 aaPredicted RBP6.61□□□□□ -1.35
LINC00560-201ENST00000564593 C7orf72A4D263 438 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 GSG1L2A8MUP6 293 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 SOX5P35711 763 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 FLT3P36888 993 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 NEK4P51957 841 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 AMPD3Q01432 767 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 ZNF460Q14592 562 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 CT47A1Q5JQC4 288 aaPredicted RBP6.61□□□□□ -1.35
LINC00560-201ENST00000564593 RALGPS1Q5JS13 557 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 OGFOD2Q6N063 350 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 VSIG10LQ86VR7 867 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 AHI1Q8N157 1196 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 PPM1KQ8N3J5 372 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 UBR7Q8N806 425 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 FLCNQ8NFG4 579 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 LINC01599Q8WXQ3 324 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 HHIPL1Q96JK4 782 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 CHAMP1Q96JM3 812 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 ALG1Q9BT22 464 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 G6PC3Q9BUM1 346 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 MAPRE3Q9UPY8 281 aa6.61□□□□□ -1.35
LINC00560-201ENST00000564593 FADS2P1A8MWK0 482 aa6.6□□□□□ -1.35
LINC00560-201ENST00000564593 B4E1Z4 1266 aa6.6□□□□□ -1.35
LINC00560-201ENST00000564593 NPHS1O60500 1241 aa6.6□□□□□ -1.35
LINC00560-201ENST00000564593 ZGLP1P0C6A0 271 aa6.6□□□□□ -1.35
LINC00560-201ENST00000564593 JMJD7P0C870 316 aa6.6□□□□□ -1.35
LINC00560-201ENST00000564593 KIZQ2M2Z5 673 aa6.6□□□□□ -1.35
LINC00560-201ENST00000564593 UBE2R2Q712K3 238 aaPredicted RBP6.6□□□□□ -1.35
LINC00560-201ENST00000564593 WFDC3Q8IUB2 231 aa6.6□□□□□ -1.35
LINC00560-201ENST00000564593 ZC3H7AQ8IWR0 971 aaKnown RBP6.6□□□□□ -1.35
LINC00560-201ENST00000564593 EBF1Q9UH73 591 aa6.6□□□□□ -1.35
LINC00560-201ENST00000564593 TMEM59LQ9UK28 342 aa6.6□□□□□ -1.35
LINC00560-201ENST00000564593 ANGEL1Q9UNK9 670 aaKnown RBP6.6□□□□□ -1.35
LINC00560-201ENST00000564593 SRGAP2CP0DJJ0 459 aa6.59□□□□□ -1.35
LINC00560-201ENST00000564593 BCL6P41182 706 aa6.59□□□□□ -1.35
LINC00560-201ENST00000564593 CEBPAP49715 358 aaPredicted RBP6.59□□□□□ -1.35
LINC00560-201ENST00000564593 RTP1P59025 263 aa6.59□□□□□ -1.35
LINC00560-201ENST00000564593 RPL11P62913 178 aaKnown RBP6.59□□□□□ -1.35
LINC00560-201ENST00000564593 PAK1Q13153 545 aa6.59□□□□□ -1.35
LINC00560-201ENST00000564593 LSAMPQ13449 338 aa6.59□□□□□ -1.35
LINC00560-201ENST00000564593 CFAP100Q494V2 611 aa6.59□□□□□ -1.35
LINC00560-201ENST00000564593 RNF180Q86T96 592 aa6.59□□□□□ -1.35
LINC00560-201ENST00000564593 PRDM7Q9NQW5 492 aa6.59□□□□□ -1.35
LINC00560-201ENST00000564593 BTG4Q9NY30 223 aa6.59□□□□□ -1.35
LINC00560-201ENST00000564593 A0A1W2PQ45 241 aaPredicted RBP6.58□□□□□ -1.36
LINC00560-201ENST00000564593 A0A1W2PQY0 241 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 FAM83GA6ND36 823 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 ARVCFO00192 962 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 USP2O75604 605 aaPredicted RBP6.58□□□□□ -1.36
LINC00560-201ENST00000564593 SOD2P04179 222 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 POU3F2P20265 443 aaPredicted RBP6.58□□□□□ -1.36
LINC00560-201ENST00000564593 KIR2DL1P43626 348 aaPredicted RBP6.58□□□□□ -1.36
LINC00560-201ENST00000564593 KIR2DL2P43627 348 aaPredicted RBP6.58□□□□□ -1.36
LINC00560-201ENST00000564593 GTF2A2P52657 109 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 HK2P52789 917 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 ZCCHC8Q6NZY4 707 aaKnown RBP6.58□□□□□ -1.36
LINC00560-201ENST00000564593 CEP128Q6ZU80 1094 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 SLCO6A1Q86UG4 719 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 PCDH19Q8TAB3 1148 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 LEO1Q8WVC0 666 aaPredicted RBP6.58□□□□□ -1.36
LINC00560-201ENST00000564593 JMJD8Q96S16 334 aa6.58□□□□□ -1.36
LINC00560-201ENST00000564593 KPNA6O60684 536 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 KCNA6P17658 529 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 NFKB2Q00653 900 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 PCBP1Q15365 356 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC00560-201ENST00000564593 SLC14A2Q15849 920 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 PIK3R6Q5UE93 754 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 CDCA2Q69YH5 1023 aaPredicted RBP6.57□□□□□ -1.36
LINC00560-201ENST00000564593 DDX46Q7L014 1031 aaKnown RBP6.57□□□□□ -1.36
LINC00560-201ENST00000564593 DDX53Q86TM3 631 aaKnown RBP6.57□□□□□ -1.36
LINC00560-201ENST00000564593 POU5F2Q8N7G0 328 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 ANKS4BQ8N8V4 417 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 DPF3Q92784 378 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 CCDC120Q96HB5 630 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 WNK4Q96J92 1243 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 MTFR1LQ9H019 292 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 CLDND1Q9NY35 253 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 SAMD15Q9P1V8 674 aa6.57□□□□□ -1.36
LINC00560-201ENST00000564593 GULP1Q9UBP9 304 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms