RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 PPP1R11O60927 126 aaPredicted RBP6.46□□□□□ -1.38
CCDC54-201ENST00000261058 CRTAMO95727 393 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 NAT1P18440 290 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 SDSP20132 328 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 MASP1P48740 699 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 GTF2A2P52657 109 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 HK2P52789 917 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 TAF7LQ5H9L4 462 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 CEP128Q6ZU80 1094 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 NLRP10Q86W26 655 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 ABI1Q8IZP0 508 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 OXR1Q8N573 874 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 FLAD1Q8NFF5 587 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 SHISA4Q96DD7 197 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 MTA3Q9BTC8 594 aa6.46□□□□□ -1.38
CCDC54-201ENST00000261058 SLKQ9H2G2 1235 aaPredicted RBP6.46□□□□□ -1.38
CCDC54-201ENST00000261058 TIMM13Q9Y5L4 95 aaPredicted RBP6.46□□□□□ -1.38
CCDC54-201ENST00000261058 NPHS1O60500 1241 aa6.45□□□□□ -1.38
CCDC54-201ENST00000261058 POU3F2P20265 443 aaPredicted RBP6.45□□□□□ -1.38
CCDC54-201ENST00000261058 GP2P55259 537 aaKnown RBP6.45□□□□□ -1.38
CCDC54-201ENST00000261058 KIZQ2M2Z5 673 aa6.45□□□□□ -1.38
CCDC54-201ENST00000261058 TIGD5Q53EQ6 642 aa6.45□□□□□ -1.38
CCDC54-201ENST00000261058 GALNT18Q6P9A2 607 aa6.45□□□□□ -1.38
CCDC54-201ENST00000261058 NLRX1Q86UT6 975 aa6.45□□□□□ -1.38
CCDC54-201ENST00000261058 LILRA2Q8N149 483 aa6.45□□□□□ -1.38
CCDC54-201ENST00000261058 PLCD4Q9BRC7 762 aa6.45□□□□□ -1.38
CCDC54-201ENST00000261058 RASGRP1O95267 797 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 ASLP04424 464 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 KCNA6P17658 529 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 ERVFC1P60507 584 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 RPL11P62913 178 aaKnown RBP6.44□□□□□ -1.38
CCDC54-201ENST00000261058 MVKQ03426 396 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 SNX17Q15036 470 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 C21orf62-AS1Q17RA5 79 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 THNSL2Q86YJ6 484 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 JAMLQ86YT9 394 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 PLEKHO2Q8TD55 490 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 MAGEB10Q96LZ2 347 aaPredicted RBP6.44□□□□□ -1.38
CCDC54-201ENST00000261058 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.44□□□□□ -1.38
CCDC54-201ENST00000261058 IMPACTQ9P2X3 320 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 ADGRE2Q9UHX3 823 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 PCDHA2Q9Y5H9 948 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 X6R8D5 127 aa6.44□□□□□ -1.38
CCDC54-201ENST00000261058 GSG1L2A8MUP6 293 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 H7BY64 318 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 IRS4O14654 1257 aaPredicted RBP6.43□□□□□ -1.38
CCDC54-201ENST00000261058 MYO1BO43795 1136 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 PSPNO60542 156 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 BCL6P41182 706 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 LSAMPQ13449 338 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 LRRTM3Q86VH5 581 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 DHX37Q8IY37 1157 aaKnown RBP6.43□□□□□ -1.38
CCDC54-201ENST00000261058 PCDH19Q8TAB3 1148 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 RC3H2Q9HBD1 1191 aaKnown RBP6.43□□□□□ -1.38
CCDC54-201ENST00000261058 FBLN5Q9UBX5 448 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 PCDHA9Q9Y5H5 950 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 TAF6LQ9Y6J9 622 aa6.43□□□□□ -1.38
CCDC54-201ENST00000261058 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 ANKRD62A6NC57 917 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 MSL3P1P0C860 447 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 GUCY1A3Q02108 690 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 PAK1Q13153 545 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 KIR3DS1Q14943 382 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 ABHD17CQ6PCB6 329 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 RIOX2Q8IUF8 465 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 KRTAP4-12Q9BQ66 201 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 ORAI3Q9BRQ5 295 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 CRTAC1Q9NQ79 661 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 PDLIM7Q9NR12 457 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 GULP1Q9UBP9 304 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 PCDHA8Q9Y5H6 950 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 TNPO3Q9Y5L0 923 aaKnown RBP6.42□□□□□ -1.38
CCDC54-201ENST00000261058 OAS3Q9Y6K5 1087 aaKnown RBP6.42□□□□□ -1.38
CCDC54-201ENST00000261058 SOD2P04179 222 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 CKMP06732 381 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 GRK2P25098 689 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 GRK3P35626 688 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 IGFALSP35858 605 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 STAT3P40763 770 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 ZNF460Q14592 562 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 SLC14A2Q15849 920 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 HABP4Q5JVS0 413 aaKnown RBP6.42□□□□□ -1.38
CCDC54-201ENST00000261058 RNF187Q5TA31 235 aaPredicted RBP6.42□□□□□ -1.38
CCDC54-201ENST00000261058 KRT26Q7Z3Y9 468 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 RNF180Q86T96 592 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 MTDHQ86UE4 582 aaKnown RBP6.42□□□□□ -1.38
CCDC54-201ENST00000261058 MYLIPQ8WY64 445 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 DDX1Q92499 740 aaKnown RBP6.42□□□□□ -1.38
CCDC54-201ENST00000261058 ALG1Q9BT22 464 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 TARS2Q9BW92 718 aaKnown RBP6.42□□□□□ -1.38
CCDC54-201ENST00000261058 BRINP2Q9C0B6 783 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 C19orf44Q9H6X5 657 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 SPC25Q9HBM1 224 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 PPARGC1AQ9UBK2 798 aaKnown RBP6.42□□□□□ -1.38
CCDC54-201ENST00000261058 MAPRE3Q9UPY8 281 aa6.42□□□□□ -1.38
CCDC54-201ENST00000261058 B4E1Z4 1266 aa6.41□□□□□ -1.38
CCDC54-201ENST00000261058 NPTXRO95502 500 aa6.41□□□□□ -1.38
CCDC54-201ENST00000261058 PRKCAP17252 672 aa6.41□□□□□ -1.38
CCDC54-201ENST00000261058 TRHRP34981 398 aaPredicted RBP6.41□□□□□ -1.38
CCDC54-201ENST00000261058 ZCCHC8Q6NZY4 707 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms