RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MPH3P0CE00 602 aa3.38□□□□□ -1.87
VPS16YPL045W DCW1P36091 449 aa3.38□□□□□ -1.87
VPS16YPL045W RSC30P38781 883 aa3.38□□□□□ -1.87
VPS16YPL045W CSC1Q06538 782 aa3.38□□□□□ -1.87
VPS16YPL045W SPT5P27692 1063 aaKnown RBP3.38□□□□□ -1.87
VPS16YPL045W TGL3P40308 642 aa3.38□□□□□ -1.87
VPS16YPL045W MAK16P10962 306 aaPredicted RBP3.37□□□□□ -1.87
VPS16YPL045W SLI15P38283 698 aa3.37□□□□□ -1.87
VPS16YPL045W IPL1P38991 367 aa3.37□□□□□ -1.87
VPS16YPL045W PEP12P32854 288 aa3.36□□□□□ -1.87
VPS16YPL045W HTA1P04911 132 aaKnown RBP3.35□□□□□ -1.87
VPS16YPL045W HTA2P04912 132 aa3.35□□□□□ -1.87
VPS16YPL045W RPP1BP10622 106 aaKnown RBP3.35□□□□□ -1.87
VPS16YPL045W RDS2P19541 446 aaKnown RBP3.35□□□□□ -1.87
VPS16YPL045W SLY41P22215 453 aa3.35□□□□□ -1.87
VPS16YPL045W STM1P39015 273 aaKnown RBP3.35□□□□□ -1.87
VPS16YPL045W DAN4P47179 1161 aa3.35□□□□□ -1.87
VPS16YPL045W ECM23Q02710 187 aa3.35□□□□□ -1.87
VPS16YPL045W CDC73Q06697 393 aa3.35□□□□□ -1.87
VPS16YPL045W TUM1Q08686 304 aaKnown RBP3.35□□□□□ -1.87
VPS16YPL045W TFB4Q12004 338 aa3.35□□□□□ -1.87
VPS16YPL045W ITT1Q04638 464 aa3.34□□□□□ -1.87
VPS16YPL045W LAM6Q08001 693 aa3.34□□□□□ -1.87
VPS16YPL045W YOL036WQ08206 761 aa3.34□□□□□ -1.87
VPS16YPL045W YBL113CQ7M4S9 792 aa3.34□□□□□ -1.87
VPS16YPL045W MST1P07236 462 aa3.34□□□□□ -1.87
VPS16YPL045W SET4P42948 560 aa3.34□□□□□ -1.87
VPS16YPL045W ALD2P47771 506 aa3.34□□□□□ -1.87
VPS16YPL045W ERP5P38819 212 aa3.33□□□□□ -1.88
VPS16YPL045W SEC20P28791 383 aa3.33□□□□□ -1.88
VPS16YPL045W ASF1P32447 279 aa3.33□□□□□ -1.88
VPS16YPL045W KTR7P40504 517 aa3.33□□□□□ -1.88
VPS16YPL045W YPP1P46951 817 aa3.33□□□□□ -1.88
VPS16YPL045W PEX21P50091 288 aa3.33□□□□□ -1.88
VPS16YPL045W YEL023CP39992 682 aa3.32□□□□□ -1.88
VPS16YPL045W GTT3P39996 337 aa3.32□□□□□ -1.88
VPS16YPL045W NAF1P53919 492 aaKnown RBP3.32□□□□□ -1.88
VPS16YPL045W YNL115CP53925 644 aa3.32□□□□□ -1.88
VPS16YPL045W MSC6Q08818 692 aaKnown RBP3.32□□□□□ -1.88
VPS16YPL045W TRL1P09880 827 aaKnown RBP3.32□□□□□ -1.88
VPS16YPL045W TRM1P15565 570 aaKnown RBP3.32□□□□□ -1.88
VPS16YPL045W UBX7P38349 436 aa3.32□□□□□ -1.88
VPS16YPL045W TPS3P38426 1054 aaKnown RBP3.32□□□□□ -1.88
VPS16YPL045W MCM16Q12262 181 aa3.32□□□□□ -1.88
VPS16YPL045W GAL2P13181 574 aa3.31□□□□□ -1.88
VPS16YPL045W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
VPS16YPL045W RTF1P53064 558 aa3.31□□□□□ -1.88
VPS16YPL045W RRP15Q06511 250 aaPredicted RBP3.31□□□□□ -1.88
VPS16YPL045W ATE1P16639 503 aa3.31□□□□□ -1.88
VPS16YPL045W YTA7P40340 1379 aa3.31□□□□□ -1.88
VPS16YPL045W ISF1P32488 338 aa3.3□□□□□ -1.88
VPS16YPL045W YHL050CP38721 697 aa3.3□□□□□ -1.88
VPS16YPL045W OCA5P38738 679 aa3.3□□□□□ -1.88
VPS16YPL045W YHR219WP38900 624 aa3.3□□□□□ -1.88
VPS16YPL045W YEL077CQ3E7X8 1277 aa3.3□□□□□ -1.88
VPS16YPL045W MDJ2P42834 146 aa3.3□□□□□ -1.88
VPS16YPL045W POL32P47110 350 aa3.3□□□□□ -1.88
VPS16YPL045W PUS6P53294 404 aa3.3□□□□□ -1.88
VPS16YPL045W CWC15Q03772 175 aaKnown RBP3.3□□□□□ -1.88
VPS16YPL045W KAR5Q04746 504 aa3.3□□□□□ -1.88
VPS16YPL045W ENV9Q08651 330 aa3.3□□□□□ -1.88
VPS16YPL045W YRR1Q12172 810 aa3.3□□□□□ -1.88
VPS16YPL045W PTC4P38089 393 aa3.29□□□□□ -1.88
VPS16YPL045W EMP47P43555 445 aa3.29□□□□□ -1.88
VPS16YPL045W WHI5Q12416 295 aa3.29□□□□□ -1.88
VPS16YPL045W MSB4Q12317 492 aa3.29□□□□□ -1.88
VPS16YPL045W KEX2P13134 814 aa3.28□□□□□ -1.88
VPS16YPL045W GRS1P38088 690 aaKnown RBP3.28□□□□□ -1.88
VPS16YPL045W ERF2Q06551 359 aa3.28□□□□□ -1.88
VPS16YPL045W PPX1P38698 397 aa3.27□□□□□ -1.89
VPS16YPL045W PUF6Q04373 656 aaKnown RBP3.27□□□□□ -1.89
VPS16YPL045W DPL1Q05567 589 aa3.27□□□□□ -1.89
VPS16YPL045W SVF1Q05515 481 aa3.27□□□□□ -1.89
VPS16YPL045W PHO87P25360 923 aa3.26□□□□□ -1.89
VPS16YPL045W SEC8P32855 1065 aa3.26□□□□□ -1.89
VPS16YPL045W BOL3P39724 118 aa3.26□□□□□ -1.89
VPS16YPL045W ROM1P53046 1155 aa3.26□□□□□ -1.89
VPS16YPL045W TBF1Q02457 562 aa3.26□□□□□ -1.89
VPS16YPL045W PNP1Q05788 311 aa3.26□□□□□ -1.89
VPS16YPL045W MPC54Q08550 464 aa3.26□□□□□ -1.89
VPS16YPL045W STB3Q12427 513 aa3.26□□□□□ -1.89
VPS16YPL045W SPC42P36094 363 aa3.26□□□□□ -1.89
VPS16YPL045W BRN1P38170 754 aa3.26□□□□□ -1.89
VPS16YPL045W MID1P41821 548 aa3.26□□□□□ -1.89
VPS16YPL045W THI12P42883 340 aa3.26□□□□□ -1.89
VPS16YPL045W THI5P43534 340 aa3.26□□□□□ -1.89
VPS16YPL045W THI11P47183 340 aa3.26□□□□□ -1.89
VPS16YPL045W ACS2P52910 683 aaKnown RBP3.26□□□□□ -1.89
VPS16YPL045W OYE2Q03558 400 aaKnown RBP3.26□□□□□ -1.89
VPS16YPL045W THI13Q07748 340 aa3.26□□□□□ -1.89
VPS16YPL045W FRA1Q07825 749 aa3.26□□□□□ -1.89
VPS16YPL045W HAP4P14064 554 aa3.25□□□□□ -1.89
VPS16YPL045W ATG1P53104 897 aa3.25□□□□□ -1.89
VPS16YPL045W RGA2Q06407 1009 aa3.25□□□□□ -1.89
VPS16YPL045W YDL206WQ12424 762 aa3.25□□□□□ -1.89
VPS16YPL045W NUD1P32336 851 aa3.25□□□□□ -1.89
VPS16YPL045W STE20Q03497 939 aaKnown RBP3.25□□□□□ -1.89
VPS16YPL045W ISU2Q12056 156 aa3.25□□□□□ -1.89
VPS16YPL045W TRP5P00931 707 aaKnown RBP3.24□□□□□ -1.89
VPS16YPL045W FUR4P05316 633 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms